annotate test-data/blastxml/blast.xml @ 8:ad4b9d7eae6a draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 9a243c616a4a3156347e38fdb5f35863ae5133f9
author iuc
date Tue, 29 Nov 2016 10:55:30 -0500
parents 7342f467507b
children
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1 <?xml version="1.0"?>
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
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3 <BlastOutput>
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4 <BlastOutput_program>blastp</BlastOutput_program>
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5 <BlastOutput_version>BLASTP 2.2.28+</BlastOutput_version>
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
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7 <BlastOutput_db>/usr/local/syncdb/community/nr/nr</BlastOutput_db>
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
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9 <BlastOutput_query-def>Merlin_1</BlastOutput_query-def>
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10 <BlastOutput_query-len>229</BlastOutput_query-len>
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11 <BlastOutput_param>
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12 <Parameters>
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13 <Parameters_matrix>BLOSUM62</Parameters_matrix>
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14 <Parameters_expect>0.001</Parameters_expect>
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15 <Parameters_gap-open>11</Parameters_gap-open>
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16 <Parameters_gap-extend>1</Parameters_gap-extend>
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17 <Parameters_filter>F</Parameters_filter>
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18 </Parameters>
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19 </BlastOutput_param>
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20 <BlastOutput_iterations>
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21 <Iteration>
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22 <Iteration_iter-num>1</Iteration_iter-num>
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23 <Iteration_query-ID>Query_1</Iteration_query-ID>
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24 <Iteration_query-def>Merlin_1</Iteration_query-def>
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25 <Iteration_query-len>229</Iteration_query-len>
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26 <Iteration_hits>
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27 <Hit>
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28 <Hit_num>1</Hit_num>
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29 <Hit_id>gi|422934611|ref|YP_007004572.1|</Hit_id>
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30 <Hit_def>hypothetical protein [Enterobacteria phage ime09] &gt;gi|339791394|gb|AEK12451.1| hypothetical protein [Enterobacteria phage ime09]</Hit_def>
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31 <Hit_accession>YP_007004572</Hit_accession>
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32 <Hit_len>685</Hit_len>
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33 <Hit_hsps>
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34 <Hsp>
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35 <Hsp_num>1</Hsp_num>
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36 <Hsp_bit-score>197.593</Hsp_bit-score>
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37 <Hsp_score>501</Hsp_score>
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38 <Hsp_evalue>3.74548e-55</Hsp_evalue>
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39 <Hsp_query-from>2</Hsp_query-from>
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40 <Hsp_query-to>229</Hsp_query-to>
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41 <Hsp_hit-from>474</Hsp_hit-from>
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42 <Hsp_hit-to>684</Hsp_hit-to>
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43 <Hsp_query-frame>0</Hsp_query-frame>
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44 <Hsp_hit-frame>0</Hsp_hit-frame>
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45 <Hsp_identity>106</Hsp_identity>
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46 <Hsp_positive>154</Hsp_positive>
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47 <Hsp_gaps>21</Hsp_gaps>
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48 <Hsp_align-len>230</Hsp_align-len>
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49 <Hsp_qseq>LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR</Hsp_qseq>
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50 <Hsp_hseq>LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK</Hsp_hseq>
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51 <Hsp_midline>L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+</Hsp_midline>
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52 </Hsp>
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53 </Hit_hsps>
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54 </Hit>
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55 <Hit>
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56 <Hit_num>2</Hit_num>
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57 <Hit_id>gi|330858714|ref|YP_004415089.1|</Hit_id>
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58 <Hit_def>hypothetical protein Shfl2p198 [Shigella phage Shfl2] &gt;gi|327397648|gb|AEA73150.1| hypothetical protein Shfl2p198 [Shigella phage Shfl2]</Hit_def>
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59 <Hit_accession>YP_004415089</Hit_accession>
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60 <Hit_len>685</Hit_len>
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61 <Hit_hsps>
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62 <Hsp>
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63 <Hsp_num>1</Hsp_num>
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64 <Hsp_bit-score>197.593</Hsp_bit-score>
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65 <Hsp_score>501</Hsp_score>
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66 <Hsp_evalue>4.31042e-55</Hsp_evalue>
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67 <Hsp_query-from>2</Hsp_query-from>
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68 <Hsp_query-to>229</Hsp_query-to>
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69 <Hsp_hit-from>474</Hsp_hit-from>
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70 <Hsp_hit-to>684</Hsp_hit-to>
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71 <Hsp_query-frame>0</Hsp_query-frame>
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72 <Hsp_hit-frame>0</Hsp_hit-frame>
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73 <Hsp_identity>106</Hsp_identity>
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74 <Hsp_positive>154</Hsp_positive>
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75 <Hsp_gaps>21</Hsp_gaps>
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76 <Hsp_align-len>230</Hsp_align-len>
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77 <Hsp_qseq>LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR</Hsp_qseq>
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78 <Hsp_hseq>LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGSHSAYANED-----------AETSVGMVIKGAERIKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYMMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK</Hsp_hseq>
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79 <Hsp_midline>L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ + +D + ++G VI GAE ++VIVPG L+ +P EAEVILPRG LLKINK++T + K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+</Hsp_midline>
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80 </Hsp>
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81 </Hit_hsps>
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82 </Hit>
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83 <Hit>
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84 <Hit_num>3</Hit_num>
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85 <Hit_id>gi|228861509|ref|YP_002854530.1|</Hit_id>
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86 <Hit_def>alt.-2 hypothetical protein [Enterobacteria phage RB14] &gt;gi|227438525|gb|ACP30838.1| alt.-2 hypothetical protein [Enterobacteria phage RB14]</Hit_def>
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87 <Hit_accession>YP_002854530</Hit_accession>
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88 <Hit_len>685</Hit_len>
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89 <Hit_hsps>
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90 <Hsp>
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91 <Hsp_num>1</Hsp_num>
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92 <Hsp_bit-score>197.593</Hsp_bit-score>
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93 <Hsp_score>501</Hsp_score>
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94 <Hsp_evalue>4.35388e-55</Hsp_evalue>
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95 <Hsp_query-from>2</Hsp_query-from>
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96 <Hsp_query-to>229</Hsp_query-to>
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97 <Hsp_hit-from>474</Hsp_hit-from>
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98 <Hsp_hit-to>684</Hsp_hit-to>
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99 <Hsp_query-frame>0</Hsp_query-frame>
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100 <Hsp_hit-frame>0</Hsp_hit-frame>
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101 <Hsp_identity>108</Hsp_identity>
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102 <Hsp_positive>152</Hsp_positive>
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103 <Hsp_gaps>21</Hsp_gaps>
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104 <Hsp_align-len>230</Hsp_align-len>
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105 <Hsp_qseq>LDKGTLLYRGQKLDLPTFEHNAENKLFYFRNYVSTSLKPLIFGEFGRMFMALDDDTTIYTAETPDDYNRFANPEDIIDIGATQKDSFDDNNNDGTSINIGKQVNLGFVISGAENVRVIVPGSLTEYPEEAEVILPRGTLLKINKITTQVDKRS--NKFMVEGSIVPPSEQIDESVEIYDGDLFMETGEVVKLSGFMQFVNESAYDEEQNQMAAEILSGFLDIDDMPRKFR</Hsp_qseq>
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106 <Hsp_hseq>LPPGTTLYRGQEVTFKTLRHNIENKMFYFKNFVSTSLKPNIFGEHGKNYMALDDSGAVFSGEGEGS----VDAEDLMHMGS-----------HSTYANEDAETSVGMVIKGAERVKVIVPGHLSGFPSEAEVILPRGILLKINKVSTYFMKETAYNKYLIEGTIVPPSEQLEESV--YDGDHLMETGEVRPMAGFNQFLVEES--KEEENEVSQILASLVNINGMSKKFK</Hsp_hseq>
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107 <Hsp_midline>L GT LYRGQ++ T HN ENK+FYF+N+VSTSLKP IFGE G+ +MALDD +++ E + ED++ +G+ T N + ++G VI GAE V+VIVPG L+ +P EAEVILPRG LLKINK++T K + NK+++EG+IVPPSEQ++ESV YDGD METGEV ++GF QF+ E + +E+ ++IL+ ++I+ M +KF+</Hsp_midline>
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108 </Hsp>
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109 </Hit_hsps>
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110 </Hit>
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111 </Iteration_hits>
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112 <Iteration_stat>
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113 <Statistics>
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114 <Statistics_db-num>48094830</Statistics_db-num>
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115 <Statistics_db-len>17186091396</Statistics_db-len>
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116 <Statistics_hsp-len>143</Statistics_hsp-len>
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117 <Statistics_eff-space>886533640716</Statistics_eff-space>
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118 <Statistics_kappa>0.041</Statistics_kappa>
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119 <Statistics_lambda>0.267</Statistics_lambda>
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120 <Statistics_entropy>0.14</Statistics_entropy>
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121 </Statistics>
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122 </Iteration_stat>
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123 </Iteration>
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124 <Iteration>
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125 <Iteration_iter-num>2</Iteration_iter-num>
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126 <Iteration_query-ID>Query_2</Iteration_query-ID>
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127 <Iteration_query-def>Merlin_2</Iteration_query-def>
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128 <Iteration_query-len>95</Iteration_query-len>
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129 <Iteration_hits>
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130 <Hit>
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131 <Hit_num>1</Hit_num>
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132 <Hit_id>gi|308814559|ref|YP_003934833.1|</Hit_id>
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133 <Hit_def>hypothetical protein SP18_gp210 [Shigella phage SP18] &gt;gi|308206151|gb|ADO19550.1| hypothetical protein SP18gp210 [Shigella phage SP18]</Hit_def>
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134 <Hit_accession>YP_003934833</Hit_accession>
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135 <Hit_len>107</Hit_len>
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136 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
137 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
138 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
139 <Hsp_bit-score>79.337</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
140 <Hsp_score>194</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
141 <Hsp_evalue>9.23754e-17</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
142 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
143 <Hsp_query-to>95</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
144 <Hsp_hit-from>12</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
145 <Hsp_hit-to>107</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
146 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
147 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
148 <Hsp_identity>42</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
149 <Hsp_positive>56</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
150 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
151 <Hsp_align-len>96</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
152 <Hsp_qseq>MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKENVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFRK</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
153 <Hsp_hseq>MKSSFRFNGQELVVENVIPASEEFDSAVGNELRRVFGEDKKFDLRPVENFVNSEQTENIFNGVVTGQLESEAPIAITVFAKKEVVMTAAGFISFRK</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
154 <Hsp_midline>MKS FR NG E+VVE+V+P S EF+ V EL+++ G DKK P+ F E + VVTGQLE E +A+ EV++T F+ FRK</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
155 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
156 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
157 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
158 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
159 <Hit_num>2</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
160 <Hit_id>gi|456351278|ref|YP_007501230.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
161 <Hit_def>hypothetical protein [Salmonella phage S16] &gt;gi|448913695|gb|AGE48199.1| hypothetical protein [Salmonella phage S16]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
162 <Hit_accession>YP_007501230</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
163 <Hit_len>106</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
164 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
165 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
166 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
167 <Hsp_bit-score>77.7962</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
168 <Hsp_score>190</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
169 <Hsp_evalue>2.9568e-16</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
170 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
171 <Hsp_query-to>94</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
172 <Hsp_hit-from>11</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
173 <Hsp_hit-to>106</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
174 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
175 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
176 <Hsp_identity>42</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
177 <Hsp_positive>57</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
178 <Hsp_gaps>2</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
179 <Hsp_align-len>96</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
180 <Hsp_qseq>MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKE-NVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFR</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
181 <Hsp_hseq>MKSILRIASTEIVIENAKPDSREFNEAAYELLQELYGTDKNFQLHPLPRFGVKEGQADNYISGVLSGNLVGEVPCAISIIAEDNQISNVVGFVVFR</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
182 <Hsp_midline>MKSI RI EIV+E+ P S EFNE ++ L+++ G DK Q P+ RFG+KE D YI V++G L GE A+ + D I + FV+FR</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
183 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
184 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
185 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
186 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
187 <Hit_num>3</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
188 <Hit_id>gi|408387127|gb|AFU64136.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
189 <Hit_def>hypothetical protein [Salmonella phage STML-198]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
190 <Hit_accession>AFU64136</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
191 <Hit_len>96</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
192 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
193 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
194 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
195 <Hsp_bit-score>77.0258</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
196 <Hsp_score>188</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
197 <Hsp_evalue>5.19436e-16</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
198 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
199 <Hsp_query-to>94</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
200 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
201 <Hsp_hit-to>96</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
202 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
203 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
204 <Hsp_identity>42</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
205 <Hsp_positive>57</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
206 <Hsp_gaps>2</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
207 <Hsp_align-len>96</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
208 <Hsp_qseq>MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKE-NVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFR</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
209 <Hsp_hseq>MKSILRIASTETVIENVKPDSREFNEAAYELLQELYGTDKNFQLHPLPRFGVKEGQADNYISGVLSGNLVGEVPCAISIIAEDNQISNVVGFVVFR</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
210 <Hsp_midline>MKSI RI E V+E+V P S EFNE ++ L+++ G DK Q P+ RFG+KE D YI V++G L GE A+ + D I + FV+FR</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
211 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
212 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
213 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
214 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
215 <Hit_num>4</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
216 <Hit_id>gi|314121774|ref|YP_004063893.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
217 <Hit_def>Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7] &gt;gi|313151531|gb|ADR32587.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage vB_EcoM-VR7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
218 <Hit_accession>YP_004063893</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
219 <Hit_len>96</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
220 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
221 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
222 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
223 <Hsp_bit-score>76.6406</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
224 <Hsp_score>187</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
225 <Hsp_evalue>7.7684e-16</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
226 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
227 <Hsp_query-to>95</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
228 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
229 <Hsp_hit-to>96</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
230 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
231 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
232 <Hsp_identity>40</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
233 <Hsp_positive>56</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
234 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
235 <Hsp_align-len>96</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
236 <Hsp_qseq>MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKENVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFRK</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
237 <Hsp_hseq>MKSSFRFNGQELVVENVIPASEEFDSAVGNELRRVFGEDKKFDLRPVENFVNSEQTENIFNGIVTGQLESEAPIAITVFVKKEAVMTVAGFISFRK</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
238 <Hsp_midline>MKS FR NG E+VVE+V+P S EF+ V EL+++ G DKK P+ F E + +VTGQLE E +A+ E ++T+ F+ FRK</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
239 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
240 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
241 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
242 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
243 <Hit_num>5</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
244 <Hit_id>gi|161622625|ref|YP_001595321.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
245 <Hit_def>Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98] &gt;gi|52139951|gb|AAU29321.1| Alt.-3 conserved hypothetical protein [Enterobacteria phage JS98]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
246 <Hit_accession>YP_001595321</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
247 <Hit_len>96</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
248 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
249 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
250 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
251 <Hsp_bit-score>75.485</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
252 <Hsp_score>184</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
253 <Hsp_evalue>2.41009e-15</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
254 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
255 <Hsp_query-to>95</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
256 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
257 <Hsp_hit-to>96</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
258 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
259 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
260 <Hsp_identity>39</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
261 <Hsp_positive>55</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
262 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
263 <Hsp_align-len>96</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
264 <Hsp_qseq>MKSIFRINGVEIVVEDVVPMSYEFNEVVFKELKKILG-DKKLQSTPIGRFGMKENVDTYIESVVTGQLEGEFSVAVQTVENDEVILTLPAFVIFRK</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
265 <Hsp_hseq>MKSAFRFNGQELVVENVIPASEEFDSAVGNELRRVFGEDKQFDLRPIENFSQPEQTENIFNGVVTGQLESEAPISITVFVKKQPLMTAAGFISFRK</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
266 <Hsp_midline>MKS FR NG E+VVE+V+P S EF+ V EL+++ G DK+ PI F E + VVTGQLE E +++ + ++T F+ FRK</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
267 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
268 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
269 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
270 </Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
271 <Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
272 <Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
273 <Statistics_db-num>48094830</Statistics_db-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
274 <Statistics_db-len>17186091396</Statistics_db-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
275 <Statistics_hsp-len>65</Statistics_hsp-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
276 <Statistics_eff-space>421797823380</Statistics_eff-space>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
277 <Statistics_kappa>0.041</Statistics_kappa>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
278 <Statistics_lambda>0.267</Statistics_lambda>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
279 <Statistics_entropy>0.14</Statistics_entropy>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
280 </Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
281 </Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
282 </Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
283 <Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
284 <Iteration_iter-num>3</Iteration_iter-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
285 <Iteration_query-ID>Query_3</Iteration_query-ID>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
286 <Iteration_query-def>Merlin_3</Iteration_query-def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
287 <Iteration_query-len>314</Iteration_query-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
288 <Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
289 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
290 <Hit_num>1</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
291 <Hit_id>gi|456351277|ref|YP_007501229.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
292 <Hit_def>baseplate subunit [Salmonella phage S16] &gt;gi|347466342|gb|AEO97128.1| baseplate subunit [Salmonella phage S16] &gt;gi|408387126|gb|AFU64135.1| tail assembly [Salmonella phage STML-198]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
293 <Hit_accession>YP_007501229</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
294 <Hit_len>305</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
295 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
296 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
297 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
298 <Hsp_bit-score>573.548</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
299 <Hsp_score>1477</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
300 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
301 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
302 <Hsp_query-to>302</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
303 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
304 <Hsp_hit-to>302</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
305 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
306 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
307 <Hsp_identity>266</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
308 <Hsp_positive>289</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
309 <Hsp_gaps>0</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
310 <Hsp_align-len>302</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
311 <Hsp_qseq>MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVIN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
312 <Hsp_hseq>MYTLDEFKNQAANIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTQGLTNIITSGTRDLTRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLIDFFNMVYPQSGLMIYSVKIPENRLSHEMDFMHNSPNIKITGRDLEPLTVSFRMDPEASNYRAMQDWVNAVQDPVTGLRALPTDVEADIQVNLHARNGIPHTVIMFTGCIPISCGAPELTYEGDNQIAVFDVTFAYRVMQAGAVGRQAAIDWLEDKTVDSIDKINPDLSLNGSLSRLSRLGGAGGGISNIVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
313 <Hsp_midline>M TLDEFKNQA NIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFT GLT+IIT+GT+ L RKSGVSKYLIGAMSNRVVQSLLGEFEVGTYL+DFFNM YPQSGLMIYSVKIPENRLSHEMDF HNSPNI+ITGR+L+PLT+SFRMDPEASNYRAMQDWVN+VQDPVTGLRALPTDVEADIQVNLHARNG+PHTVIMFTGC+P++CGAPELTYEGDNQIAVFDVTFAYRVMQ GAVGRQAA+DW+ED+ V+SI IN ++SLNGSLSRLSRLGGA GG+S+++N</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
314 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
315 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
316 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
317 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
318 <Hit_num>2</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
319 <Hit_id>gi|311993189|ref|YP_004010055.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
320 <Hit_def>gp54 base plate tail tube initiator [Enterobacteria phage CC31] &gt;gi|284178027|gb|ADB81693.1| gp54 base plate tail tube initiator [Enterobacteria phage CC31]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
321 <Hit_accession>YP_004010055</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
322 <Hit_len>320</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
323 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
324 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
325 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
326 <Hsp_bit-score>539.265</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
327 <Hsp_score>1388</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
328 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
329 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
330 <Hsp_query-to>314</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
331 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
332 <Hsp_hit-to>320</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
333 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
334 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
335 <Hsp_identity>258</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
336 <Hsp_positive>286</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
337 <Hsp_gaps>6</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
338 <Hsp_align-len>320</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
339 <Hsp_qseq>MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINST------RNSTSKILGL</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
340 <Hsp_hseq>MLNLDEFNNQVMNVDFQRTNMFSCVFATSPSAKSQLLLDQFGGMLYNNLPVSGDWLGLSQGEFTQGLTSIITAGTQELVRKSGVSKYLIGAMTNRVVQSLLGEFEVGTYLLDFFNMAFPTSGLMIYSAKIPDNRLSHETDWLHNSPNIRITGRELEPLTLSFRMDSEASNWRAMQDWVNSVQDPVTGLRALPVDVEADIQVNLHARNGLPHTVCMFTGCVPVSCGSPEFTWDGDNQIAVFDVQFAYRVMQVGAVGRQAAADWVEDRLVHAIGNISDDMGLDSSLSRLSRLGGAAGGITQMGNAIGRKTGMWNSTSKILGL</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
341 <Hsp_midline>ML LDEF NQ N+DFQRTNMFSCVFAT+PSAKSQ LLDQFGGML+NNLP++ DWLGL+QGEFT GLTSIITAGTQ+LVRKSGVSKYLIGAM+NRVVQSLLGEFEVGTYLLDFFNMA+P SGLMIYS KIP+NRLSHE D+ HNSPNIRITGREL+PLT+SFRMD EASN+RAMQDWVNSVQDPVTGLRALP DVEADIQVNLHARNGLPHTV MFTGCVPV+CG+PE T++GDNQIAVFDV FAYRVMQ GAVGRQAA DW+EDR V++I I+ +M L+ SLSRLSRLGGAAGG++ + N+ NSTSKILGL</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
342 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
343 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
344 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
345 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
346 <Hit_num>3</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
347 <Hit_id>gi|589889940|ref|YP_009005476.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
348 <Hit_def>baseplate subunit [Enterobacter phage PG7] &gt;gi|583927853|gb|AHI61115.1| baseplate subunit [Enterobacter phage PG7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
349 <Hit_accession>YP_009005476</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
350 <Hit_len>320</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
351 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
352 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
353 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
354 <Hsp_bit-score>535.798</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
355 <Hsp_score>1379</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
356 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
357 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
358 <Hsp_query-to>314</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
359 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
360 <Hsp_hit-to>320</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
361 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
362 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
363 <Hsp_identity>257</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
364 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
365 <Hsp_gaps>6</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
366 <Hsp_align-len>320</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
367 <Hsp_qseq>MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINST------RNSTSKILGL</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
368 <Hsp_hseq>MLNLDEFNNQVMNVDFQRTNMFSCVFATTPSAKSQLLLDQFGGMLYNNLPVSGDWLGLSQGEFTQGITSIITAGTQELVRKSGVSKYLIGAMTNRVVQSLLGEFEVGTYLLDFFNMAFPTSGLMIYSAKIPDNRLSHETDWLHNSPNIRITGRELEPLTLSFRMDSEASNWRAMQDWVNSVQDPVTGLRALPVDVEADIQVNLHARNGLPHTVCMFTGCVPVSCGSPEFTWDGDNQIAVFDVQFAYRVMQVGAVGRQAAADWVEDRLVHAIGNISDDMGLDPSLSRLSRLGGAGGGITQMGNAIGRKTGMWNSTSKILGL</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
369 <Hsp_midline>ML LDEF NQ N+DFQRTNMFSCVFATTPSAKSQ LLDQFGGML+NNLP++ DWLGL+QGEFT G+TSIITAGTQ+LVRKSGVSKYLIGAM+NRVVQSLLGEFEVGTYLLDFFNMA+P SGLMIYS KIP+NRLSHE D+ HNSPNIRITGREL+PLT+SFRMD EASN+RAMQDWVNSVQDPVTGLRALP DVEADIQVNLHARNGLPHTV MFTGCVPV+CG+PE T++GDNQIAVFDV FAYRVMQ GAVGRQAA DW+EDR V++I I+ +M L+ SLSRLSRLGGA GG++ + N+ NSTSKILGL</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
370 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
371 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
372 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
373 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
374 <Hit_num>4</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
375 <Hit_id>gi|314121773|ref|YP_004063892.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
376 <Hit_def>gp54 baseplate subunit [Enterobacteria phage vB_EcoM-VR7] &gt;gi|313151530|gb|ADR32586.1| gp54 baseplate subunit [Enterobacteria phage vB_EcoM-VR7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
377 <Hit_accession>YP_004063892</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
378 <Hit_len>319</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
379 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
380 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
381 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
382 <Hsp_bit-score>479.174</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
383 <Hsp_score>1232</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
384 <Hsp_evalue>6.96493e-167</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
385 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
386 <Hsp_query-to>313</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
387 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
388 <Hsp_hit-to>313</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
389 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
390 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
391 <Hsp_identity>218</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
392 <Hsp_positive>264</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
393 <Hsp_gaps>0</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
394 <Hsp_align-len>313</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
395 <Hsp_qseq>MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINSTRNSTSKILG</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
396 <Hsp_hseq>MFTLQEFQTQAINIDLQRNNLFSVVFATAPSSKSQNLLDQFGGALFSNLPVNSDWFGLTQGDLTQGITTLVTAGTQKLIRKSGISKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPTAGLLVHSVKLPDNTLNYEMDLNHNAPNIKITGREYSPLVLSFRMDSEAGNFRAFNDWVNSVQDPVTQLRALPEDVEADIQVNLHSRNGLPHTVVMLTGCVPVSVSAPELSYEGDNQIATFDVTFAYRVMSTGAVGRNAALEWLEDKVIKGVSGISSDNNLNAEVAKLSRLSGAQSGLTSLYNTFTGSGRAVSG</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
397 <Hsp_midline>M TL EF+ QA NID QR N+FS VFAT PS+KSQ LLDQFGG LF+NLP+N+DW GLTQG+ T G+T+++TAGTQ+L+RKSG+SKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYP +GL+++SVK+P+N L++EMD NHN+PNI+ITGRE PL +SFRMD EA N+RA DWVNSVQDPVT LRALP DVEADIQVNLH+RNGLPHTV+M TGCVPV+ APEL+YEGDNQIA FDVTFAYRVM TGAVGR AAL+W+ED+ + ++GI+S+ +LN +++LSRL GA GL+ + N+ S + G</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
398 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
399 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
400 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
401 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
402 <Hit_num>5</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
403 <Hit_id>gi|308814558|ref|YP_003934832.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
404 <Hit_def>baseplate tail tube initiator [Shigella phage SP18] &gt;gi|308206150|gb|ADO19549.1| baseplate tail tube initiator [Shigella phage SP18]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
405 <Hit_accession>YP_003934832</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
406 <Hit_len>314</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
407 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
408 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
409 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
410 <Hsp_bit-score>478.404</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
411 <Hsp_score>1230</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
412 <Hsp_evalue>1.05147e-166</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
413 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
414 <Hsp_query-to>303</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
415 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
416 <Hsp_hit-to>303</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
417 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
418 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
419 <Hsp_identity>216</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
420 <Hsp_positive>261</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
421 <Hsp_gaps>0</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
422 <Hsp_align-len>303</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
423 <Hsp_qseq>MLTLDEFKNQAGNIDFQRTNMFSCVFATTPSAKSQQLLDQFGGMLFNNLPLNNDWLGLTQGEFTSGLTSIITAGTQQLVRKSGVSKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPQSGLMIYSVKIPENRLSHEMDFNHNSPNIRITGRELDPLTISFRMDPEASNYRAMQDWVNSVQDPVTGLRALPTDVEADIQVNLHARNGLPHTVIMFTGCVPVACGAPELTYEGDNQIAVFDVTFAYRVMQTGAVGRQAALDWIEDRAVNSITGINSEMSLNGSLSRLSRLGGAAGGLSHVINS</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
424 <Hsp_hseq>MFTLQEFQTQAINIDLQRNNLFSVVFATAPSSKSQNLLDQFGGALFSNLPVNSDWFGLTQGDLTQGITTLVTAGTQKLIRKSGISKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYPTAGLLVHSVKLPDNTLNYEMDLNHNAPNIKITGREYSPLVLSFRMDSEAGNFRAFNDWVNSVQDPVTQLRALPEDVEADIQVNLHSRNGLPHTVVMLTGCVPVSVSAPELSYEGDNQIATFDVTFAYRVMSTGAVGRAAALEWLEDKVIKGVSGISSDNNLNAEVAKLSRLSGAQSGLTSLYNT</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
425 <Hsp_midline>M TL EF+ QA NID QR N+FS VFAT PS+KSQ LLDQFGG LF+NLP+N+DW GLTQG+ T G+T+++TAGTQ+L+RKSG+SKYLIGAMSNRVVQSLLGEFEVGTYLLDFFNMAYP +GL+++SVK+P+N L++EMD NHN+PNI+ITGRE PL +SFRMD EA N+RA DWVNSVQDPVT LRALP DVEADIQVNLH+RNGLPHTV+M TGCVPV+ APEL+YEGDNQIA FDVTFAYRVM TGAVGR AAL+W+ED+ + ++GI+S+ +LN +++LSRL GA GL+ + N+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
426 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
427 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
428 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
429 </Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
430 <Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
431 <Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
432 <Statistics_db-num>48094830</Statistics_db-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
433 <Statistics_db-len>17186091396</Statistics_db-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
434 <Statistics_hsp-len>147</Statistics_hsp-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
435 <Statistics_eff-space>1689397281462</Statistics_eff-space>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
436 <Statistics_kappa>0.041</Statistics_kappa>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
437 <Statistics_lambda>0.267</Statistics_lambda>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
438 <Statistics_entropy>0.14</Statistics_entropy>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
439 </Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
440 </Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
441 </Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
442 <Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
443 <Iteration_iter-num>4</Iteration_iter-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
444 <Iteration_query-ID>Query_4</Iteration_query-ID>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
445 <Iteration_query-def>Merlin_4</Iteration_query-def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
446 <Iteration_query-len>351</Iteration_query-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
447 <Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
448 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
449 <Hit_num>1</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
450 <Hit_id>gi|456351276|ref|YP_007501228.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
451 <Hit_def>baseplate subunit [Salmonella phage S16] &gt;gi|347466341|gb|AEO97127.1| baseplate subunit [Salmonella phage S16]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
452 <Hit_accession>YP_007501228</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
453 <Hit_len>350</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
454 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
455 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
456 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
457 <Hsp_bit-score>590.882</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
458 <Hsp_score>1522</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
459 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
460 <Hsp_query-from>5</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
461 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
462 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
463 <Hsp_hit-to>350</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
464 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
465 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
466 <Hsp_identity>291</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
467 <Hsp_positive>319</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
468 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
469 <Hsp_align-len>348</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
470 <Hsp_qseq>VRELDDKTDALIS-GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
471 <Hsp_hseq>VKELKDTAKELWNKGEKISAGQSSQSSKIKSTVTVQYPSERSAGNDVTGNLRVHDLYKNGLLFTAYDMNSRTSGDMRNMRLGELRRTSQDIVKSVTGKNTKQVDKIPVANILLPRSKSDVDSTSHKFNDVADSLISRGGGTATGVLSNVASTAVFGALESVTQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVHDLIAIVEIYEYFNYYSYGETGNSTFAKEVKSTLDEWYKSTFLDTLTPTGAPQNDTVFEKITSFLSNVIVVSNPTVWYVRNFGNTSKFDGKTDIFGPCQIQSIRFDKTPNGVFNGLAVAPNLPSTFTLEITMREILTLNRSSIYSEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
472 <Hsp_midline>V+EL D L + G K SAGQSSQS+KIKST+T QYPSERSAGND +G+LRVHDLYKNGLLFTAYDMNSRT+GDMR+MRLGE++RT+ +VKS+TG NT +VDKIPV NILLPRSKSDV+S SHKFNDV DSLISRGGGTATGVLSNVASTAVFG LES+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DLIAI+EIYEYFNYYSYGETG ST+AKEVKS LDEWYKSTFLDTLTP A +NDTVFEKITSFLSNVIVVSNPTVW+VRNFG TSKFDG+ ++FGPCQIQSIRFDKTPNG FNGLA+APNLPSTFTLEITMREILTLNR+S+Y+EGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
473 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
474 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
475 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
476 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
477 <Hit_num>2</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
478 <Hit_id>gi|408387125|gb|AFU64134.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
479 <Hit_def>baseplate tail tube cap [Salmonella phage STML-198]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
480 <Hit_accession>AFU64134</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
481 <Hit_len>350</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
482 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
483 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
484 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
485 <Hsp_bit-score>590.497</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
486 <Hsp_score>1521</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
487 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
488 <Hsp_query-from>5</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
489 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
490 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
491 <Hsp_hit-to>350</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
492 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
493 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
494 <Hsp_identity>291</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
495 <Hsp_positive>319</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
496 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
497 <Hsp_align-len>348</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
498 <Hsp_qseq>VRELDDKTDALIS-GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
499 <Hsp_hseq>VKELKDTAKELWNKGEKISAGQSSQSSKIKSTVTVQYPSERSAGNDVTGNLRVHDLYKNGLLFTAYDMNSRTSGDMRNMRLGELRRTSQDIVKSVTGKNTKQVDKIPVANILLPRSKSDVDSTSHKFNDVADSLISRGGGTATGVLSNVASTAVFGALESVTQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVHDLIAIVEIYEYFNYYSYGETGNSTFAKEVKSTLDEWYKSTFLDTLTPTGAPQNDTVFEKITSFLSNVIVVSNPTVWYVRNFGNTSKFDGKTDIFGPCQIQSIRFDKTPNGIFNGLAVAPNLPSTFTLEITMREILTLNRSSIYSEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
500 <Hsp_midline>V+EL D L + G K SAGQSSQS+KIKST+T QYPSERSAGND +G+LRVHDLYKNGLLFTAYDMNSRT+GDMR+MRLGE++RT+ +VKS+TG NT +VDKIPV NILLPRSKSDV+S SHKFNDV DSLISRGGGTATGVLSNVASTAVFG LES+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DLIAI+EIYEYFNYYSYGETG ST+AKEVKS LDEWYKSTFLDTLTP A +NDTVFEKITSFLSNVIVVSNPTVW+VRNFG TSKFDG+ ++FGPCQIQSIRFDKTPNG FNGLA+APNLPSTFTLEITMREILTLNR+S+Y+EGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
501 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
502 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
503 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
504 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
505 <Hit_num>3</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
506 <Hit_id>gi|311993188|ref|YP_004010054.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
507 <Hit_def>gp48 base plate tail tube cap [Enterobacteria phage CC31] &gt;gi|284178026|gb|ADB81692.1| gp48 base plate tail tube cap [Enterobacteria phage CC31]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
508 <Hit_accession>YP_004010054</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
509 <Hit_len>349</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
510 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
511 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
512 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
513 <Hsp_bit-score>559.296</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
514 <Hsp_score>1440</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
515 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
516 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
517 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
518 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
519 <Hsp_hit-to>349</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
520 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
521 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
522 <Hsp_identity>270</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
523 <Hsp_positive>310</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
524 <Hsp_gaps>2</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
525 <Hsp_align-len>351</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
526 <Hsp_qseq>MSIKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
527 <Hsp_hseq>MAIRATEILDK--AFGSGEKTSAGQSSISSTRRSTVTAQYPAERSAGNDAAGDLRVHDLYKNGLLFTAYDMSSRTTPDLRSMRQSQLSKSASSILNSLGIKNNGQVDKSPIANILLPRSKSDVESISHKFNDVGDSLMTRGNNSATGVLSNVASTAVFGALDSITQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVADLVSIIQIYEYFNYFSYGETGNSTYAKELKGQLDEWYKTTLLSPLTPDGADLNNTMFENITSFLSNVIVVTNPTVWFIRNFGKTSKFDGRAEVFGPCQIQSIRFDKTPNGQFNGLAIAPNMPSTFTLEITFREILTLNRASLYAEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
528 <Hsp_midline>M+I+ E+ DK A SG KTSAGQSS S+ +ST+TAQYP+ERSAGND +G LRVHDLYKNGLLFTAYDM+SRTT D+RSMR ++ ++A+S++ S+ N +VDK P+ NILLPRSKSDVES+SHKFNDVGDSL++RG +ATGVLSNVASTAVFG L+S+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DL++II+IYEYFNY+SYGETG STYAKE+K QLDEWYK+T L LTPD A+ N+T+FE ITSFLSNVIVV+NPTVWF+RNFG TSKFDGRAEVFGPCQIQSIRFDKTPNG FNGLAIAPN+PSTFTLEIT REILTLNRAS+YAEGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
529 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
530 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
531 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
532 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
533 <Hit_num>4</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
534 <Hit_id>gi|589889939|ref|YP_009005475.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
535 <Hit_def>baseplate subunit [Enterobacter phage PG7] &gt;gi|583927852|gb|AHI61114.1| baseplate subunit [Enterobacter phage PG7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
536 <Hit_accession>YP_009005475</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
537 <Hit_len>349</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
538 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
539 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
540 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
541 <Hsp_bit-score>536.954</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
542 <Hsp_score>1382</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
543 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
544 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
545 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
546 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
547 <Hsp_hit-to>349</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
548 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
549 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
550 <Hsp_identity>260</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
551 <Hsp_positive>305</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
552 <Hsp_gaps>2</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
553 <Hsp_align-len>351</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
554 <Hsp_qseq>MSIKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
555 <Hsp_hseq>MAIRATEILDKD--FGSGEKTSAGQSSISSTRRSTIVAQYPAQRAAGNDAAGDLRVHDLYKNGLLFTAYDMSSRTSPDLRNMRQSQLSKSASSILNSLGIKNNGQVDKSPIANILLPRSKSDVESTSHKFNDVGESLITRGNNSATGVLSNVASTAVFGALDSVTQGLMADNNEQIYNTARSMYAGADNRTKVFTWDLTPRSVADLVSIIQIYECFNYFSYGETGNSSYAKELKGQLDEWYKTTLLSPLTPDGADLNNTMFENITSFLSNVIVVTNPTVWFIRNFGKTSKFDGRTELFGPCQIQSIRFDKTPNGQFNGLAIAPNMPSTFTLEITFREILTLSRASLYAEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
556 <Hsp_midline>M+I+ E+ DK SG KTSAGQSS S+ +STI AQYP++R+AGND +G LRVHDLYKNGLLFTAYDM+SRT+ D+R+MR ++ ++A+S++ S+ N +VDK P+ NILLPRSKSDVES SHKFNDVG+SLI+RG +ATGVLSNVASTAVFG L+S+TQGLMAD+NEQIYNTARSMY GADNRTKVFTWDLTPRSV DL++II+IYE FNY+SYGETG S+YAKE+K QLDEWYK+T L LTPD A+ N+T+FE ITSFLSNVIVV+NPTVWF+RNFG TSKFDGR E+FGPCQIQSIRFDKTPNG FNGLAIAPN+PSTFTLEIT REILTL+RAS+YAEGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
557 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
558 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
559 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
560 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
561 <Hit_num>5</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
562 <Hit_id>gi|414086559|ref|YP_006986748.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
563 <Hit_def>baseplate tail tube cap [Enterobacteria phage vB_EcoM_ACG-C40] &gt;gi|383396340|gb|AFH20156.1| baseplate tail tube cap [Enterobacteria phage vB_EcoM_ACG-C40]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
564 <Hit_accession>YP_006986748</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
565 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
566 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
567 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
568 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
569 <Hsp_bit-score>494.197</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
570 <Hsp_score>1271</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
571 <Hsp_evalue>1.69091e-171</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
572 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
573 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
574 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
575 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
576 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
577 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
578 <Hsp_identity>236</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
579 <Hsp_positive>287</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
580 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
581 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
582 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR------LGEMKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
583 <Hsp_hseq>SGETISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRTMRSNYSSSSSSILRTARNTISNTVSKLSNGLISDNNSGTISKVPVANILLPRSKSDVDTSSHRFNDVQDSLITKGGGTATGVLSNMASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDEWYRSTFIEPLTPEDAVKNKTLFEKMTSSLTNVLVVSNPTIWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
584 <Hsp_midline>SG SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +R+MR + RTA + + + I+ N+ + K+PV NILLPRSKSDV++ SH+FNDV DSLI++GGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LDEWY+STF++ LTP++A KN T+FEK+TS L+NV+VVSNPT+W V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
585 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
586 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
587 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
588 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
589 <Hit_num>6</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
590 <Hit_id>gi|431809133|ref|YP_007236030.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
591 <Hit_def>phage baseplate tail tube cap (T4-like gp48) [Yersinia phage phiR1-RT] &gt;gi|398313422|emb|CCI88771.1| phage baseplate tail tube cap (T4-like gp48) [Yersinia phage phiR1-RT]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
592 <Hit_accession>YP_007236030</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
593 <Hit_len>348</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
594 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
595 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
596 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
597 <Hsp_bit-score>492.656</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
598 <Hsp_score>1267</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
599 <Hsp_evalue>3.88245e-171</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
600 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
601 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
602 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
603 <Hsp_hit-to>347</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
604 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
605 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
606 <Hsp_identity>242</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
607 <Hsp_positive>290</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
608 <Hsp_gaps>6</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
609 <Hsp_align-len>352</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
610 <Hsp_qseq>MSIKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSI-TGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
611 <Hsp_hseq>MSIRATEITEST-IKSAGISTSAGQVTQSTAIK-TIQAQFPAERASGNDSTLDLQITDLYKNGLLFTAYDFTSRTSPDLRQNR-ADIQIAAQKKPSSIFTGTKT--VQQTPVANILLPRSKSDVDNTSHKFNDVGESLVTRGGGNATGILSNMASTAVFGALESLTQGYMSDHGEQIYNTARSMYGGADNRQKVFTWDLTPRNVQDLVQIIKIYETFNYYSYGQTGSSSFAKGLKGDLDTWYKNTFLKNMTPDGANLDNTMFEQITSFLTNVIVVSNPTVWYVRNFGATSSFDGRADVFGPCQIASIRFDKSPNGHFNGLAIAPNLPSTFVLEITFREILTLNRNSLYAGGL</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
612 <Hsp_midline>MSI+ E+ + T +G+ TSAGQ +QS IK TI AQ+P+ER++GND++ L++ DLYKNGLLFTAYD SRT+ D+R R +++ A SI TGT T V + PV NILLPRSKSDV++ SHKFNDVG+SL++RGGG ATG+LSN+ASTAVFG LESLTQG M+DH EQIYNTARSMYGGADNR KVFTWDLTPR+VQDL+ II+IYE FNYYSYG+TG+S++AK +K LD WYK+TFL +TPD AN ++T+FE+ITSFL+NVIVVSNPTVW+VRNFG TS FDGRA+VFGPCQI SIRFDK+PNG+FNGLAIAPNLPSTF LEIT REILTLNR S+YA G </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
613 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
614 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
615 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
616 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
617 <Hit_num>7</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
618 <Hit_id>gi|228861125|ref|YP_002854148.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
619 <Hit_def>gp48 base plate [Enterobacteria phage RB51] &gt;gi|422934973|ref|YP_007004933.1| baseplate tail tube cap [Escherichia phage wV7] &gt;gi|227438799|gb|ACP31111.1| gp48 base plate [Enterobacteria phage RB51] &gt;gi|291290411|dbj|BAI83206.1| baseplate tail tube cap [Enterobacteria phage AR1] &gt;gi|343177527|gb|AEM00853.1| baseplate tail tube cap [Escherichia phage wV7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
620 <Hit_accession>YP_002854148</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
621 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
622 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
623 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
624 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
625 <Hsp_bit-score>491.5</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
626 <Hsp_score>1264</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
627 <Hsp_evalue>1.72752e-170</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
628 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
629 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
630 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
631 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
632 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
633 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
634 <Hsp_identity>235</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
635 <Hsp_positive>286</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
636 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
637 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
638 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR------LGEMKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
639 <Hsp_hseq>SGETISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRTMRSNYSSSSSSILRTARNTISNTVSKLSNGLISDNNSGTISKVPVANILLPRSKSDVDTSSHRFNDVQDSLITKGGGTATGVLSNMASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDEWYRSTFIEPLTPEDAIKNKTLFEKMTSSLTNVLVVSNPTIWMVKNFGATSKFDGKTEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSSFTLEITMREIITLNRASLYTGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
640 <Hsp_midline>SG SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +R+MR + RTA + + + I+ N+ + K+PV NILLPRSKSDV++ SH+FNDV DSLI++GGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LDEWY+STF++ LTP++A KN T+FEK+TS L+NV+VVSNPT+W V+NFG TSKFDG+ EVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPS+FTLEITMREI+TLNRAS+Y F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
641 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
642 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
643 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
644 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
645 <Hit_num>8</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
646 <Hit_id>gi|116326413|ref|YP_803133.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
647 <Hit_def>base plate [Enterobacteria phage RB32] &gt;gi|228861506|ref|YP_002854527.1| gp48 base plate [Enterobacteria phage RB14] &gt;gi|115344006|gb|ABI95015.1| base plate [Enterobacteria phage RB32] &gt;gi|227438522|gb|ACP30835.1| gp48 base plate [Enterobacteria phage RB14] &gt;gi|398313741|emb|CCI89088.1| phage baseplate tail tube cap (T4-like gp48) [Yersinia phage phiD1] &gt;gi|525334459|gb|AGR46141.1| baseplate tail tube cap [Yersinia phage PST]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
648 <Hit_accession>YP_803133</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
649 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
650 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
651 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
652 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
653 <Hsp_bit-score>488.419</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
654 <Hsp_score>1256</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
655 <Hsp_evalue>3.32248e-169</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
656 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
657 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
658 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
659 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
660 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
661 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
662 <Hsp_identity>237</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
663 <Hsp_positive>286</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
664 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
665 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
666 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
667 <Hsp_hseq>SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKAPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
668 <Hsp_midline>SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + S I+ N+ + K P+ NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
669 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
670 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
671 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
672 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
673 <Hit_num>9</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
674 <Hit_id>gi|639438843|ref|YP_009030800.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
675 <Hit_def>baseplate tail tube cap [Escherichia phage e11/2] &gt;gi|628971671|gb|AHY83393.1| baseplate tail tube cap [Escherichia phage e11/2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
676 <Hit_accession>YP_009030800</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
677 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
678 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
679 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
680 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
681 <Hsp_bit-score>486.878</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
682 <Hsp_score>1252</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
683 <Hsp_evalue>1.3135e-168</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
684 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
685 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
686 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
687 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
688 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
689 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
690 <Hsp_identity>236</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
691 <Hsp_positive>286</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
692 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
693 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
694 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
695 <Hsp_hseq>SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISNTVSKLSNGLISNNNSGTISKAPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
696 <Hsp_midline>SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + + I+ N+ + K P+ NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
697 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
698 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
699 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
700 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
701 <Hit_num>10</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
702 <Hit_id>gi|330858711|ref|YP_004415086.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
703 <Hit_def>putative baseplate tail tube cap [Shigella phage Shfl2] &gt;gi|422934608|ref|YP_007004569.1| phage baseplate protein [Enterobacteria phage ime09] &gt;gi|327397645|gb|AEA73147.1| putative baseplate tail tube cap [Shigella phage Shfl2] &gt;gi|339791391|gb|AEK12448.1| phage baseplate protein [Enterobacteria phage ime09]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
704 <Hit_accession>YP_004415086</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
705 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
706 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
707 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
708 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
709 <Hsp_bit-score>486.493</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
710 <Hsp_score>1251</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
711 <Hsp_evalue>1.49721e-168</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
712 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
713 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
714 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
715 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
716 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
717 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
718 <Hsp_identity>236</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
719 <Hsp_positive>284</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
720 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
721 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
722 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKR------TANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
723 <Hsp_hseq>SGEKISAGQSTKSEVATKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILSTARNTISSTVSKLSNGLISNNNSGTISKAPVANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTIWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
724 <Hsp_midline>SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR TA + + S I+ N+ + K PV NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPT+W V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
725 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
726 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
727 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
728 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
729 <Hit_num>11</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
730 <Hit_id>gi|397134210|gb|AFO10717.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
731 <Hit_def>baseplate protein [Escherichia phage ECML-134]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
732 <Hit_accession>AFO10717</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
733 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
734 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
735 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
736 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
737 <Hsp_bit-score>485.337</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
738 <Hsp_score>1248</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
739 <Hsp_evalue>4.36088e-168</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
740 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
741 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
742 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
743 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
744 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
745 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
746 <Hsp_identity>236</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
747 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
748 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
749 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
750 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
751 <Hsp_hseq>SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTGDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKSPIANTLLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
752 <Hsp_midline>SG K SAGQS++S T TAQ+P+ R++GNDT+G +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + S I+ N+ + K P+ N LLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
753 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
754 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
755 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
756 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
757 <Hit_num>12</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
758 <Hit_id>gi|9632645|ref|NP_049806.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
759 <Hit_def>gp48 baseplate tail tube cap [Enterobacteria phage T4] &gt;gi|138041|sp|P13339.3|VG48_BPT4 RecName: Full=Tail-tube assembly protein Gp48 [Enterobacteria phage T4] &gt;gi|5354269|gb|AAD42476.1|AF158101_63 gp48 baseplate tail tube cap [Enterobacteria phage T4] &gt;gi|215947|gb|AAA32539.1| tail-tube assembly protein [Enterobacteria phage T4] &gt;gi|299780554|gb|ADJ39916.1| baseplate subunit [Enterobacteria phage T4T] &gt;gi|628971799|gb|AHY83520.1| baseplate subunit [Enterobacteria phage T4] &gt;gi|628972001|gb|AHY83721.1| baseplate subunit [Enterobacteria phage T4] &gt;gi|628972192|gb|AHY83911.1| baseplate subunit [Enterobacteria phage T4]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
760 <Hit_accession>NP_049806</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
761 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
762 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
763 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
764 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
765 <Hsp_bit-score>484.567</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
766 <Hsp_score>1246</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
767 <Hsp_evalue>8.86163e-168</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
768 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
769 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
770 <Hsp_hit-from>15</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
771 <Hsp_hit-to>364</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
772 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
773 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
774 <Hsp_identity>236</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
775 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
776 <Hsp_gaps>15</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
777 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
778 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGE------MKRTANSVVKS---------ITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
779 <Hsp_hseq>SGEKISAGQSTKSEVGTKTYTAQFPTGRASGNDTTEDFQVTDLYKNGLLFTAYNMSSRDSGSLRSMRSNYSSSSSSILRTARNTISSTVSKLSNGLISNNNSGTISKSPIANILLPRSKSDVDTSSHRFNDVQESLISRGGGTATGVLSNIASTAVFGALESITQGIMADNNEQIYTTARSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAAEIKGYLDDWYRSTLIEPLSPEDAAKNKTLFEKMTSSLTNVLVVSNPTVWMVKNFGATSKFDGKTEIFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREIITLNRASLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
780 <Hsp_midline>SG K SAGQS++S T TAQ+P+ R++GNDT+ +V DLYKNGLLFTAY+M+SR +G +RSMR + RTA + + S I+ N+ + K P+ NILLPRSKSDV++ SH+FNDV +SLISRGGGTATGVLSN+ASTAVFG LES+TQG+MAD+NEQIY TARSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA E+K LD+WY+ST ++ L+P++A KN T+FEK+TS L+NV+VVSNPTVW V+NFG TSKFDG+ E+FGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREI+TLNRAS+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
781 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
782 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
783 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
784 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
785 <Hit_num>13</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
786 <Hit_id>gi|642905805|ref|YP_009037574.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
787 <Hit_def>baseplate subunit [Escherichia phage vB_EcoM_JS09] &gt;gi|642903959|gb|AIA79979.1| baseplate subunit [Escherichia phage vB_EcoM_JS09]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
788 <Hit_accession>YP_009037574</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
789 <Hit_len>369</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
790 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
791 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
792 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
793 <Hsp_bit-score>484.952</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
794 <Hsp_score>1247</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
795 <Hsp_evalue>9.36795e-168</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
796 <Hsp_query-from>19</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
797 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
798 <Hsp_hit-from>20</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
799 <Hsp_hit-to>369</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
800 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
801 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
802 <Hsp_identity>227</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
803 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
804 <Hsp_gaps>17</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
805 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
806 <Hsp_qseq>VKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT-----------------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
807 <Hsp_hseq>VSESAGQSTKTETTTKTYVAQFPTGRAAGNDSTGDFQVTDLYKNGLLFTAYNMSARDSGSLRNLRPAYAGTSSNGIISDLTDNVKDAVTKFSNGLLPAGANKSTINKTPVANILLPRSKSDVDTTSHRFNDVGDSLITKGGGTATGVLSNIASTAVFGALDSITQGLMADNNEQIYTTSRSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAQEIKSYLDEWYRSTFIEPMTPDDAVKNKTLFEKITASLTNVLVVSNPTIWMVKNFGYTSKFDGLTDVFGPCQIQSVRFDKTPNGQFNGLAVAPNLPSTFTLEITMREIITLNRSSLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
808 <Hsp_midline>V SAGQS+++ T AQ+P+ R+AGND++G +V DLYKNGLLFTAY+M++R +G +R++R ++N ++ +T G N + ++K PV NILLPRSKSDV++ SH+FNDVGDSLI++GGGTATGVLSN+ASTAVFG L+S+TQGLMAD+NEQIY T+RSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA+E+KS LDEWY+STF++ +TPD+A KN T+FEKIT+ L+NV+VVSNPT+W V+NFG TSKFDG +VFGPCQIQS+RFDKTPNG FNGLA+APNLPSTFTLEITMREI+TLNR+S+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
809 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
810 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
811 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
812 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
813 <Hit_num>14</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
814 <Hit_id>gi|32453688|ref|NP_861897.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
815 <Hit_def>baseplate subunit [Enterobacteria phage RB69] &gt;gi|32350507|gb|AAP76106.1| gp48 baseplate tail tube cap [Enterobacteria phage RB69] &gt;gi|604671902|gb|AHV82896.1| baseplate tail tube cap [Escherichia phage vB_EcoM_PhAPEC2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
816 <Hit_accession>NP_861897</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
817 <Hit_len>369</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
818 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
819 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
820 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
821 <Hsp_bit-score>484.567</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
822 <Hsp_score>1246</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
823 <Hsp_evalue>1.0678e-167</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
824 <Hsp_query-from>19</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
825 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
826 <Hsp_hit-from>20</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
827 <Hsp_hit-to>369</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
828 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
829 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
830 <Hsp_identity>226</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
831 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
832 <Hsp_gaps>17</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
833 <Hsp_align-len>350</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
834 <Hsp_qseq>VKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT-----------------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
835 <Hsp_hseq>VSESAGQSTKTETTTKTYVAQFPTGRAAGNDSTGDFQVTDLYKNGLLFTAYNMSARDSGSLRNLRPAYAGTSSNGIISDLTDNVKDAVTKFSNGLLPAGANKSTINKTPVANILLPRSKSDVDTTSHRFNDIGDSLITKGGGTATGVLSNIASTAVFGALDSITQGLMADNNEQIYTTSRSMYGGAENRTKVFTWDLTPRSTEDLMAIINIYQYFNYFSYGETGKSQYAQEIKSYLDEWYRSTFIEPMTPDDAVKNKTLFEKITASLTNVLVVSNPTIWMVKNFGHTSKFDGLTDVFGPCQIQSVRFDKTPNGQFNGLAVAPNLPSTFTLEITMREIITLNRSSLYAGTF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
836 <Hsp_midline>V SAGQS+++ T AQ+P+ R+AGND++G +V DLYKNGLLFTAY+M++R +G +R++R ++N ++ +T G N + ++K PV NILLPRSKSDV++ SH+FND+GDSLI++GGGTATGVLSN+ASTAVFG L+S+TQGLMAD+NEQIY T+RSMYGGA+NRTKVFTWDLTPRS +DL+AII IY+YFNY+SYGETG S YA+E+KS LDEWY+STF++ +TPD+A KN T+FEKIT+ L+NV+VVSNPT+W V+NFG TSKFDG +VFGPCQIQS+RFDKTPNG FNGLA+APNLPSTFTLEITMREI+TLNR+S+YA F</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
837 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
838 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
839 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
840 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
841 <Hit_num>15</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
842 <Hit_id>gi|314121772|ref|YP_004063891.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
843 <Hit_def>gp48 baseplate subunit [Enterobacteria phage vB_EcoM-VR7] &gt;gi|313151529|gb|ADR32585.1| gp48 baseplate subunit [Enterobacteria phage vB_EcoM-VR7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
844 <Hit_accession>YP_004063891</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
845 <Hit_len>368</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
846 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
847 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
848 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
849 <Hsp_bit-score>461.84</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
850 <Hsp_score>1187</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
851 <Hsp_evalue>1.08287e-158</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
852 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
853 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
854 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
855 <Hsp_hit-to>368</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
856 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
857 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
858 <Hsp_identity>228</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
859 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
860 <Hsp_gaps>21</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
861 <Hsp_align-len>369</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
862 <Hsp_qseq>IKVRELD---DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR---LGEMKRTANSV----VKSIT----------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
863 <Hsp_hseq>MKVKELDFDFDIAGLFNGGSKTSAGQS-KAAQTQATIVAQYPAERASGNDSSDDMRVNDLYKNGLLFTAYNFSSRTSPELRSDRSSQLTSLKKVSNGASFNPVKSLTSFAKSKLTGSGSTGKSFDSNAVANILLPRSKSDVESVSHRFNDVGESLITKGGGSATGILSNIASTAVFGALESVTNGVMADHGEQIYTTARSMYAGPDNRTKVYTWEMTPRSAQDLIQIVKIYEIFNYYSYGETGKSSFASELKDKIDTWYKSTFPSKRKAIDNFDGKLLGEEITSFLTNVLVVSNPTIWYIRNFGDTSSYDGRGELFGPCQIQSIRFDKSPDGHFGGLAIAPNLPSTFVLEITFREIITLNRGSLYAEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
864 <Hsp_midline>+KV+ELD D G KTSAGQS ++A+ ++TI AQYP+ER++GND+S +RV+DLYKNGLLFTAY+ +SRT+ ++RS R L +K+ +N VKS+T G+ D V NILLPRSKSDVESVSH+FNDVG+SLI++GGG+ATG+LSN+ASTAVFG LES+T G+MADH EQIY TARSMY G DNRTKV+TW++TPRS QDLI I++IYE FNYYSYGETG S++A E+K ++D WYKSTF + + E+ITSFL+NV+VVSNPT+W++RNFG TS +DGR E+FGPCQIQSIRFDK+P+G+F GLAIAPNLPSTF LEIT REI+TLNR S+YAEGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
865 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
866 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
867 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
868 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
869 <Hit_num>16</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
870 <Hit_id>gi|308814557|ref|YP_003934831.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
871 <Hit_def>baseplate tail tube cap [Shigella phage SP18] &gt;gi|308206149|gb|ADO19548.1| baseplate tail tube cap [Shigella phage SP18]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
872 <Hit_accession>YP_003934831</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
873 <Hit_len>362</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
874 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
875 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
876 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
877 <Hsp_bit-score>460.299</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
878 <Hsp_score>1183</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
879 <Hsp_evalue>3.47109e-158</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
880 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
881 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
882 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
883 <Hsp_hit-to>362</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
884 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
885 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
886 <Hsp_identity>228</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
887 <Hsp_positive>285</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
888 <Hsp_gaps>21</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
889 <Hsp_align-len>366</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
890 <Hsp_qseq>IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR---LGEMKRTANSV----VKSIT----------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
891 <Hsp_hseq>MKVKELD-IAGLFNGGSKTSAGQS-KAAQTQATIVAQYPAERASGNDSSDDMRVNDLYKNGLLFTAYNFSSRTSPELRSDRSSQLTSLKKVSNGASFNPVKSLTSFAKSKLTGAGSTGKSFDSNAVANILLPRSKSDVESVSHRFNDVGESLITKGGGSATGILSNIASTAVFGALESVTNGVMADHGEQIYTTARSMYAGPDNRTKVYTWEMTPRSAQDLIQIVKIYEIFNYYSYGETGKSSFASELKEKIDTWYKSTFKKEAIDNFDGK--LLGEEITSFLTNVLVVSNPTIWYIRNFGDTSSYDGRGELFGPCQIQSIRFDKSPDGHFGGLAIAPNLPSTFVLEITFREIITLNRGSLYAEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
892 <Hsp_midline>+KV+ELD G KTSAGQS ++A+ ++TI AQYP+ER++GND+S +RV+DLYKNGLLFTAY+ +SRT+ ++RS R L +K+ +N VKS+T G+ D V NILLPRSKSDVESVSH+FNDVG+SLI++GGG+ATG+LSN+ASTAVFG LES+T G+MADH EQIY TARSMY G DNRTKV+TW++TPRS QDLI I++IYE FNYYSYGETG S++A E+K ++D WYKSTF + K + E+ITSFL+NV+VVSNPT+W++RNFG TS +DGR E+FGPCQIQSIRFDK+P+G+F GLAIAPNLPSTF LEIT REI+TLNR S+YAEGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
893 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
894 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
895 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
896 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
897 <Hit_num>17</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
898 <Hit_id>gi|422934215|ref|YP_007004251.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
899 <Hit_def>baseplate tail tube cap [Enterobacteria phage Bp7] &gt;gi|345450724|gb|AEN93927.1| baseplate tail tube cap [Enterobacteria phage Bp7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
900 <Hit_accession>YP_007004251</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
901 <Hit_len>362</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
902 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
903 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
904 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
905 <Hsp_bit-score>458.759</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
906 <Hsp_score>1179</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
907 <Hsp_evalue>1.18966e-157</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
908 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
909 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
910 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
911 <Hsp_hit-to>362</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
912 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
913 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
914 <Hsp_identity>233</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
915 <Hsp_positive>284</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
916 <Hsp_gaps>23</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
917 <Hsp_align-len>367</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
918 <Hsp_qseq>IKVRELD-DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEM---------KRTANS----VVKSITGTNTN--KVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKND--TVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
919 <Hsp_hseq>MKVKELDFDVASLFKGGSKTSAGQSKTPA-IKTTVTAQYPAERASGNDTSTDMVLNDLYKNGLLFTAYNFSSRVSPDLRNDRSSQMTKKFSSAASKLTGNSGTYSAVKNLFGGNTKGVKFDTQALANILLPRSKSDVDSVSHKFNDVGESLITKGGGTATGILSNVASTAVFGALESVTNGVMADSGEQIYTTARSMYAGPDNRTKVFTWEMTPRNAQDLIQIIKIYEIFNYYSYGETGNSAFAGELKEKIDTWYRSTF----KKEAIDKFDGKLLGESITSFLSNVIVVSNPTIWYIRNFGDSSSYDGREDIFGPCQIQSIRFDKTPDGHFNGLAIAPNLPSTFSLEVTFREIITLNRGSLYTEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
920 <Hsp_midline>+KV+ELD D G KTSAGQS A IK+T+TAQYP+ER++GNDTS + ++DLYKNGLLFTAY+ +SR + D+R+ R +M K T NS VK++ G NT K D + NILLPRSKSDV+SVSHKFNDVG+SLI++GGGTATG+LSNVASTAVFG LES+T G+MAD EQIY TARSMY G DNRTKVFTW++TPR+ QDLI II+IYE FNYYSYGETG S +A E+K ++D WY+STF + +K D + E ITSFLSNVIVVSNPT+W++RNFG +S +DGR ++FGPCQIQSIRFDKTP+G+FNGLAIAPNLPSTF+LE+T REI+TLNR S+Y EGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
921 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
922 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
923 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
924 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
925 <Hit_num>18</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
926 <Hit_id>gi|299779141|ref|YP_003734335.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
927 <Hit_def>48 gene product [Enterobacteria phage IME08] &gt;gi|298105870|gb|ADI55514.1| gp48 baseplate tail tube cap [Enterobacteria phage IME08]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
928 <Hit_accession>YP_003734335</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
929 <Hit_len>363</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
930 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
931 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
932 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
933 <Hsp_bit-score>451.825</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
934 <Hsp_score>1161</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
935 <Hsp_evalue>7.00414e-155</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
936 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
937 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
938 <Hsp_hit-from>2</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
939 <Hsp_hit-to>363</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
940 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
941 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
942 <Hsp_identity>228</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
943 <Hsp_positive>283</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
944 <Hsp_gaps>23</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
945 <Hsp_align-len>367</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
946 <Hsp_qseq>IKVRELD-DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEM---------KRTAN----SVVKSITGTNTN--KVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKND--TVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
947 <Hsp_hseq>MKVKELDFDVASLFKGGSKTSAGQS-KAKPIQTTVTAQYPAERASGNDTSTDMVLSDLYKNGLLFTAYNFSSRVSPDLRNDRSSQMTKKFSKATGKLTGNTGGFSAVKNLFSNNSKGVKFDNQALANILLPRSKSDVDSVTHKFNDVGESLITKGGGTATGILSNVASTAVFGALESVTNGVMADSGEQIYTTARSMYAGPDNRTKVFTWEMTPRNAQDLIQIIKIYEIFNYYSYGETGNSAFAGELKEKIDTWYRSTF----KKEAIDKFDGKLLGESITSFLSNVIVVSNPTIWYIRNFGDSSSYDGREDIFGPCQIQSIRFDKTPDGHFNGLAIAPNLPSTFSLEVTFREIITLNRGSLYTEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
948 <Hsp_midline>+KV+ELD D G KTSAGQS ++ I++T+TAQYP+ER++GNDTS + + DLYKNGLLFTAY+ +SR + D+R+ R +M K T N S VK++ N+ K D + NILLPRSKSDV+SV+HKFNDVG+SLI++GGGTATG+LSNVASTAVFG LES+T G+MAD EQIY TARSMY G DNRTKVFTW++TPR+ QDLI II+IYE FNYYSYGETG S +A E+K ++D WY+STF + +K D + E ITSFLSNVIVVSNPT+W++RNFG +S +DGR ++FGPCQIQSIRFDKTP+G+FNGLAIAPNLPSTF+LE+T REI+TLNR S+Y EGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
949 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
950 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
951 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
952 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
953 <Hit_num>19</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
954 <Hit_id>gi|161622626|ref|YP_001595319.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
955 <Hit_def>gp48 baseplate tail tube cap [Enterobacteria phage JS98] &gt;gi|238695346|ref|YP_002922539.1| gp48 baseplate tail tube cap [Enterobacteria phage JS10] &gt;gi|52139949|gb|AAU29319.1| gp48 baseplate tail tube cap [Enterobacteria phage JS98] &gt;gi|220029482|gb|ACL78416.1| gp48 baseplate tail tube cap [Enterobacteria phage JS10]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
956 <Hit_accession>YP_001595319</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
957 <Hit_len>362</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
958 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
959 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
960 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
961 <Hsp_bit-score>450.669</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
962 <Hsp_score>1158</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
963 <Hsp_evalue>1.82386e-154</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
964 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
965 <Hsp_query-to>351</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
966 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
967 <Hsp_hit-to>362</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
968 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
969 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
970 <Hsp_identity>226</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
971 <Hsp_positive>282</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
972 <Hsp_gaps>19</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
973 <Hsp_align-len>365</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
974 <Hsp_qseq>IKVRELD-DKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEM---------KRTAN----SVVKSITGTNTN--KVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEGF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
975 <Hsp_hseq>MKVKEIDIDVASLFKGGSKTSAGQS-KAKPAQTTVTAQYPAERASGNDTSTDMVLNDLYKNGLLFTAYNFSSRVSPDLRNDRSSQMTKKFSKAAGKLTSNTGGFSAVKNLFSNNSKGVKFDSQALANILLPRSKSDVDSVTHKFNDVGESLITKGGGTATGILSNVASTAVFGALESVTNGVMADSGEQIYTTARSMYAGPDNRTKVFTWEMTPRNAQDLIQIIKIYEIFNYYSYGETGNSAFAGELKEKIDTWYRSTFKKEAIDNFDGK--LLGEGITSFLSNVIVVSNPTIWYIRNFGNTSSYDGREDIFGPCQIQSIRFDKTPDGHFNGLAIAPNLPSTFSLEVTFREIITLNRGSLYTEGF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
976 <Hsp_midline>+KV+E+D D G KTSAGQS ++ ++T+TAQYP+ER++GNDTS + ++DLYKNGLLFTAY+ +SR + D+R+ R +M K T+N S VK++ N+ K D + NILLPRSKSDV+SV+HKFNDVG+SLI++GGGTATG+LSNVASTAVFG LES+T G+MAD EQIY TARSMY G DNRTKVFTW++TPR+ QDLI II+IYE FNYYSYGETG S +A E+K ++D WY+STF + K + E ITSFLSNVIVVSNPT+W++RNFG TS +DGR ++FGPCQIQSIRFDKTP+G+FNGLAIAPNLPSTF+LE+T REI+TLNR S+Y EGF</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
977 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
978 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
979 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
980 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
981 <Hit_num>20</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
982 <Hit_id>gi|311992692|ref|YP_004009560.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
983 <Hit_def>gp48 baseplate tail tube cap [Acinetobacter phage Ac42] &gt;gi|298684475|gb|ADI96436.1| gp48 baseplate tail tube cap [Acinetobacter phage Ac42]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
984 <Hit_accession>YP_004009560</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
985 <Hit_len>358</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
986 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
987 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
988 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
989 <Hsp_bit-score>447.588</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
990 <Hsp_score>1150</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
991 <Hsp_evalue>2.52876e-153</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
992 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
993 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
994 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
995 <Hsp_hit-to>355</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
996 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
997 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
998 <Hsp_identity>217</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
999 <Hsp_positive>280</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1000 <Hsp_gaps>14</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1001 <Hsp_align-len>358</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1002 <Hsp_qseq>IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR---------LGEMKRTA-NSVVKSITGTNTNK-VDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1003 <Hsp_hseq>MKVKEIT-IANIVQAGTDVSAGYTNKRSEPK-TMIAQYPSERSSGNDAS-DMQISDLYRNGLLFTAYDYKSRTTPDMRGMRKREQNKVKALYEQTRTQFNRITSGITSESPKKSVSQDPVANILMPRSKSDSENINHKFNDVGDSLITKGGGTMTGAISNMASTAVFGAIESMTQGLLSDKGEQIYTTARSMYAGPENRTKVYSWELTPRTIDDLVQIIRIYEIFNFYSYGMTGNSQYAKELKSQIDEWYKKTFINNLTPEGSDRSGTMMESVTAFLSNVIVVTNPTVWFVRNFGKTTKFDGRPDVFGPAQIQSIRFDKAPDGNFRGLSIAPNMPSTFVLEVTMREILTLSRGTLYGD</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1004 <Hsp_midline>+KV+E+ + + +G SAG +++ ++ K T+ AQYPSERS+GND S +++ DLY+NGLLFTAYD SRTT DMR MR L E RT N + IT + K V + PV NIL+PRSKSD E+++HKFNDVGDSLI++GGGT TG +SN+ASTAVFG +ES+TQGL++D EQIY TARSMY G +NRTKV++W+LTPR++ DL+ II IYE FN+YSYG TG S YAKE+KSQ+DEWYK TF++ LTP+ ++++ T+ E +T+FLSNVIVV+NPTVWFVRNFG T+KFDGR +VFGP QIQSIRFDK P+GNF GL+IAPN+PSTF LE+TMREILTL+R ++Y +</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1005 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1006 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1007 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1008 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1009 <Hit_num>21</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1010 <Hit_id>gi|326536336|ref|YP_004300777.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1011 <Hit_def>gp48 baseplate tail tube cap [Acinetobacter phage 133] &gt;gi|299483417|gb|ADJ19511.1| gp48 baseplate tail tube cap [Acinetobacter phage 133]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1012 <Hit_accession>YP_004300777</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1013 <Hit_len>356</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1014 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1015 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1016 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1017 <Hsp_bit-score>438.343</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1018 <Hsp_score>1126</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1019 <Hsp_evalue>1.19665e-149</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1020 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1021 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1022 <Hsp_hit-from>13</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1023 <Hsp_hit-to>354</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1024 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1025 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1026 <Hsp_identity>210</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1027 <Hsp_positive>264</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1028 <Hsp_gaps>13</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1029 <Hsp_align-len>344</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1030 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRT-----------ANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1031 <Hsp_hseq>AGTEISAGYTKQDT-TQQTFSAQYPAERSAGNDATKTSN-GDLYRNGLLFTAYDYKARATPDMTRQRQGELDKARSLYTRISSGLADAGKRSSTQGQDKKIVKDPVANILLPRSKSDSDVVSHKFNDVQDSLITRGGGTATGILSNIASTAVFGTIESVTQGWMADKGEQIFNASRSMYNGAENRSKVYTWELTPRTLEDLVEIMKIYEIFNYYSYGMTGTSAYAKELKAYIDDWYKKTFLNNLTPEGSDKSGTAMESVTSFLSNVITVSNPTIWFVRNFGKSTKFDGRPDVFGPAQIQSIRFDKAPEGHFKGLAIAPNMPSTFVLEITMREVIALSRGSIYGE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1032 <Hsp_midline>+G + SAG + Q + T +AQYP+ERSAGND + + DLY+NGLLFTAYD +R T DM R GE+ + A++ +S T K+ K PV NILLPRSKSD + VSHKFNDV DSLI+RGGGTATG+LSN+ASTAVFG +ES+TQG MAD EQI+N +RSMY GA+NR+KV+TW+LTPR+++DL+ I++IYE FNYYSYG TGTS YAKE+K+ +D+WYK TFL+ LTP+ ++K+ T E +TSFLSNVI VSNPT+WFVRNFG ++KFDGR +VFGP QIQSIRFDK P G+F GLAIAPN+PSTF LEITMRE++ L+R S+Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1033 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1034 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1035 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1036 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1037 <Hit_num>22</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1038 <Hit_id>gi|311992948|ref|YP_004009815.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1039 <Hit_def>gp48 baseplate [Acinetobacter phage Acj61] &gt;gi|295815237|gb|ADG36163.1| gp48 baseplate [Acinetobacter phage Acj61]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1040 <Hit_accession>YP_004009815</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1041 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1042 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1043 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1044 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1045 <Hsp_bit-score>416.001</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1046 <Hsp_score>1068</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1047 <Hsp_evalue>9.51542e-141</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1048 <Hsp_query-from>5</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1049 <Hsp_query-to>348</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1050 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1051 <Hsp_hit-to>360</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1052 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1053 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1054 <Hsp_identity>203</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1055 <Hsp_positive>264</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1056 <Hsp_gaps>14</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1057 <Hsp_align-len>358</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1058 <Hsp_qseq>VRELDDKTDALIS--GVKTSAGQSSQSAKIKSTI-TAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSV---------VKSITGTNTNKVDKI--PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1059 <Hsp_hseq>VKEIVDSETNLIERIGSFVAAGRSSKEEESKTKIFEAQYPDGRAAATDSVDDARIQDLYANGLLFTAVEYKGRTTPEMTDMRGQVMKNMVDAIDQAKGVFNQLRGKSGGNKKISSAIKNPVCQILLPRSKTDTDTISHKFNDVNESLITRGNGTATGILSNLASTAVFGAVESISQGVMADHGEQIYNTSRAMYGGAENRTKTYTWELTPRTEGDLVQIIRIYELFSFFSYGVTGNSAYAKEIKGQIDDWYKKTFINNLTPEGADRSGTMMESVTSFLSNVIVVSNPTVWFIQNFGTMTTYDKHADVFGPAQISNIRFDKAPDGNFSGLAIAPNMPSTFVLEITFREILTLNRGSLYG</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1060 <Hsp_midline>V+E+ D LI G +AG+SS+ + K+ I AQYP R+A D+ R+ DLY NGLLFTA + RTT +M MR MK +++ ++ +G N I PV ILLPRSK+D +++SHKFNDV +SLI+RG GTATG+LSN+ASTAVFG +ES++QG+MADH EQIYNT+R+MYGGA+NRTK +TW+LTPR+ DL+ II IYE F+++SYG TG S YAKE+K Q+D+WYK TF++ LTP+ A+++ T+ E +TSFLSNVIVVSNPTVWF++NFGT + +D A+VFGP QI +IRFDK P+GNF+GLAIAPN+PSTF LEIT REILTLNR S+Y </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1061 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1062 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1063 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1064 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1065 <Hit_num>23</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1066 <Hit_id>gi|311993474|ref|YP_004010339.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1067 <Hit_def>gp48 baseplate tail tube cap [Acinetobacter phage Acj9] &gt;gi|295917431|gb|ADG60102.1| gp48 baseplate tail tube cap [Acinetobacter phage Acj9]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1068 <Hit_accession>YP_004010339</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1069 <Hit_len>360</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1070 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1071 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1072 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1073 <Hsp_bit-score>412.92</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1074 <Hsp_score>1060</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1075 <Hsp_evalue>1.46922e-139</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1076 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1077 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1078 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1079 <Hsp_hit-to>357</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1080 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1081 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1082 <Hsp_identity>212</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1083 <Hsp_positive>267</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1084 <Hsp_gaps>22</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1085 <Hsp_align-len>363</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1086 <Hsp_qseq>IKVRELDDKTDALIS--GVKTSAGQSSQSAKIKSTI-TAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMR-----LGEMKRTANSVVKSI---TGTNTNKVDKI--PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEA---NKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1087 <Hsp_hseq>MQIEEITD----LVSKAGSDISAGQSMRSQESETKILTAQYPAERSASVANTADVGVGQSYSNGLLFTAFEYKSRTTNDLRSMRTKAQNAAKVLRSSKSVTKAIQAVTGGNPNDPNTIKNPVANILMPRSKTDTDVTGHKFNDVGESLISRGGGTATGILSNVASTAVFGTIESVTKGAMADHGEQIYNTSRSMYAGAENRVKTYTWELTPRTYDDLTQIVKIYEIFNYLSYGMTGKSAFAKGVKDEIDKWYRKTFINPL--NEATGSNVQSTTMESVTSFLSNVIVVSNPTVWTIQNFGTASKFDGLADVFGPAQISNIRFDKAPDGQFNGLAAAPNMPSSFVLEVTFREILTLNRATIYGE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1088 <Hsp_midline>+++ E+ D L+S G SAGQS +S + ++ I TAQYP+ERSA + + V Y NGLLFTA++ SRTT D+RSMR ++ R++ SV K+I TG N N + I PV NIL+PRSK+D + HKFNDVG+SLISRGGGTATG+LSNVASTAVFG +ES+T+G MADH EQIYNT+RSMY GA+NR K +TW+LTPR+ DL I++IYE FNY SYG TG S +AK VK ++D+WY+ TF++ L +EA N T E +TSFLSNVIVVSNPTVW ++NFGT SKFDG A+VFGP QI +IRFDK P+G FNGLA APN+PS+F LE+T REILTLNRA++Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1089 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1090 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1091 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1092 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1093 <Hit_num>24</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1094 <Hit_id>gi|639438515|ref|YP_009030255.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1095 <Hit_def>baseplate subunit [Serratia phage PS2] &gt;gi|625370588|gb|AHY25448.1| baseplate subunit [Serratia phage PS2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1096 <Hit_accession>YP_009030255</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1097 <Hit_len>358</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1098 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1099 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1100 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1101 <Hsp_bit-score>411.379</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1102 <Hsp_score>1056</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1103 <Hsp_evalue>4.21058e-139</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1104 <Hsp_query-from>18</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1105 <Hsp_query-to>350</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1106 <Hsp_hit-from>20</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1107 <Hsp_hit-to>357</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1108 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1109 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1110 <Hsp_identity>201</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1111 <Hsp_positive>252</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1112 <Hsp_gaps>7</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1113 <Hsp_align-len>339</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1114 <Hsp_qseq>GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTA----NSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANK--NDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAEG</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1115 <Hsp_hseq>GETIGAGSTGQKKLIQKTLQAQFPAERSAGTDGSSDLRVNDLYRNGLLFTAYDFDARTTQALRDFRKKNNTKTVLDQWNPIKFLTNYGSTFQLNQEAVANILMPRSQSDVDNISHKFNDVGESLTGRNGGDVGKTISNMASTAVFGALESVTQGIMADKGEQVYNSARSMYAGPDNRTKIFVWNLTPRTVYDLLEILKIYEIFAYYSYGRVGYSPWAKDLKSQIDAWYKET-LTKATFDQAKGEVKDTFFEGITDFLTNVITVSNPTIWTVKNFGRTSSFDGKTDIFGPCQIQSIRFDKSPNGHFNGLAIAPNLPSTFVLEITMREIMTLNRDVLFAEG</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1116 <Hsp_midline>G AG + Q I+ T+ AQ+P+ERSAG D S LRV+DLY+NGLLFTAYD ++RTT +R R +T N + +T ++++ V NIL+PRS+SDV+++SHKFNDVG+SL R GG +SN+ASTAVFG LES+TQG+MAD EQ+YN+ARSMY G DNRTK+F W+LTPR+V DL+ I++IYE F YYSYG G S +AK++KSQ+D WYK T L T D+A DT FE IT FL+NVI VSNPT+W V+NFG TS FDG+ ++FGPCQIQSIRFDK+PNG+FNGLAIAPNLPSTF LEITMREI+TLNR ++AEG</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1117 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1118 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1119 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1120 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1121 <Hit_num>25</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1122 <Hit_id>gi|33620542|ref|NP_891751.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1123 <Hit_def>gp48 baseplate tail tube cap [Enterobacteria phage RB49] &gt;gi|33348009|gb|AAQ15410.1| gp48 baseplate tail tube cap [Enterobacteria phage RB49]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1124 <Hit_accession>NP_891751</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1125 <Hit_len>352</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1126 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1127 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1128 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1129 <Hsp_bit-score>408.683</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1130 <Hsp_score>1049</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1131 <Hsp_evalue>4.9384e-138</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1132 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1133 <Hsp_query-to>348</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1134 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1135 <Hsp_hit-to>349</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1136 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1137 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1138 <Hsp_identity>200</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1139 <Hsp_positive>260</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1140 <Hsp_gaps>13</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1141 <Hsp_align-len>354</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1142 <Hsp_qseq>IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT--------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1143 <Hsp_hseq>MKISVINDAVDSFKAGVKTSAGFTSKNKG--KTLTAQFPAERASGNDASG-YYINDLYNNGLLFTAYDYTSRTTGSLRDFR--KKKNVASGFGGSVNIAGFDLNLGGRNAAFDREAIANILLPRSQSDVDAASHKFNDVGESVISRGGGTLGGALSNMASTAVFGGIESITGGYLADHGEQIYNTARSMYAGADARTKNYVWHLTPRSIEDLRNILIIYETFLELSYGSSGISSTAKELKAEVDAWYKNTLLRKSTPEEAKRNDTLFEGITDFLSNVITVSNPTIWMISNFGKRTSFEGRSDAFGPAQISSVRLDKSPDGKFNGLAISPNLPSTFVLEVTFREILTLSRGTIFG</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1144 <Hsp_midline>+K+ ++D D+ +GVKTSAG +S++ T+TAQ+P+ER++GND SG ++DLY NGLLFTAYD SRTTG +R R + K A+ S+ G D+ + NILLPRS+SDV++ SHKFNDVG+S+ISRGGGT G LSN+ASTAVFGG+ES+T G +ADH EQIYNTARSMY GAD RTK + W LTPRS++DL I+ IYE F SYG +G S+ AKE+K+++D WYK+T L TP+EA +NDT+FE IT FLSNVI VSNPT+W + NFG + F+GR++ FGP QI S+R DK+P+G FNGLAI+PNLPSTF LE+T REILTL+R +++ </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1145 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1146 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1147 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1148 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1149 <Hit_num>26</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1150 <Hit_id>gi|238695065|ref|YP_002922259.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1151 <Hit_def>gp48 baseplate tail tube cap [Enterobacteria phage JSE] &gt;gi|220029201|gb|ACL78136.1| gp48 baseplate tail tube cap [Enterobacteria phage JSE]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1152 <Hit_accession>YP_002922259</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1153 <Hit_len>352</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1154 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1155 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1156 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1157 <Hsp_bit-score>406.757</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1158 <Hsp_score>1044</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1159 <Hsp_evalue>2.44502e-137</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1160 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1161 <Hsp_query-to>348</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1162 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1163 <Hsp_hit-to>349</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1164 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1165 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1166 <Hsp_identity>199</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1167 <Hsp_positive>259</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1168 <Hsp_gaps>13</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1169 <Hsp_align-len>354</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1170 <Hsp_qseq>IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT--------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1171 <Hsp_hseq>MKISVINDAVDSFKAGVKTSAGFTSKNKG--KTLTAQFPAERASGNDASG-YYINDLYNNGLLFTAYDYTSRTTGSLRDFR--KKKNVASGFGGSVNIAGFDLNLGGRNAAFDREAIANILLPRSQSDVDAASHKFNDVGESVISRGGGTLGGALSNMASTAVFGGIESITGGYLADHGEQIYNTARSMYAGADARTKNYVWHLTPRSIEDLRNILIIYETFLELSYGSSGISSTAKELKAEVDAWYKNTLLSKSTPAEAKRNDTLFEGITDFLSNVITVSNPTIWMISNFGKRTSFEGRSDAFGPAQISSVRLDKSPDGKFNGLAISPNLPSTFVLEVSFREILTLSRGTIFG</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1172 <Hsp_midline>+K+ ++D D+ +GVKTSAG +S++ T+TAQ+P+ER++GND SG ++DLY NGLLFTAYD SRTTG +R R + K A+ S+ G D+ + NILLPRS+SDV++ SHKFNDVG+S+ISRGGGT G LSN+ASTAVFGG+ES+T G +ADH EQIYNTARSMY GAD RTK + W LTPRS++DL I+ IYE F SYG +G S+ AKE+K+++D WYK+T L TP EA +NDT+FE IT FLSNVI VSNPT+W + NFG + F+GR++ FGP QI S+R DK+P+G FNGLAI+PNLPSTF LE++ REILTL+R +++ </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1173 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1174 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1175 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1176 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1177 <Hit_num>27</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1178 <Hit_id>gi|157311484|ref|YP_001469527.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1179 <Hit_def>gp48 baseplate tail tube cap [Enterobacteria phage Phi1] &gt;gi|149380688|gb|ABR24693.1| gp48 baseplate tail tube cap [Enterobacteria phage Phi1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1180 <Hit_accession>YP_001469527</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1181 <Hit_len>352</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1182 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1183 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1184 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1185 <Hsp_bit-score>405.601</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1186 <Hsp_score>1041</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1187 <Hsp_evalue>6.50999e-137</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1188 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1189 <Hsp_query-to>348</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1190 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1191 <Hsp_hit-to>349</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1192 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1193 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1194 <Hsp_identity>198</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1195 <Hsp_positive>259</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1196 <Hsp_gaps>13</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1197 <Hsp_align-len>354</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1198 <Hsp_qseq>IKVRELDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSIT--------GTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYA</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1199 <Hsp_hseq>MKISVINDAVDSFKAGVKTSAGFTSKNKG--KTLTAQFPAERASGNDASG-YYINDLYNNGLLFTAYDYTSRTTGSLRDFR--KKKNVASGFGGSVNIAGFDLNLGGRNAAFDREAIANILLPRSQSDVDAASHKFNDVGESVISRGGGTLGGALSNMASTAVFGGIESITGGYLADHGEQIYNTARSMYAGADARTKNYVWHLTPRSIEDLRNILIIYETFLELSYGSSGISSTAKELKAEVDAWYKNTLLRKSTPEEAKRNDTLFEGITDFLSNAITVSNPTIWMISNFGKRTSFEGRSDAFGPAQISSVRLDKSPDGKFNGLAISPNLPSTFVLEVSFREILTLSRGTIFG</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1200 <Hsp_midline>+K+ ++D D+ +GVKTSAG +S++ T+TAQ+P+ER++GND SG ++DLY NGLLFTAYD SRTTG +R R + K A+ S+ G D+ + NILLPRS+SDV++ SHKFNDVG+S+ISRGGGT G LSN+ASTAVFGG+ES+T G +ADH EQIYNTARSMY GAD RTK + W LTPRS++DL I+ IYE F SYG +G S+ AKE+K+++D WYK+T L TP+EA +NDT+FE IT FLSN I VSNPT+W + NFG + F+GR++ FGP QI S+R DK+P+G FNGLAI+PNLPSTF LE++ REILTL+R +++ </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1201 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1202 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1203 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1204 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1205 <Hit_num>28</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1206 <Hit_id>gi|401824981|gb|AFQ22671.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1207 <Hit_def>baseplate tail tube cap [Stenotrophomonas phage IME13]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1208 <Hit_accession>AFQ22671</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1209 <Hit_len>342</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1210 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1211 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1212 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1213 <Hsp_bit-score>368.237</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1214 <Hsp_score>944</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1215 <Hsp_evalue>2.03823e-122</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1216 <Hsp_query-from>8</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1217 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1218 <Hsp_hit-from>7</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1219 <Hsp_hit-to>341</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1220 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1221 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1222 <Hsp_identity>181</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1223 <Hsp_positive>241</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1224 <Hsp_gaps>13</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1225 <Hsp_align-len>345</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1226 <Hsp_qseq>LDDKTDALISGV---KTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1227 <Hsp_hseq>LDGGVQDVVGGILKGENPATGSSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALFGGLESITQGAFADRGEQVYITSRAMYAGADNRTKTYTWQLTPRNVYDLMQILIIYEMLSYYSYGAVEKSKTASQIKSTLDKAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDVFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1228 <Hsp_midline>LD ++ G+ + A SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A+FGGLES+TQG AD EQ+Y T+R+MY GADNRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD+ YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R++VFGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1229 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1230 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1231 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1232 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1233 <Hit_num>29</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1234 <Hit_id>gi|472438117|ref|YP_007677897.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1235 <Hit_def>baseplate tail tube cap [Aeromonas phage Aes012] &gt;gi|395653255|gb|AFN69810.1| baseplate tail tube cap [Aeromonas phage Aes012]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1236 <Hit_accession>YP_007677897</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1237 <Hit_len>342</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1238 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1239 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1240 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1241 <Hsp_bit-score>364.385</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1242 <Hsp_score>934</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1243 <Hsp_evalue>7.92274e-121</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1244 <Hsp_query-from>8</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1245 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1246 <Hsp_hit-from>7</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1247 <Hsp_hit-to>341</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1248 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1249 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1250 <Hsp_identity>178</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1251 <Hsp_positive>240</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1252 <Hsp_gaps>13</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1253 <Hsp_align-len>345</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1254 <Hsp_qseq>LDDKTDALISGV---KTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1255 <Hsp_hseq>LDGGVQDVVGGILKGENPATGSSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALYGGLESITQGAFADRGEQVYIASRAMYAGADNRTKTYTWQLTPRNVYDLMQILIIYEMLSYYSYGAVEKSKTASQIKSTLDKAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDMFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1256 <Hsp_midline>LD ++ G+ + A SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A++GGLES+TQG AD EQ+Y +R+MY GADNRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD+ YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R+++FGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1257 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1258 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1259 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1260 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1261 <Hit_num>30</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1262 <Hit_id>gi|310722276|ref|YP_003969100.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1263 <Hit_def>unnamed protein product [Aeromonas phage phiAS4] &gt;gi|306021119|gb|ADM79654.1| baseplate protein [Aeromonas phage phiAS4]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1264 <Hit_accession>YP_003969100</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1265 <Hit_len>342</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1266 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1267 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1268 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1269 <Hsp_bit-score>363.999</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1270 <Hsp_score>933</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1271 <Hsp_evalue>1.00609e-120</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1272 <Hsp_query-from>8</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1273 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1274 <Hsp_hit-from>11</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1275 <Hsp_hit-to>341</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1276 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1277 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1278 <Hsp_identity>177</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1279 <Hsp_positive>239</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1280 <Hsp_gaps>11</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1281 <Hsp_align-len>342</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1282 <Hsp_qseq>LDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1283 <Hsp_hseq>VQDVVGGILKGENPATG-SSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALYGGLESITQGAFADRGEQVYIASRAMYAGAENRTKTYTWQLTPRNVYDLMQILIIYEMLSYYSYGAVEKSKTASQIKSTLDKAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDVFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1284 <Hsp_midline>+ D ++ G + G SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A++GGLES+TQG AD EQ+Y +R+MY GA+NRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD+ YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R++VFGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1285 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1286 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1287 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1288 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1289 <Hit_num>31</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1290 <Hit_id>gi|109290161|ref|YP_656410.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1291 <Hit_def>gp48 base plate protein [Aeromonas phage 25] &gt;gi|423262259|ref|YP_007010858.1| baseplate tail tube cap [Aeromonas phage Aes508] &gt;gi|104345834|gb|ABF72734.1| gp48 base plate protein [Aeromonas phage 25] &gt;gi|402762137|gb|AFQ97251.1| baseplate tail tube cap [Aeromonas phage Aes508]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1292 <Hit_accession>YP_656410</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1293 <Hit_len>342</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1294 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1295 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1296 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1297 <Hsp_bit-score>362.459</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1298 <Hsp_score>929</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1299 <Hsp_evalue>3.78445e-120</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1300 <Hsp_query-from>8</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1301 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1302 <Hsp_hit-from>11</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1303 <Hsp_hit-to>341</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1304 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1305 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1306 <Hsp_identity>176</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1307 <Hsp_positive>238</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1308 <Hsp_gaps>11</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1309 <Hsp_align-len>342</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1310 <Hsp_qseq>LDDKTDALISGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1311 <Hsp_hseq>IQDVVGGILKGENPATG-SSPRRPISKIAIAQFPAERNSANDSAQDFNVNDLYKNGLILSAFNYAGRQTGDLRSFRSGQ-----NNI-----GDYRKGVVKEAIANILMPRGQTDVDTISHKFNDVQQSLVERGDSSVTGALSSMASHALYGGLESITQGAFADRGEQVYIASRAMYAGAENRTKTYTWQLTPRNVYDLMQILTIYEMLSYYSYGAVEKSKTASQIKSTLDNAYKETFINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGETSSFDMRSDMFGPAQIQSIRFDKSPDGHFGGLAIAPNLPSSFVLEVTFREILALNRSDLYDE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1312 <Hsp_midline>+ D ++ G + G SS I AQ+P+ER++ ND++ V+DLYKNGL+ +A++ R TGD+RS R G+ N++ G V K + NIL+PR ++DV+++SHKFNDV SL+ RG + TG LS++AS A++GGLES+TQG AD EQ+Y +R+MY GA+NRTK +TW LTPR+V DL+ I+ IYE +YYSYG S A ++KS LD YK TF++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG TS FD R+++FGP QIQSIRFDK+P+G+F GLAIAPNLPS+F LE+T REIL LNR+ +Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1313 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1314 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1315 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1316 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1317 <Hit_num>32</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1318 <Hit_id>gi|37651665|ref|NP_932539.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1319 <Hit_def>baseplate subunit [Aeromonas phage 44RR2.8t] &gt;gi|66391986|ref|YP_238911.1| baseplate tail tube cap [Aeromonas phage 31] &gt;gi|34732965|gb|AAQ81502.1| baseplate tail tube cap [Aeromonas phage 44RR2.8t] &gt;gi|62114823|gb|AAX63671.1| gp48 [Aeromonas phage 31]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1320 <Hit_accession>NP_932539</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1321 <Hit_len>342</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1322 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1323 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1324 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1325 <Hsp_bit-score>362.073</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1326 <Hsp_score>928</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1327 <Hsp_evalue>5.01898e-120</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1328 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1329 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1330 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1331 <Hsp_hit-to>341</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1332 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1333 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1334 <Hsp_identity>174</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1335 <Hsp_positive>245</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1336 <Hsp_gaps>14</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1337 <Hsp_align-len>351</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1338 <Hsp_qseq>IKVREL-DDKTDALISGV---KTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1339 <Hsp_hseq>MKVTELIDGGVQDVVKGILKGENPAGGSTPRQPLSKITIAQFPAERNAANDSTQDFNVNDLYKNGLLLSAFNYSGRQTGDLRSFRTDQ-----NNI-----GDYRKGVVKEAIANILMPKGQTDIDTINHKFNDVQQSLVERGNGSITGALSSMASHAVYGGLESITQGAFADRGEQVYIASRAMYAGAENRTKTYTWQLTPRNVYDLVEIIKIYEMLSYYSYGSVEKSNTANDIRKSVDAAYKETIINPLTPEATHGQTTMFERITSFLSNVNVVSNPIIWTIRNFGQSSSFDSRSDIFGPAQIQSIRFDKSPDGHFGGLAVAPNLPSSFVLEVTFREILALNRSDLYSE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1340 <Hsp_midline>+KV EL D ++ G+ + AG S+ + AQ+P+ER+A ND++ V+DLYKNGLL +A++ + R TGD+RS R + N++ G V K + NIL+P+ ++D+++++HKFNDV SL+ RG G+ TG LS++AS AV+GGLES+TQG AD EQ+Y +R+MY GA+NRTK +TW LTPR+V DL+ II+IYE +YYSYG S A +++ +D YK T ++ LTP+ + T+FE+ITSFLSNV VVSNP +W +RNFG +S FD R+++FGP QIQSIRFDK+P+G+F GLA+APNLPS+F LE+T REIL LNR+ +Y+E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1341 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1342 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1343 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1344 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1345 <Hit_num>33</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1346 <Hit_id>gi|582955110|gb|AHI44678.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1347 <Hit_def>baseplate tail tube cap [Acinetobacter phage ZZ1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1348 <Hit_accession>AHI44678</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1349 <Hit_len>216</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1350 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1351 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1352 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1353 <Hsp_bit-score>302.753</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1354 <Hsp_score>774</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1355 <Hsp_evalue>1.69313e-98</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1356 <Hsp_query-from>138</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1357 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1358 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1359 <Hsp_hit-to>213</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1360 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1361 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1362 <Hsp_identity>139</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1363 <Hsp_positive>171</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1364 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1365 <Hsp_align-len>213</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1366 <Hsp_qseq>ISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEA-NKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1367 <Hsp_hseq>MTRGNGSPTGILSNMASTAVFGAIESATQGAMADHGEQIYNTSRSMYAGAENRTKTYSWDLTPRTPEDLSQILKIYEIFNYLSYGMTGNSAFAKSIKDEIDNWYKKTFIKPINDATGTTTQSTVMESVTSFLSNVIVVSNPTVWFIQNFGTQSKYDGLADIFGPAQISNIRFEKTSDGNFNGLAIAPNMPSTFVLEVTFREILTLNRASLYGE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1368 <Hsp_midline>++RG G+ TG+LSN+ASTAVFG +ES TQG MADH EQIYNT+RSMY GA+NRTK ++WDLTPR+ +DL I++IYE FNY SYG TG S +AK +K ++D WYK TF+ + TV E +TSFLSNVIVVSNPTVWF++NFGT SK+DG A++FGP QI +IRF+KT +GNFNGLAIAPN+PSTF LE+T REILTLNRAS+Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1369 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1370 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1371 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1372 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1373 <Hit_num>34</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1374 <Hit_id>gi|392973134|ref|YP_006489092.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1375 <Hit_def>putative split baseplate tail tube cap [Acinetobacter phage ZZ1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1376 <Hit_accession>YP_006489092</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1377 <Hit_len>202</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1378 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1379 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1380 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1381 <Hsp_bit-score>284.263</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1382 <Hsp_score>726</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1383 <Hsp_evalue>1.55814e-91</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1384 <Hsp_query-from>152</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1385 <Hsp_query-to>349</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1386 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1387 <Hsp_hit-to>199</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1388 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1389 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1390 <Hsp_identity>131</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1391 <Hsp_positive>159</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1392 <Hsp_gaps>1</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1393 <Hsp_align-len>199</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1394 <Hsp_qseq>VASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANK-NDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVYAE</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1395 <Hsp_hseq>MASTAVFGAIESATQGAMADHGEQIYNTSRSMYAGAENRTKTYSWDLTPRTPEDLSQILKIYEIFNYLSYGMTGNSAFAKSIKDEIDNWYKKTFIKPINDATGTTTQSTVMESVTSFLSNVIVVSNPTVWFIQNFGTQSKYDGLADIFGPAQISNIRFEKTSDGNFNGLAIAPNMPSTFVLEVTFREILTLNRASLYGE</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1396 <Hsp_midline>+ASTAVFG +ES TQG MADH EQIYNT+RSMY GA+NRTK ++WDLTPR+ +DL I++IYE FNY SYG TG S +AK +K ++D WYK TF+ + TV E +TSFLSNVIVVSNPTVWF++NFGT SK+DG A++FGP QI +IRF+KT +GNFNGLAIAPN+PSTF LE+T REILTLNRAS+Y E</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1397 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1398 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1399 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1400 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1401 <Hit_num>35</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1402 <Hit_id>gi|294661512|ref|YP_003579965.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1403 <Hit_def>gp48 baseplate subunit [Klebsiella phage KP15] &gt;gi|448260646|ref|YP_007348740.1| baseplate tail tube cap [Klebsiella phage KP27] &gt;gi|292660673|gb|ADE34921.1| gp48 baseplate subunit [Klebsiella phage KP15] &gt;gi|370343455|gb|AEX26584.1| baseplate tail tube cap [Klebsiella phage KP27]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1404 <Hit_accession>YP_003579965</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1405 <Hit_len>357</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1406 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1407 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1408 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1409 <Hsp_bit-score>170.244</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1410 <Hsp_score>430</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1411 <Hsp_evalue>1.23976e-45</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1412 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1413 <Hsp_query-to>347</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1414 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1415 <Hsp_hit-to>353</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1416 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1417 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1418 <Hsp_identity>111</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1419 <Hsp_positive>191</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1420 <Hsp_gaps>32</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1421 <Hsp_align-len>365</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1422 <Hsp_qseq>IKVRELDDKTDALIS----GVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGD-MRSMRLGEMKRTANSVVKSITGT-------NTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYK---STFLDTLTPDE-----ANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1423 <Hsp_hseq>MKFSIIDDSINTLKNIKNRGIPSGGAAITESVLKQTIVTAEFPAQRAAGIDNA--YNASSLYNNGLLFTAYDFNGVGSKDNYRSLR--QAAQNPKQILSSATGNVKYKQVLNSSIGTMEPVCQILLPRSLNDNEVNSHRYQDANDSFLTKG-------LSRVVSNMVWGAVESISGGIMADRREALDVGTKAAFQGSDKRTKMYYNTFVIESRNDLLELIKIYYLFTVLGYGTTSGGT-AKEVAALVKQYYGVLGAKTANAISPSSNPVTASDFDNSLGNDVVDFISNVEVIKSPPVWFIRDFQSGDSLRLPHSTFGPAGITSVRFGRSIDNIVNTLRESPNTPISLEVEIQFMELIDMRQDSIF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1424 <Hsp_midline>+K +DD + L + G+ + ++S ++ +TA++P++R+AG D + LY NGLLFTAYD N + D RS+R + + ++ S TG N++ PV ILLPRS +D E SH++ D DS +++G LS V S V+G +ES++ G+MAD E + ++ + G+D RTK++ S DL+ +I+IY F YG T T AKEV + + ++Y + + ++P ++ ++++ + F+SNV V+ +P VWF+R+F + FGP I S+RF ++ + N L +PN P + +EI E++ + + S++</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1425 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1426 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1427 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1428 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1429 <Hit_num>36</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1430 <Hit_id>gi|66391556|ref|YP_239081.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1431 <Hit_def>gp48 baseplate [Enterobacteria phage RB43] &gt;gi|62288644|gb|AAX78627.1| gp48 baseplate [Enterobacteria phage RB43] &gt;gi|406718846|emb|CCL97571.1| protein of unknown function [Enterobacteria phage RB43] &gt;gi|415434114|emb|CCK73954.1| protein of unknown function [Enterobacteria phage RB43]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1432 <Hit_accession>YP_239081</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1433 <Hit_len>361</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1434 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1435 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1436 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1437 <Hsp_bit-score>168.703</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1438 <Hsp_score>426</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1439 <Hsp_evalue>6.23176e-45</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1440 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1441 <Hsp_query-to>347</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1442 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1443 <Hsp_hit-to>357</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1444 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1445 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1446 <Hsp_identity>111</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1447 <Hsp_positive>191</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1448 <Hsp_gaps>36</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1449 <Hsp_align-len>369</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1450 <Hsp_qseq>IKVRELDDKTDALI----SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYD----MNSRTTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKST---FLDTLTPDE-----ANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1451 <Hsp_hseq>MKIKVLQDTVQSFAEIKNAGIPSGGATTTKNALSQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYDFTGGLAPGSKDNYRSLR--QAAQNAKQILSANTGNVRYKQVLNTRTMGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKG-------LSRAVSNVIWGAVESVSGGILADRREAIDIGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTPA-ELAGLVKTAYNNTASKVANVFAPSSNQTTASDFNDSIGDQIVDFVSNVEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPISVEIEIQFMELIDMRQDSIF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1452 <Hsp_midline>+K++ L D + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAYD + + + RS+R + + A ++ + TG NT + + P+ ILLPRS +D E SH++ D DS++++G LS S ++G +ES++ G++AD E I ++ + G+D RTK++ S DL+ +I+IY F YG T T A E+ + Y +T + P ++ ND++ ++I F+SNV V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P + +EI E++ + + S++</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1453 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1454 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1455 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1456 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1457 <Hit_num>37</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1458 <Hit_id>gi|509141759|ref|YP_008060624.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1459 <Hit_def>baseplate tail tube cap [Escherichia phage Lw1] &gt;gi|479258586|gb|AGJ71509.1| baseplate tail tube cap [Escherichia phage Lw1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1460 <Hit_accession>YP_008060624</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1461 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1462 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1463 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1464 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1465 <Hsp_bit-score>156.377</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1466 <Hsp_score>394</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1467 <Hsp_evalue>2.35983e-40</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1468 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1469 <Hsp_query-to>347</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1470 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1471 <Hsp_hit-to>360</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1472 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1473 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1474 <Hsp_identity>106</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1475 <Hsp_positive>187</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1476 <Hsp_gaps>39</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1477 <Hsp_align-len>372</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1478 <Hsp_qseq>IKVRELDDKTDALI----SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSR----TTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGET--GTSTYAKEVKSQLDEWYKSTFLDTL---------TPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1479 <Hsp_hseq>MKIKVLQDTVQSFAKIKNAGIPSGGATTTKNALTQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYEFTGGFAPGSKDNYRSLR--QAAQNAQQILSANTGNVRYKQVLNTRTMGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKGP-------SRVVSNVIWGVIESASGGILADRREAVDVGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTAAEIAELAKQTINKASTTGAKLINNAAAGNGPTPTVSN-GSIISDQMVDFVTNIEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPISVEIEIQFMELIDMRQDSIF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1480 <Hsp_midline>+K++ L D + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAY+ + + RS+R + + A ++ + TG NT + + P+ ILLPRS +D E SH++ D DS++++G S V S ++G +ES + G++AD E + ++ + G+D RTK++ S DL+ +I+IY F YG T GT+ E+ Q +T + TP +N + +++ F++N+ V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P + +EI E++ + + S++</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1481 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1482 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1483 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1484 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1485 <Hit_num>38</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1486 <Hit_id>gi|304373651|ref|YP_003858396.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1487 <Hit_def>gp48 baseplate tail tube cap [Enterobacteria phage RB16] &gt;gi|299829607|gb|ADJ55400.1| gp48 baseplate tail tube cap [Enterobacteria phage RB16]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1488 <Hit_accession>YP_003858396</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1489 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1490 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1491 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1492 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1493 <Hsp_bit-score>155.221</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1494 <Hsp_score>391</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1495 <Hsp_evalue>6.71724e-40</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1496 <Hsp_query-from>3</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1497 <Hsp_query-to>347</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1498 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1499 <Hsp_hit-to>360</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1500 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1501 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1502 <Hsp_identity>106</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1503 <Hsp_positive>186</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1504 <Hsp_gaps>39</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1505 <Hsp_align-len>372</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1506 <Hsp_qseq>IKVRELDDKTDALI----SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSR----TTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGET--GTSTYAKEVKSQLDEWYKSTFLDTL---------TPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1507 <Hsp_hseq>MKIKVLQDTVQSFAEIKNAGIPSGGATTTKNALTQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYEFTGGFAPGSKDNYRSLR--QAAQNAQQILSANTGNVRYKQVLNTRTMGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKGP-------SRVVSNVIWGVIESASGGILADRREAVDVGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTAAEIAELAKQTINKSSTTGAKLINNAVAGNGPTPTVSN-GSIISDQMVDFVINIEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPISVEIEIQFMELIDMRQDSIF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1508 <Hsp_midline>+K++ L D + +G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAY+ + + RS+R + + A ++ + TG NT + + P+ ILLPRS +D E SH++ D DS++++G S V S ++G +ES + G++AD E + ++ + G+D RTK++ S DL+ +I+IY F YG T GT+ E+ Q +T + TP +N + +++ F+ N+ V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P + +EI E++ + + S++</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1509 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1510 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1511 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1512 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1513 <Hit_num>39</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1514 <Hit_id>gi|414086183|ref|YP_006986373.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1515 <Hit_def>baseplate tail tube cap [Cronobacter phage vB_CsaM_GAP161] &gt;gi|378566508|gb|AFC22204.1| baseplate tail tube cap [Cronobacter phage vB_CsaM_GAP161]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1516 <Hit_accession>YP_006986373</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1517 <Hit_len>364</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1518 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1519 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1520 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1521 <Hsp_bit-score>153.68</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1522 <Hsp_score>387</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1523 <Hsp_evalue>2.64906e-39</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1524 <Hsp_query-from>17</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1525 <Hsp_query-to>347</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1526 <Hsp_hit-from>19</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1527 <Hsp_hit-to>360</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1528 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1529 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1530 <Hsp_identity>102</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1531 <Hsp_positive>178</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1532 <Hsp_gaps>43</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1533 <Hsp_align-len>358</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1534 <Hsp_qseq>SGVKTSAGQSSQSAKIKSTITAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYD----MNSRTTGDMRSMRLGEMKRTANSVVKSITGT-------NTNKVDKI-PVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLT--------------PDEANKNDTVF-EKITSFLSNVIVVSNPTVWFVRNFGTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASVY</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1535 <Hsp_hseq>AGIPSGGAATTKNALTQPIVTAEFPSQRAAGIDNA--YNASSLYNNGLLFTAYEFTGGLAPGSKDNYRSLR--QAAQNAQQILSANTGNVRYKQVLNSRTIGTLNPICQILLPRSLNDNEVNSHRYQDATDSIVAKGP-------SRVVSNVIWGAIESASGGILADRREAVDVGTKAAFQGSDKRTKMYYNTFVIESRYDLLELIKIYYLFTVLGYGTTSGGTAA-----EIAELAKQTINKSSTAGAKLINNAIAGNGPTPTVSNGSIISDQAVDFVTNIEVIKSPPVWFIRDFQTGDSLRFPHSTFGPAGITSVRFGRTMDNIVNTLRESPNTPIAVEIEIQFMELIDMRQDSIF</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1536 <Hsp_midline>+G+ + ++++A + +TA++PS+R+AG D + LY NGLLFTAY+ + + + RS+R + + A ++ + TG N+ + + P+ ILLPRS +D E SH++ D DS++++G S V S ++G +ES + G++AD E + ++ + G+D RTK++ S DL+ +I+IY F YG T T A ++ E K T + T P N ++ ++ F++N+ V+ +P VWF+R+F T FGP I S+RF +T + N L +PN P +EI E++ + + S++</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1537 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1538 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1539 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1540 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1541 <Hit_num>40</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1542 <Hit_id>gi|392973135|ref|YP_006489093.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1543 <Hit_def>putative split baseplate tail tube cap [Acinetobacter phage ZZ1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1544 <Hit_accession>YP_006489093</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1545 <Hit_len>143</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1546 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1547 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1548 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1549 <Hsp_bit-score>107.071</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1550 <Hsp_score>266</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1551 <Hsp_evalue>1.55074e-24</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1552 <Hsp_query-from>22</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1553 <Hsp_query-to>136</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1554 <Hsp_hit-from>19</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1555 <Hsp_hit-to>143</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1556 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1557 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1558 <Hsp_identity>59</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1559 <Hsp_positive>80</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1560 <Hsp_gaps>10</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1561 <Hsp_align-len>125</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1562 <Hsp_qseq>SAGQSSQSAKIKSTI-TAQYPSERSAGNDTSGSLRVHDLYKNGLLFTAYDMNSRTTGDMRSMRLGEMK-----RTANSVVKSITG----TNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDS</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1563 <Hsp_hseq>SAGQSQKSKETKTKIMTAQFPAERAASVDTTNAAEVGQNYQNGLLFTAYEYTSRTTPDLRSMRQRVQKSYKVLESTQKILSAVAGVSGQTEGRSTSKAPVANILMPRSKTDSDNTSHKFNDVGES</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1564 <Hsp_midline>SAGQS +S + K+ I TAQ+P+ER+A DT+ + V Y+NGLLFTAY+ SRTT D+RSMR K + ++ ++ G T K PV NIL+PRSK+D ++ SHKFNDVG+S</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1565 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1566 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1567 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1568 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1569 <Hit_num>41</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1570 <Hit_id>gi|646519388|ref|WP_025548737.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1571 <Hit_def>hypothetical protein [Vibrio parahaemolyticus] &gt;gi|655769907|gb|KEE53216.1| hypothetical protein EM88_01435 [Vibrio parahaemolyticus] &gt;gi|655811799|gb|KEE89780.1| hypothetical protein EM91_01710 [Vibrio parahaemolyticus]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1572 <Hit_accession>WP_025548737</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1573 <Hit_len>356</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1574 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1575 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1576 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1577 <Hsp_bit-score>60.8474</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1578 <Hsp_score>146</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1579 <Hsp_evalue>3.83249e-07</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1580 <Hsp_query-from>87</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1581 <Hsp_query-to>346</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1582 <Hsp_hit-from>109</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1583 <Hsp_hit-to>342</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1584 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1585 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1586 <Hsp_identity>65</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1587 <Hsp_positive>105</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1588 <Hsp_gaps>44</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1589 <Hsp_align-len>269</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1590 <Hsp_qseq>MKRTANSVVKSITGTNTNKVDKIPVVNILLPRSKSDVESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNT-ARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNF--------GTTSKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRASV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1591 <Hsp_hseq>MPLLQDSLVHDIGGS----VDDITSVALAAGLDVADLEGDLSKLSSGVKSLVQNAKDITVGTVSQQAG-------QGSRQSTLASGNKVIQNNPGTDSWQGTQLREQTLIWQFNPKSLPELKAVASIIKTFKLLSLGSIGNSS------------------NELT--QANNNDRLNNPYGHIAS---CIKTPPLWFLEEVSDYYTGQDGAGARYTDRL-VFGPAAIASIKVNRTPDQYWKTFKGTAGDPASLDLEITFIELLPLDKETV</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1592 <Hsp_midline>M +S+V I G+ VD I V + +D+E K + SL+ G +S A + Q +A N+ I N + G R + W P+S+ +L A+ I + F S G G S+ + LT +AN ND + S + P +WF+ G +++ R VFGP I SI+ ++TP+ + P++ LEIT E+L L++ +V</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1593 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1594 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1595 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1596 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1597 <Hit_num>42</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1598 <Hit_id>gi|589286464|ref|YP_009006262.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1599 <Hit_def>tail-tube assembly protein [Vibrio phage VH7D] &gt;gi|432142395|gb|AGB06975.1| tail-tube assembly protein [Vibrio phage VH7D]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1600 <Hit_accession>YP_009006262</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1601 <Hit_len>378</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1602 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1603 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1604 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1605 <Hsp_bit-score>58.5362</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1606 <Hsp_score>140</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1607 <Hsp_evalue>2.65852e-06</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1608 <Hsp_query-from>60</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1609 <Hsp_query-to>344</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1610 <Hsp_hit-from>61</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1611 <Hsp_hit-to>339</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1612 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1613 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1614 <Hsp_identity>73</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1615 <Hsp_positive>122</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1616 <Hsp_gaps>50</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1617 <Hsp_align-len>307</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1618 <Hsp_qseq>YKNGLLFTAYDMNSRTTGDMRSMR----------------LGEMKRTANSVVKSITGTNTNKVDKIP--VVNILLPRSKSDV--ESVSHKFNDVGDSLISRGGGTATGVLSNVASTAVFGGLESLTQGLMADHNEQIYNTARSMYGGADNRTKVFTWDLTPRSVQDLIAIIEIYEYFNYYSYGETGTSTYAKEVKSQLDEWYKSTFLDTLTPDEANKNDTVFEKITSFLSNVIVVSNPTVWFVRNFGTT--SKFDGRAEVFGPCQIQSIRFDKTPNGNFNGLAIAPNLPSTFTLEITMREILTLNRA</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1619 <Hsp_hseq>HPNFFIFRAYDLAHTTKQHYTDMRSSFTAAQTENEQSGEVPSELKATLALYAPNIVEEVSHEYDKTPTSVLNDFLASAASAAGSDTVSEGVDRGKRAVATAAGATLAQIKRSFIQSNAAGQLEK-NSSVVTD------NVTVTAYKGTAQRTQTMVYQFHPKSLDELKVVAEIIKTF----YG------LSLPVKGQID----SQLLDTGTANLGSGFAAGFAKYATLLKT------PPVWMIEEVSDTDATRYTPRF-IFGPAGITSVKLNRTPDQYWRTFRGTAGDPAGIELEITFSELIPLDRA</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1620 <Hsp_midline>+ N +F AYD+ T MR E+K T +I +++ DK P V+N L + S ++VS + ++ + G T + + + G LE ++ D N + Y G RT+ + P+S+ +L + EI + F YG + VK Q+D S LDT T + + F K + L P VW + T +++ R +FGP I S++ ++TP+ + P+ LEIT E++ L+RA</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1621 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1622 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1623 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1624 </Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1625 <Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1626 <Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1627 <Statistics_db-num>48094830</Statistics_db-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1628 <Statistics_db-len>17186091396</Statistics_db-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1629 <Statistics_hsp-len>148</Statistics_hsp-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1630 <Statistics_eff-space>2043815480868</Statistics_eff-space>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1631 <Statistics_kappa>0.041</Statistics_kappa>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1632 <Statistics_lambda>0.267</Statistics_lambda>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1633 <Statistics_entropy>0.14</Statistics_entropy>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1634 </Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1635 </Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1636 </Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1637 <Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1638 <Iteration_iter-num>5</Iteration_iter-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1639 <Iteration_query-ID>Query_5</Iteration_query-ID>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1640 <Iteration_query-def>Merlin_5</Iteration_query-def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1641 <Iteration_query-len>576</Iteration_query-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1642 <Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1643 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1644 <Hit_num>1</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1645 <Hit_id>gi|456351275|ref|YP_007501227.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1646 <Hit_def>baseplate hub [Salmonella phage S16] &gt;gi|347466340|gb|AEO97126.1| baseplate hub [Salmonella phage S16] &gt;gi|408387124|gb|AFU64133.1| baseplate hub [Salmonella phage STML-198]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1647 <Hit_accession>YP_007501227</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1648 <Hit_len>577</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1649 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1650 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1651 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1652 <Hsp_bit-score>675.626</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1653 <Hsp_score>1742</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1654 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1655 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1656 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1657 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1658 <Hsp_hit-to>577</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1659 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1660 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1661 <Hsp_identity>345</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1662 <Hsp_positive>442</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1663 <Hsp_gaps>3</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1664 <Hsp_align-len>578</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1665 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPE--NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1666 <Hsp_hseq>MKTENMTSFRRRKVIADSKGERDAAAAASNQVESLDSIGYKLDSVQSATELTSEVIEQKSNDIISAVNDTTAGVELTAEFAENTSKTVRELTDVTSAISDKISKLTDMLEQKIQAVQQKFVDSSKVTDDTLKVIGDSIPEPVESNLPAIPEKIFDKPEENNS-PDADFFPTLPSKAEEVDNKKDSDKKILDTENLLKDLVGTTKTGFKATVSITDKISNMLFKYTVSALAESAKLAGTIFAIVLGIDLLRAHFKYWSDKFSSNFDEFSQSAGEWGSLLQSVLGSLQEIKKFWENNDWSGLAVAIVKGLADVLYNLSELMSLGISKISAAILSALGFDNAALSIKGAALEGFQARTGNELNEEDQDTLARYQTRRIQEGPDAFDKFSEYKTRAFDFITGRDNKNTTTTEQEREAEVKKLKSLPEEELNEINKKSNNARAALVRFEKYMGDVDPENATNIESLDKAYNNVKSLVNDSELNKAPAIKKELEVRLQKAEARYQKIKTESKPEPAAPSASEDVQKVQNIEKAEQAKKSDANQSSSSSVVNAQVNNVNNSRTIQTINPVTATPAPGVFKATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1667 <Hsp_midline>MK+ENM++ RRRKVIADSKGERDAA+ AS+QV+SL+ IG KLD VQSA EL +EVIE+K N++I +V++ G EL AE +E T+++++ LT V S ISDK+SKL MLE K+QAV+QK +S L VI D +P+P E P +PE+I ++NN+ PD DFFP +P + E +NKKD K ++L DL+ TTK GFKAT+SITDKIS+MLFKYTV+ALAE+AK+A +FA+VLGIDLLR HFKYW+DKF SNFDEFS AGEWG LLQS+ G L +IKKFWE DWSGLAVAIVKGLADV+YNLSE+MSLGISKISA+IL ALGF+NAA +I+G+ALEGFQ RTGN L+E+DQ LA+YQ++RI+EGP DK E+KTRAFD++ GR+NK +T +R+ E + LK++ E+ E K N ARAA+ R EKY+GDVDPEN TN++SL+KAYN+ K ++DS ++ PA KKEL+ R Q+ E++YQK+K ++ P+PAAP+ SED Q+VQNI+KAE AK+ + +V N QVNNVNNS+TI + VTATPAPGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1668 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1669 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1670 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1671 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1672 <Hit_num>2</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1673 <Hit_id>gi|589889938|ref|YP_009005474.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1674 <Hit_def>baseplate hub subunit tail length determinator [Enterobacter phage PG7] &gt;gi|583927851|gb|AHI61113.1| baseplate hub subunit tail length determinator [Enterobacter phage PG7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1675 <Hit_accession>YP_009005474</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1676 <Hit_len>586</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1677 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1678 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1679 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1680 <Hsp_bit-score>549.28</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1681 <Hsp_score>1414</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1682 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1683 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1684 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1685 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1686 <Hsp_hit-to>586</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1687 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1688 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1689 <Hsp_identity>297</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1690 <Hsp_positive>414</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1691 <Hsp_gaps>20</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1692 <Hsp_align-len>591</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1693 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAE-------GTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPE---RILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDD--KKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANT-QVNNV-NNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1694 <Hsp_hseq>MKTENMKTMRR-KVIEEGRSERDAAKAASTQAESLSVLSSQLDDLQTQAELTSEVIEDKGNQVIDALNRVDQSIIDTTAGAELTAEASERTTEAVKQQTEVSNKISDKLSKLTELLNERLSAITPNLPQISV-PDTSLSVVEDAVPV--DIVTPGLPELLQELIPDPVNNTNNPNDAFFPTVPENPESDSKKGADEERKKKDSDTLSNLLKATKSGFKASMSITDRIAGMLFKYTVTAVIEAAKTAALLFSIVLGIDVIMKHFKYWSDKFTSDFDKFSAEAGEWGSTLSSIFGTLENIQKFWEAGDWSGLTVAIVKGVTEIIYNLSELISLGMSKVAAAILSIIPGLGDAALSVEGAALEGFQERTGNSLSKEDQDTLAKYQSSKIEKGENFFDKVSQGKTWIVNKITGDANISDFVTDEERESQNEKLRQMKPEEREQVLKKGNEARAAIVRFEKYMEQINPDDKRSVESADKAYANLQTQLNDTDLNNSPVTKKELSARMNIVTAKYDKLK-GKEPQPAPSSQSEDVKKVESIEKNKAAKEASLGTSAGAAAANLFNTNNVINNSRTINTVSPVTSTNAPGVFGATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1695 <Hsp_midline>MK+ENM TMRR KVI + + ERDAA AS Q +SL ++ +LDD+Q+ EL +EVIE+KGN +ID+++ V + G EL AEASERTTE++K T V++ ISDKLSKL +L ++ A+ + + T LSV+ED +P + +PGLPE ++P +N N P++ FFP VP+ PE++ K ++ KK +D L +LLK TK GFKA++SITD+I+ MLFKYTVTA+ EAAK AA+LF++VLGID++ HFKYW+DKF S+FD+FSAEAGEWG L SIFG L +I+KFWEAGDWSGL VAIVKG+ ++IYNLSE++SLG+SK++A+IL + G +AA ++ G+ALEGFQERTGNSLS++DQ LAKYQS +IE+G DK + KT + + G N D +R+ + + L+ M PE+RE+ L K NEARAA+ R EKY+ ++P++ +++S +KAY + + ++D+ +++ P TKKEL R V +KY KLK P+PA + SED ++V++I+K + AKE S ++ AN NNV NNS+TI+ V VT+T APGVFGATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1696 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1697 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1698 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1699 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1700 <Hit_num>3</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1701 <Hit_id>gi|311993187|ref|YP_004010053.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1702 <Hit_def>gp29 base plate hub subunit, tail length determinator [Enterobacteria phage CC31] &gt;gi|284178025|gb|ADB81691.1| gp29 base plate hub subunit, tail length determinator [Enterobacteria phage CC31]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1703 <Hit_accession>YP_004010053</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1704 <Hit_len>586</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1705 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1706 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1707 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1708 <Hsp_bit-score>546.584</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1709 <Hsp_score>1407</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1710 <Hsp_evalue>0</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1711 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1712 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1713 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1714 <Hsp_hit-to>586</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1715 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1716 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1717 <Hsp_identity>296</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1718 <Hsp_positive>412</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1719 <Hsp_gaps>22</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1720 <Hsp_align-len>592</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1721 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAE-------GTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPE---RILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDD--KKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQK---AENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1722 <Hsp_hseq>MKTENMKTMRR-KVIEEGRSERDAAKAASTQAESLSVLSSQLDDLQTQAELTSEVIEDKGNQVIDALNRVDQSIIDTTAGAELTAEASERTTEAVKQQTEVSNKISDKLSKLTELLNERLSAITPNLPQISV-PDTSLSVVEDAVPV--DIVTPGLPELLQELIPDPVNNTNNPNDAFFPTVPENPESDSKKGADEERKKKDSDTLSNLLKATKSGFKASMSITDRIAGMLFKYTVTAVIEAAKTAALLFSIVLGIDVIMKHFKYWSDKFTSDFDKFSAEAGEWGSTLSSIFGTLENIQKFWEAGDWSGLTVAIVKGVTEIIYNLSELISLGMSKVAAAILSLIPGLGDAALSVEGAALEGFQERTGNSLSKEDQDTLAKYQSSKIEKGENFFDKVSQGKTWIVNKITGDANISDFVTDEERTAQNEKLRQMKPEEREQVLKKGNEARAAIVRFEKYMEQINPDDKRSVQSADKAYANLQTQLNDTDLNNSPITKKELNARMNIVTAKYDKLK-GKEPQPAPSSQSEDVKKVESIEKNKAAEKASLGTGAGAAAANLFNTN-NVINNSRTINTVSPVTSTNAPGVFGATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1723 <Hsp_midline>MK+ENM TMRR KVI + + ERDAA AS Q +SL ++ +LDD+Q+ EL +EVIE+KGN +ID+++ V + G EL AEASERTTE++K T V++ ISDKLSKL +L ++ A+ + + T LSV+ED +P + +PGLPE ++P +N N P++ FFP VP+ PE++ K ++ KK +D L +LLK TK GFKA++SITD+I+ MLFKYTVTA+ EAAK AA+LF++VLGID++ HFKYW+DKF S+FD+FSAEAGEWG L SIFG L +I+KFWEAGDWSGL VAIVKG+ ++IYNLSE++SLG+SK++A+IL + G +AA ++ G+ALEGFQERTGNSLS++DQ LAKYQS +IE+G DK + KT + + G N D +R + + L+ M PE+RE+ L K NEARAA+ R EKY+ ++P++ ++QS +KAY + + ++D+ +++ P TKKEL+ R V +KY KLK P+PA + SED ++V++I+K AE A + N+ NT N +NNS+TI+ V VT+T APGVFGATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1724 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1725 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1726 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1727 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1728 <Hit_num>4</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1729 <Hit_id>gi|422934607|ref|YP_007004568.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1730 <Hit_def>phage baseplate hub [Enterobacteria phage ime09] &gt;gi|339791390|gb|AEK12447.1| phage baseplate hub [Enterobacteria phage ime09]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1731 <Hit_accession>YP_007004568</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1732 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1733 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1734 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1735 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1736 <Hsp_bit-score>447.588</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1737 <Hsp_score>1150</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1738 <Hsp_evalue>1.35305e-146</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1739 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1740 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1741 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1742 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1743 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1744 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1745 <Hsp_identity>267</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1746 <Hsp_positive>374</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1747 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1748 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1749 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1750 <Hsp_hseq>KPQEMQTMRR-KVISDNKSTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSQAWDLFSTDFTKFSSETGTWGPLLQSIFSSIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNDDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1751 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKKD + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ + G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1752 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1753 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1754 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1755 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1756 <Hit_num>5</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1757 <Hit_id>gi|228861124|ref|YP_002854147.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1758 <Hit_def>gp29 base plate hub [Enterobacteria phage RB51] &gt;gi|227438798|gb|ACP31110.1| gp29 base plate hub [Enterobacteria phage RB51] &gt;gi|291290410|dbj|BAI83205.1| baseplate hub subunit/tail length determinator [Enterobacteria phage AR1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1759 <Hit_accession>YP_002854147</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1760 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1761 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1762 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1763 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1764 <Hsp_bit-score>442.965</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1765 <Hsp_score>1138</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1766 <Hsp_evalue>9.14277e-145</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1767 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1768 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1769 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1770 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1771 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1772 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1773 <Hsp_identity>264</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1774 <Hsp_positive>378</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1775 <Hsp_gaps>49</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1776 <Hsp_align-len>606</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1777 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP----DPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1778 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTG----TSLAVVENAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPIEPKQESPEEKQKRDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMVALIMAVVIGIDLLMVHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDEIKKFWEAGDWGGLTVAIVEGLGSVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNDDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSIEAAHEDLKKRMNDPDLNNSPAVKKELASRFAKIDATYQELKK-NQPEAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1779 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G T L+V+E+ +P + D ES G +LP + NN PD DFFP P P EP E+ ++ QK+D + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM A++ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ + G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E A+ KK ++D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1780 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1781 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1782 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1783 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1784 <Hit_num>6</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1785 <Hit_id>gi|422934972|ref|YP_007004932.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1786 <Hit_def>baseplate hub subunit tail length determinator [Escherichia phage wV7] &gt;gi|343177526|gb|AEM00852.1| baseplate hub subunit tail length determinator [Escherichia phage wV7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1787 <Hit_accession>YP_007004932</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1788 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1789 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1790 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1791 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1792 <Hsp_bit-score>442.58</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1793 <Hsp_score>1137</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1794 <Hsp_evalue>1.58375e-144</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1795 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1796 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1797 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1798 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1799 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1800 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1801 <Hsp_identity>263</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1802 <Hsp_positive>378</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1803 <Hsp_gaps>49</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1804 <Hsp_align-len>606</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1805 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP----DPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1806 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTG----TSLAVVENAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPIEPKQESPEEKQKRDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMVALIMAVVIGIDLLMVHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDEIKKFWEAGDWGGLTVAIIEGLGSVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNDDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSIEAAHEDLKKRMNDPDLNNSPAVKKELASRFAKIDATYQELKK-NQPEAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1807 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G T L+V+E+ +P + D ES G +LP + NN PD DFFP P P EP E+ ++ QK+D + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM A++ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAI++GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ + G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E A+ KK ++D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1808 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1809 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1810 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1811 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1812 <Hit_num>7</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1813 <Hit_id>gi|604671901|gb|AHV82895.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1814 <Hit_def>baseplate hub subunit, tail length determinator [Escherichia phage vB_EcoM_PhAPEC2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1815 <Hit_accession>AHV82895</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1816 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1817 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1818 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1819 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1820 <Hsp_bit-score>441.425</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1821 <Hsp_score>1134</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1822 <Hsp_evalue>3.83095e-144</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1823 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1824 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1825 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1826 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1827 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1828 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1829 <Hsp_identity>269</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1830 <Hsp_positive>375</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1831 <Hsp_gaps>30</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1832 <Hsp_align-len>598</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1833 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSV-------DNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP-DPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKD-DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMS-------NFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF----KTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKE-DNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1834 <Hsp_hseq>MKPEEMKSMRRNKVIADNKPQKVAATAATDSLEALNNISSKLDDVQAASELTSQSVEDKGNGIIESIGDLKNSTDNTAEGTELIAEVIEKQTEVTKSINEVSSAISSKLDRLATLLEQKLQ-TSTAIQNTGG---TSLEVIENAIPVKVVENETSDELFKALPTPEKIDNKPDEDFFPVPVQESANSTSDSKGGISFKLSDKIAMLTKTVQTGFNKSISISDRIAGMLFKYTITAAIEAAKMAALILGIVIGIDLLIVHFKYWTDKFTSAWDLFDENFTKFSDEAKEWGKFLSDIFTSIDSIKQLWEAGDWGGLTVAIVKGVGTALMNLGELIQLGMAKLSASILRAIGFGDTADEIEGRALEGFQETTGNKLKKEDQEKVAKYQMKRDDGELGTVSKGLDMLQRGKTFVTNWVRGNDNKEEFSTSDERAAESAKLKELPEEERKEAYIKANETRAALVRFEDYIDKIDMTNPENAKNVEKSYADLSKLIKDPELNKTPVVKKELDARFEKLNNKMAEAKKAQTTVKPESSSKSPEAKQVQSIEKGRAS--ESKQQQPVAAISNT--NNVVKKNTVVQNMTPVTSTTAPGIFHATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1835 <Hsp_midline>MK E M +MRR KVIAD+K ++ AA+ A+D +++L I KLDDVQ+A+EL ++ +E+KGN +I+S+ DN AEGTEL AE E+ TE K++ V+S IS KL +LA++LE K+Q +Q +G T L VIE+ +P E E+ + LP + +N PDEDFFP QE N+ D K K +D + L KT + GF +ISI+D+I+ MLFKYT+TA EAAKMAA++ +V+GIDLL +HFKYWTDKF S NF +FS EA EWG L IF + IK+ WEAGDW GL VAIVKG+ + NL E++ LG++K+SASIL A+GF + A I G ALEGFQE TGN L ++DQ+ +AKYQ KR + G + K + KT +WV G +NK + + + +R E+ LK + E+R+E IK NE RAA+ R E YI +D NP N +++EK+Y K I D ++ P KKELD RF+++ +K + K+ T KP + + S + ++VQ+I+K + +SK+ ++NT NNV T+ Q T VT+T APG+F ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1836 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1837 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1838 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1839 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1840 <Hit_num>8</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1841 <Hit_id>gi|32453687|ref|NP_861896.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1842 <Hit_def>gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage RB69] &gt;gi|32350506|gb|AAP76105.1| gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage RB69]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1843 <Hit_accession>NP_861896</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1844 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1845 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1846 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1847 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1848 <Hsp_bit-score>441.425</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1849 <Hsp_score>1134</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1850 <Hsp_evalue>4.26665e-144</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1851 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1852 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1853 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1854 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1855 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1856 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1857 <Hsp_identity>270</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1858 <Hsp_positive>376</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1859 <Hsp_gaps>34</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1860 <Hsp_align-len>600</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1861 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSV-------DNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP-DPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKD-DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMS-------NFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF----KTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKE-DNTPKPAAPATSEDNQRVQNIQK--AENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1862 <Hsp_hseq>MKPEEMKSMRRNKVIADNKPQKVAATAATDSLEALNNISSKLDDVQAASELTSQSVEDKGNGIIESIGDLKNSTDNTAEGTELIAEVIEKQTEVTKSINEVSSAISSKLDRLATLLEQKLQ-TSTAIQNTGG---TSLEVIENAIPVKVVENETSDELFKAFPTPEKIDNKPDEDFFPTPVQESANSTSDSKGGISFKLSDKIAMLTKTVQTGFNKSISISDRIAGMLFKYTITAAIEAAKMAALILGIVIGIDLLIVHFKYWTDKFTSAWDLFDENFTKFSDEAKEWGKFLSDIFTSIDSIKQLWEAGDWGGLTVAIVKGVGTALMNLGELIQLGMAKLSASILRAIGFGDTADEIEGRALEGFQETTGNKLKKEDQEKVAKYQMKRDDGELGTVSKGLDMLQRGKTFVTNWVRGNDNKEEFSTSDERAAESAKLKELPEEERKEAYIKANETRAALVRFEDYIDKIDMTNPENAKNVEKSYADLSKLIKDPELNKTPVVKKELDARFEKLNNKMAEAKKAQTTVKPESSSKSPEAKQVQSIEKGRASESKQQQPVAT----ISNT--NNVVKKNTVVQNMTPVTSTTAPGIFHATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1863 <Hsp_midline>MK E M +MRR KVIAD+K ++ AA+ A+D +++L I KLDDVQ+A+EL ++ +E+KGN +I+S+ DN AEGTEL AE E+ TE K++ V+S IS KL +LA++LE K+Q +Q +G T L VIE+ +P E E+ + P + +N PDEDFFP QE N+ D K K +D + L KT + GF +ISI+D+I+ MLFKYT+TA EAAKMAA++ +V+GIDLL +HFKYWTDKF S NF +FS EA EWG L IF + IK+ WEAGDW GL VAIVKG+ + NL E++ LG++K+SASIL A+GF + A I G ALEGFQE TGN L ++DQ+ +AKYQ KR + G + K + KT +WV G +NK + + + +R E+ LK + E+R+E IK NE RAA+ R E YI +D NP N +++EK+Y K I D ++ P KKELD RF+++ +K + K+ T KP + + S + ++VQ+I+K A +K+Q +T ++NT NNV T+ Q T VT+T APG+F ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1864 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1865 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1866 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1867 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1868 <Hit_num>9</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1869 <Hit_id>gi|642905806|ref|YP_009037575.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1870 <Hit_def>baseplate hub subunit, tail length determinator [Escherichia phage vB_EcoM_JS09] &gt;gi|642903960|gb|AIA79980.1| baseplate hub subunit, tail length determinator [Escherichia phage vB_EcoM_JS09]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1871 <Hit_accession>YP_009037575</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1872 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1873 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1874 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1875 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1876 <Hsp_bit-score>441.039</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1877 <Hsp_score>1133</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1878 <Hsp_evalue>6.28771e-144</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1879 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1880 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1881 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1882 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1883 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1884 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1885 <Hsp_identity>267</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1886 <Hsp_positive>375</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1887 <Hsp_gaps>30</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1888 <Hsp_align-len>598</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1889 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSV-------DNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLP-DPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKD-DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMS-------NFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF----KTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKE-DNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1890 <Hsp_hseq>MKPEEMKSMRRNKVIADNKPQKVAATAATDSLEALNDISSKLDDVQAASELTSQSVEDKGNGIIESIGDLKNSTDNTAEGTELIAEVIEKQTEVTKSINEVSSAISSKLDRLATLLEQKLQ-TSTAIQNTGG---TSLEVIENAIPVKVVENETSDELFKAFPTPEKIDNKPDEDFFPAPVQESANSTSDSKGGISFKLSDKIAMLTKTVQTGFNKSISISDRIAGMLFKYTITAAIEAAKLAALILGIVIGIDLLIVHFKYWTDKFTSAWDLFDENFTKFSDEAKEWGKFLSDIFTSIDSIKQLWEAGDWGGLTVAIVKGVGTALMNLGELIQLGMAKLSASILRAIGFGDTADEIEGRALEGFQETTGNTLKKEDQEKVAKYQMKRDDGELGTVSKGLDMLQRGKTFVTNWVRGNDNKEEFSTSDERAAESAKLKELPEEERKEAYIKANETRAALVRFEDYIDKIDMTNPENAKNVEKSYADLSKLIKDPELNKTPVVKKELDARFEKLNNKMAEAKKAQTTVKPESSSKSPEAKQVQSIEKGRAS--ESKQQQPVAAISNT--NNVVKKNTVVQNMTPVTSTTAPGIFHATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1891 <Hsp_midline>MK E M +MRR KVIAD+K ++ AA+ A+D +++L I KLDDVQ+A+EL ++ +E+KGN +I+S+ DN AEGTEL AE E+ TE K++ V+S IS KL +LA++LE K+Q +Q +G T L VIE+ +P E E+ + P + +N PDEDFFP QE N+ D K K +D + L KT + GF +ISI+D+I+ MLFKYT+TA EAAK+AA++ +V+GIDLL +HFKYWTDKF S NF +FS EA EWG L IF + IK+ WEAGDW GL VAIVKG+ + NL E++ LG++K+SASIL A+GF + A I G ALEGFQE TGN+L ++DQ+ +AKYQ KR + G + K + KT +WV G +NK + + + +R E+ LK + E+R+E IK NE RAA+ R E YI +D NP N +++EK+Y K I D ++ P KKELD RF+++ +K + K+ T KP + + S + ++VQ+I+K + +SK+ ++NT NNV T+ Q T VT+T APG+F ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1892 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1893 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1894 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1895 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1896 <Hit_num>10</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1897 <Hit_id>gi|228861505|ref|YP_002854526.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1898 <Hit_def>gp29 base plate hub [Enterobacteria phage RB14] &gt;gi|227438521|gb|ACP30834.1| gp29 base plate hub [Enterobacteria phage RB14]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1899 <Hit_accession>YP_002854526</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1900 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1901 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1902 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1903 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1904 <Hsp_bit-score>438.343</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1905 <Hsp_score>1126</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1906 <Hsp_evalue>7.24825e-143</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1907 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1908 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1909 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1910 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1911 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1912 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1913 <Hsp_identity>263</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1914 <Hsp_positive>371</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1915 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1916 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1917 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1918 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTAAIVEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1919 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL AIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1920 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1921 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1922 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1923 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1924 <Hit_num>11</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1925 <Hit_id>gi|414086558|ref|YP_006986747.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1926 <Hit_def>baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM_ACG-C40] &gt;gi|383396339|gb|AFH20155.1| baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM_ACG-C40]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1927 <Hit_accession>YP_006986747</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1928 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1929 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1930 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1931 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1932 <Hsp_bit-score>437.958</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1933 <Hsp_score>1125</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1934 <Hsp_evalue>8.89384e-143</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1935 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1936 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1937 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1938 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1939 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1940 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1941 <Hsp_identity>263</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1942 <Hsp_positive>372</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1943 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1944 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1945 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1946 <Hsp_hseq>KPQEMQTMRR-KVISDNKPVQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLAVVESAIPVKVVEDDTAEFVG---PLLPAPEAVNNDPDADFFPAPQPVEPKRESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMVALIMAVVIGIDLLMVHFKYWSDKFSKAWDLFSTDFKTFSSETGTWGPLLQSIFESIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSIEAAHEDLKKRMNDPDLNNSPAVKKELASRFAKIDATYQELKK-NQPEAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFGATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1947 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S + S I K+ + D E G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM A++ A+V+GIDLL +HFKYW+DKF ++F FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E A+ KK ++D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVFGATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1948 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1949 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1950 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1951 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1952 <Hit_num>12</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1953 <Hit_id>gi|9632606|ref|NP_049805.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1954 <Hit_def>gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage T4] &gt;gi|137988|sp|P13337.1|VG29_BPT4 RecName: Full=Tail-tube assembly protein Gp29; AltName: Full=Folylpolyglutamate synthase; AltName: Full=Tail length regulator; AltName: Full=Tetrahydrofolylpolyglutamate synthase [Enterobacteria phage T4] &gt;gi|5354230|gb|AAD42437.1|AF158101_24 gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage T4] &gt;gi|215946|gb|AAA32538.1| tail-tube assembly protein [Enterobacteria phage T4]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1955 <Hit_accession>NP_049805</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1956 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1957 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1958 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1959 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1960 <Hsp_bit-score>437.573</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1961 <Hsp_score>1124</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1962 <Hsp_evalue>1.07961e-142</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1963 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1964 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1965 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1966 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1967 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1968 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1969 <Hsp_identity>264</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1970 <Hsp_positive>372</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1971 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1972 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1973 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1974 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTSAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMIHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIVEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAEGLDKISNWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1975 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV + SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL IHFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL VAIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1976 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1977 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1978 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1979 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1980 <Hit_num>13</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1981 <Hit_id>gi|525334458|gb|AGR46140.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1982 <Hit_def>baseplate hub subunit [Yersinia phage PST]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1983 <Hit_accession>AGR46140</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1984 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1985 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1986 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1987 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1988 <Hsp_bit-score>437.187</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1989 <Hsp_score>1123</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1990 <Hsp_evalue>1.95194e-142</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1991 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1992 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1993 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1994 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1995 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1996 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1997 <Hsp_identity>267</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1998 <Hsp_positive>373</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
1999 <Hsp_gaps>47</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2000 <Hsp_align-len>605</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2001 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNV-------AEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2002 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVEGAVSDTTAGSELIAETVEIGNNINKE---IGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKDAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIIEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2003 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV G+EL AE E K + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKKD + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL VAI++GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2004 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2005 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2006 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2007 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2008 <Hit_num>14</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2009 <Hit_id>gi|299780553|gb|ADJ39915.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2010 <Hit_def>baseplate hub subunit tail length determinator [Enterobacteria phage T4T]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2011 <Hit_accession>ADJ39915</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2012 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2013 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2014 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2015 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2016 <Hsp_bit-score>437.187</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2017 <Hsp_score>1123</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2018 <Hsp_evalue>2.03785e-142</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2019 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2020 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2021 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2022 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2023 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2024 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2025 <Hsp_identity>264</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2026 <Hsp_positive>371</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2027 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2028 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2029 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2030 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMIHFKYWSDKFSKAWDLFSTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTVAIVEGLGKVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAEGLDKISNWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2031 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL IHFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL VAIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2032 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2033 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2034 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2035 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2036 <Hit_num>15</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2037 <Hit_id>gi|330858710|ref|YP_004415085.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2038 <Hit_def>putative baseplate hub subunit and tail length determinator [Shigella phage Shfl2] &gt;gi|327397644|gb|AEA73146.1| putative baseplate hub subunit and tail length determinator [Shigella phage Shfl2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2039 <Hit_accession>YP_004415085</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2040 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2041 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2042 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2043 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2044 <Hsp_bit-score>424.091</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2045 <Hsp_score>1089</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2046 <Hsp_evalue>1.93327e-137</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2047 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2048 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2049 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2050 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2051 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2052 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2053 <Hsp_identity>261</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2054 <Hsp_positive>368</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2055 <Hsp_gaps>33</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2056 <Hsp_align-len>598</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2057 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2058 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISITDKISSMLFKYTVSAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTAAIVEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNTTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK--NKAQQAPVQQASPSINNTNNVVKKNTVV-HNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2059 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISITDKISSMLFKYTV+A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL AIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K N +Q+ ++ NT N+ H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2060 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2061 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2062 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2063 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2064 <Hit_num>16</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2065 <Hit_id>gi|397134209|gb|AFO10716.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2066 <Hit_def>baseplate hub protein [Escherichia phage ECML-134]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2067 <Hit_accession>AFO10716</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2068 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2069 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2070 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2071 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2072 <Hsp_bit-score>421.009</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2073 <Hsp_score>1081</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2074 <Hsp_evalue>3.75934e-136</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2075 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2076 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2077 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2078 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2079 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2080 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2081 <Hsp_identity>263</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2082 <Hsp_positive>373</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2083 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2084 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2085 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2086 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISISDKISSMLFKYTISAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFSSIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLSKEDQEKVANYQDKRMNGDLGPIAEGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEQYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2087 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISI+DKISSMLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SLS++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R E+Y D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2088 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2089 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2090 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2091 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2092 <Hit_num>17</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2093 <Hit_id>gi|116326412|ref|YP_803132.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2094 <Hit_def>base plate hub [Enterobacteria phage RB32] &gt;gi|115344005|gb|ABI95014.1| base plate hub [Enterobacteria phage RB32]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2095 <Hit_accession>YP_803132</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2096 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2097 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2098 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2099 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2100 <Hsp_bit-score>407.527</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2101 <Hsp_score>1046</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2102 <Hsp_evalue>5.49342e-131</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2103 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2104 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2105 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2106 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2107 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2108 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2109 <Hsp_identity>261</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2110 <Hsp_positive>372</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2111 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2112 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2113 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2114 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIIGAIDNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPAPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISISDKISSMLFKYTISAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDEIKKFWEAGDWGGLTVAIVEGLGKVLYNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNTTNASLSKEDQEKVANYQYKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAEEEEKLKQLSPEEAKIALMKANEARAAMNRFDQYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2115 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N +I ++DNV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISI+DKISSMLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + +IKKFWEAGDW GL VAIV+GL V+YNL E++ LG++K+SA+IL + G ++ A + G ALE FQ T SLS++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R +E + LK ++PE+ + L+K NEARAA+ R ++Y D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2116 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2117 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2118 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2119 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2120 <Hit_num>18</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2121 <Hit_id>gi|639438842|ref|YP_009030799.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2122 <Hit_def>baseplate hub subunit tail length determinator [Escherichia phage e11/2] &gt;gi|628971670|gb|AHY83392.1| baseplate hub subunit tail length determinator [Escherichia phage e11/2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2123 <Hit_accession>YP_009030799</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2124 <Hit_len>590</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2125 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2126 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2127 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2128 <Hsp_bit-score>399.823</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2129 <Hsp_score>1026</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2130 <Hsp_evalue>4.84152e-128</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2131 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2132 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2133 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2134 <Hsp_hit-to>590</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2135 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2136 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2137 <Hsp_identity>255</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2138 <Hsp_positive>369</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2139 <Hsp_gaps>41</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2140 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2141 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGV----ASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFP-PVPQEP--ENNKKDQKKD--DKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2142 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDAQAASELIAQTVEEKSNEIVGAIGNVESAVSDTTAGSELIAETVEIGNNINKEIGESLGSKLDKLTSLLEQKIQTA--GIQQTGTSLATVESAIPVKVVEDDTAESVG---PLLPAPEAVNNDPDADFFPTPQPVEPKQESPEEKQKKEAFNLKLSQALDKLTKTVDFGFKKSISISDKISSMLFKYTISAAIEAAKMTAMILAVVVGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFSSIDKIQQFWEKGDWGGLTAAIIEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNTTGASLNKEDQEKVANYQYKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTSDEERAEEEEKLKQLSPEEAKIALMKANEARAAMNRFEKYADSADMSKDSTVKSVESAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2143 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++ NV SE E+++ + ++ KL KL S+LE K+Q +Q++G S +T S I K+ + D ES G +LP + NN PD DFFP P P EP E+ ++ QKK+ + K + L L KT GFK +ISI+DKISSMLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + I++FWE GDW GL AI++GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R +E + LK ++PE+ + L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2144 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2145 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2146 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2147 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2148 <Hit_num>19</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2149 <Hit_id>gi|398313740|emb|CCI89087.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2150 <Hit_def>phage baseplate hub [Yersinia phage phiD1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2151 <Hit_accession>CCI89087</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2152 <Hit_len>369</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2153 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2154 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2155 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2156 <Hsp_bit-score>308.531</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2157 <Hsp_score>789</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2158 <Hsp_evalue>1.22596e-95</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2159 <Hsp_query-from>218</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2160 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2161 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2162 <Hsp_hit-to>369</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2163 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2164 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2165 <Hsp_identity>169</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2166 <Hsp_positive>239</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2167 <Hsp_gaps>26</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2168 <Hsp_align-len>377</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2169 <Hsp_qseq>MLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFM-------SNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGII----DKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTP--KPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2170 <Hsp_hseq>MLFKYTISAAIEAAKMTAMILAVVIGIDLLMVHFKYWSDKFSKAWDLFNTDFTKFSSETGTWGPLLQSIFDSIDKIKQLWEAGDWGGLTAAIVEGLGSVLFNLGELIQLGMAKLSAAILRVIPGMKDTADEVEGRALENFQNSTGASLNKEDQEKVANYQDKRMNGDLGPIAKGLDKIANWKTRASNWIRGVDNKEALTTDEERAAEEEKLKQLSPEERKNALMKANEARAAMIRFEKYADSADMSKDSTVKSVEAAYEDLKKRMDDPDLNNSPAVKKELAARFSKIDATYQELKK-NQPNAKPETSAKSPEAKQVQVIEK-------NKAQQAPVQQASPSINNTNNVIKKNTVVHNMTPVTSTTAPGVFDATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2171 <Hsp_midline>MLFKYT++A EAAKM AM+ A+V+GIDLL +HFKYW+DKF ++F +FS+E G WG LLQSIF + IK+ WEAGDW GL AIV+GL V++NL E++ LG++K+SA+IL + G ++ A + G ALE FQ TG SL+++DQ+ +A YQ KR+ G I DK +KTRA +W+ G +NK T +R E + LK ++PE+R+ L+K NEARAA+ R EKY D + ++S+E AY KK + D +++ PA KKEL RF ++++ YQ+LK+ N P KP A S + ++VQ I+K +K + A+ +NN NN + +H + VT+T APGVF ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2172 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2173 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2174 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2175 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2176 <Hit_num>20</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2177 <Hit_id>gi|431809132|ref|YP_007236029.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2178 <Hit_def>phage baseplate hub [Yersinia phage phiR1-RT] &gt;gi|398313421|emb|CCI88770.1| phage baseplate hub [Yersinia phage phiR1-RT]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2179 <Hit_accession>YP_007236029</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2180 <Hit_len>582</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2181 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2182 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2183 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2184 <Hsp_bit-score>298.516</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2185 <Hsp_score>763</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2186 <Hsp_evalue>2.81533e-89</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2187 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2188 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2189 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2190 <Hsp_hit-to>582</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2191 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2192 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2193 <Hsp_identity>217</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2194 <Hsp_positive>334</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2195 <Hsp_gaps>46</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2196 <Hsp_align-len>602</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2197 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLID-------SVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDE---PE---SPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPT--DMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRI--EEGPGIIDKAGEFKTRAFDWVL--GRENKIDSTQASDRDQ--ETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKY--QKLKEDNTPKPAAPATSEDNQRVQNIQK-AENAKEQSKKSTGDMNVANT--QVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2198 <Hsp_hseq>MKQPSQQNSFRRKVIEDSKPERDAASAANSQSTSLDSIDSKLSDVQAASELTSEVVEAKTDQLIDTIGQLKGSVQDVQAASELAVDAIGDSNSYLKSIDTVSQAINAKLAQLTSMLEAKFG--DQLAPLNAPNPVSG------ALPEPVPVVLPEDFIGPMLP--TVPDTDPNEEVLPEPPRREPEPKSEEDKKSSSEGDEKNTISEKLDLLIRTTQSGFKTAVGYSDKISNMLFKFTLTAIAQAAKTAAMILGIILAIDVIKANFTFWAEKFSTNFTEFAERAKEWGPLIESVVGMVRNISDAWNSDDPLGIIKAIAFGLSDITKQLADLLGLAVAKLTAGILRALGFNDKADALEGSYLKGYQDRTGSVMSEGHQKLIAKADNQKIKDEHDTTAYDQFKGMDQRGYDQAYKNGSMSK-DTYEALSKGEAKASDPLQGLSEEERLNVIIKRNEAQAAINRTKDYSTKIDPNNEREVNSLNKALADIKSRLDDPEISKIPESKSDLTRQFNELNNKTSANKLK---------PAPIAENQEVQTTKRVAELQKQNDTQSVNKGPTQNTVVQANTTNTSRTMYNMPPTTNIPAPGMRAALGTN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2199 <Hsp_midline>MK + RRKVI DSK ERDAAS A+ Q SL+ I KL DVQ+A+EL +EV+E K + LID SV +V +ELA +A + +K++ V+ I+ KL++L SMLE+K +Q + + +G LP+P PE P LP +P D N + E + E +KK + D+K T + L L++TT+ GFK + +DKIS+MLFK+T+TA+A+AAK AAM+ ++L ID+++ +F +W +KF +NF EF+ A EWG L++S+ GM+ +I W + D G+ AI GL+D+ L++++ L ++K++A IL ALGF + A + GS L+G+Q+RTG+ +SE QK +AK +++I E D+ R +D G +K D+ +A + + + L+ ++ E+R +IK+NEA+AA+ R + Y +DP N + SL KA K + D IS P +K +L ++F + +K KLK PA +NQ VQ ++ AE K+ +S NT Q N N S+T++ + T PAPG+ A G N</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2200 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2201 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2202 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2203 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2204 <Hit_num>21</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2205 <Hit_id>gi|422934216|ref|YP_007004252.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2206 <Hit_def>baseplate hub subunit [Enterobacteria phage Bp7] &gt;gi|345450725|gb|AEN93928.1| baseplate hub subunit [Enterobacteria phage Bp7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2207 <Hit_accession>YP_007004252</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2208 <Hit_len>578</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2209 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2210 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2211 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2212 <Hsp_bit-score>269.24</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2213 <Hsp_score>687</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2214 <Hsp_evalue>3.573e-78</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2215 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2216 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2217 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2218 <Hsp_hit-to>578</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2219 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2220 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2221 <Hsp_identity>204</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2222 <Hsp_positive>331</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2223 <Hsp_gaps>54</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2224 <Hsp_align-len>604</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2225 <Hsp_qseq>MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKP-TDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2226 <Hsp_hseq>MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNISDVLSDSQAASELLSEVVETKSNQIISSVDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVVEDILPPED---NKPDAEFMP----EPPKNSDEGKEGDKTSLSDKIEALTKITEKGFKASIGVADRISGMLFKYTITAAAEAAKLAAGLVLLIFGIDAIRVYFQYFMDQFESGWKEFNDKFKEWGPLLEGLMTWAKNAEAMFSEGNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGELAENVEASALMSYQQNTGATLDVEDQTKVAKYHDRRSAEALETAEKMNKKYKDKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENAKAFKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2227 <Hsp_midline>MK+E N ++ RR K+I + +R A + A Q D L I L D Q+A+EL++EV+E K N +I SVD +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F P EP N + K+ DK +D + L K T+ GFKA+I + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F S + EF+ + EWG LL+ + + + + G+W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G A + SAL +Q+ TG +L +DQ +AKY +R E P +I++A ++ L +E + D +A D ++L E+R E K+++A+A + RL + ++ + ++++ + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2228 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2229 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2230 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2231 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2232 <Hit_num>22</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2233 <Hit_id>gi|314121771|ref|YP_004063890.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2234 <Hit_def>gp29 baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM-VR7] &gt;gi|313151528|gb|ADR32584.1| gp29 baseplate hub subunit tail length determinator [Enterobacteria phage vB_EcoM-VR7]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2235 <Hit_accession>YP_004063890</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2236 <Hit_len>581</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2237 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2238 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2239 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2240 <Hsp_bit-score>269.24</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2241 <Hsp_score>687</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2242 <Hsp_evalue>3.63307e-78</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2243 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2244 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2245 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2246 <Hsp_hit-to>581</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2247 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2248 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2249 <Hsp_identity>186</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2250 <Hsp_positive>328</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2251 <Hsp_gaps>58</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2252 <Hsp_align-len>606</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2253 <Hsp_qseq>KSENMSTMRR----RKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2254 <Hsp_hseq>KNSEQTSFRRGGPNKKLIEELAPQRRAEALSAEQNDELSNLNTTLTNTQAATELVSEAIEDKGNQIIENIQTNNGVLQDISAGVELTAEATEKTQQGIKNLTDI---LSDKLDKLSAMISGKIGVT------SPVAGSESLKPVEDALPEPEENKPTASVPALIPPEEQK---PDADFIPE-PEQPKTDAEGKETNTWSLGDKLDTLSKITEKGFKASISVADRISGMLFKYTITAAAEAAKLIGGLLLLVFGIDAIRVYFQYFMKQFEKGWAEFNDKFKEWGPLLEGLMTWAKNAEAMFSERNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLADNVEASALMSYQQNTGATLDDEDQTKIAKYHDKRSAEAMKTAEKMNKKYKDKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLDYFKKRDKTQADIIRLTQTADNLMKPDATDKKNAEASYKAIQEQLADPVMAKGGAPKDLNMHALLEKLDKSLEKFKDEPKVKPPDVKASPDAQQAAKVDEGMKAKENKYKDAP----ANAQINTVNNIQKTSRTQYNMPPQSSTPAPGMRQATRIN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2255 <Hsp_midline>K+ ++ RR +K+I + +R A + +++Q D L + L + Q+A ELV+E IE+KGN +I+++ +++ G EL AEA+E+T + IK LT + +SDKL KL++M+ K+ S + S L +ED LP+P+E + ++PP + PD DF P P++P+ + + ++ + D L L K T+ GFKA+IS+ D+IS MLFKYT+TA AEAAK+ L LV GID +R++F+Y+ +F + EF+ + EWG LL+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY KR E P +I++A ++ L +E + D +A D ++L E+R + K+++ +A + RL + ++ + T+ ++ E +Y + ++ ++D ++ A K + ++++ +K K++ KP S D Q+ + + AKE K AN Q+N VNN S+T + + ++TPAPG+ AT +N</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2256 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2257 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2258 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2259 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2260 <Hit_num>23</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2261 <Hit_id>gi|299779140|ref|YP_003734334.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2262 <Hit_def>29 gene product [Enterobacteria phage IME08] &gt;gi|298105869|gb|ADI55513.1| gp29 baseplate hub subunit [Enterobacteria phage IME08]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2263 <Hit_accession>YP_003734334</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2264 <Hit_len>578</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2265 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2266 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2267 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2268 <Hsp_bit-score>266.929</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2269 <Hsp_score>681</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2270 <Hsp_evalue>2.99001e-77</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2271 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2272 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2273 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2274 <Hsp_hit-to>578</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2275 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2276 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2277 <Hsp_identity>203</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2278 <Hsp_positive>335</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2279 <Hsp_gaps>56</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2280 <Hsp_align-len>605</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2281 <Hsp_qseq>MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKP-TDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNS-AKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2282 <Hsp_hseq>MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNISDVLSDSQAASELLSEVVETKSNQIISSVDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVVEDILPPED---NKPDAEFVP----EPPKNSDEGKEGAKSPLSEKIEALTKITEKGFKASVGVADRISGMLFKYTITAAAEAAKLAAGLVLLIFGIDAIRVYFQYFMDQFEAGWKEFNDKFKEWGPLLEGLMTWAKNAEAMFSEGNWLGLAEAIIRGMVNLTKNMAQLLMVGISKLISAILSKIPGMGELAENVEASALMSYQQNTGATLDDEDQTKVAKYHDRRSAEALETAEKMNKKYKNKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENA-KAYKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2283 <Hsp_midline>MK+E N ++ RR K+I + +R A + A Q D L I L D Q+A+EL++EV+E K N +I SVD +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F P EP N + K+ K P ++ + L K T+ GFKA++ + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F + + EF+ + EWG LL+ + + + + G+W GLA AI++G+ ++ N+++++ +GISK+ ++IL + G A + SAL +Q+ TG +L ++DQ +AKY +R E P +I++A ++ L +E + D +A D ++L E+R E K+++A+A + RL + ++ + ++++ KAY + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2284 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2285 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2286 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2287 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2288 <Hit_num>24</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2289 <Hit_id>gi|308814556|ref|YP_003934830.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2290 <Hit_def>baseplate hub subunit tail length determinator [Shigella phage SP18] &gt;gi|308206148|gb|ADO19547.1| baseplate hub subunit tail length determinator [Shigella phage SP18]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2291 <Hit_accession>YP_003934830</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2292 <Hit_len>581</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2293 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2294 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2295 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2296 <Hsp_bit-score>265.388</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2297 <Hsp_score>677</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2298 <Hsp_evalue>1.10381e-76</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2299 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2300 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2301 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2302 <Hsp_hit-to>581</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2303 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2304 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2305 <Hsp_identity>188</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2306 <Hsp_positive>331</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2307 <Hsp_gaps>60</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2308 <Hsp_align-len>607</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2309 <Hsp_qseq>KSENMSTMRR----RKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKR--FQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNN----SKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2310 <Hsp_hseq>KNSEQTSFRRGGPNKKLIEELAPQRRAEALSAEQNDELSNLNTTLTNTQAATELVSEAIEDKGNQIIENIQTNNGVLQDISAGVELTAEATEKTQQGIKNLTDI---LSDKLDKLSAMISGKLGVT------SPVAGSESLKPVEDALPEPEENKPTASVPTLIPPEEQK---PDADFIPE-PEQPKTDAEGKETNTWSLGDKLDTLSKITEKGFKASISVADRISGMLFKYTITAAAEAAKLIGGLLLLVFGIDAIRVYFQYFMKQFEKGWAEFNDKFKEWGPLLEGLMTWAKNAQAMFSEKNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLADNVEASALMSYQQNTGATLDDEDQTKIAKYHDKRSAEAMEATEKMNKKYKDKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLDYFKKRDKAQADIIRLTQTADNLMKPDATDKKNAMEMRANIEKQLADPSMAKGGAP-KDLNMRALLEKLDKSLEKFKDEPKVKPPDVKTSPDAQQAAKVDEGMKAKENKYKDAP----AQAQINTVNNIQKTSRTQYNMPPQSSTPAPGMRQATRIN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2311 <Hsp_midline>K+ ++ RR +K+I + +R A + +++Q D L + L + Q+A ELV+E IE+KGN +I+++ +++ G EL AEA+E+T + IK LT + +SDKL KL++M+ K+ S + S L +ED LP+P+E + ++PP + PD DF P P++P+ + + ++ + D L L K T+ GFKA+IS+ D+IS MLFKYT+TA AEAAK+ L LV GID +R++F+Y+ +F + EF+ + EWG LL+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY KR E P +I++A ++ L +E + D +A D ++L E+R + K+++A+A + RL + ++ + T+ ++ + + +K ++D +++ A K+L+ R ++++ +K K++ KP TS D Q+ + + AKE K A Q+N VNN S+T + + ++TPAPG+ AT +N</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2312 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2313 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2314 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2315 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2316 <Hit_num>25</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2317 <Hit_id>gi|238695345|ref|YP_002922538.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2318 <Hit_def>gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage JS10] &gt;gi|220029481|gb|ACL78415.1| gp29 baseplate hub subunit, tail length determinator [Enterobacteria phage JS10]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2319 <Hit_accession>YP_002922538</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2320 <Hit_len>578</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2321 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2322 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2323 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2324 <Hsp_bit-score>262.692</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2325 <Hsp_score>670</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2326 <Hsp_evalue>1.03696e-75</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2327 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2328 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2329 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2330 <Hsp_hit-to>578</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2331 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2332 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2333 <Hsp_identity>198</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2334 <Hsp_positive>334</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2335 <Hsp_gaps>52</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2336 <Hsp_align-len>603</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2337 <Hsp_qseq>MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2338 <Hsp_hseq>MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNITEALSETQAASELLSEVVETKSNQIINSIDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVIEDILPPED---NKPDAEF---VPEPPKNSDEGKEGDKSSLSDKIEALTKITEKGFKASIGVADRISGMLFKYTITAAAEAAKLAAGLALLIFGIDAIRVYFQYFMDQFNEGWKKFNDKFKEWGPLLEGLMTWAKNAEAMFSERNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLAENVEASALMSYQQNTGATLDDEDQTKVAKYHDRRSAEALETAEKMNKKYKGKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRNLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENAKAFKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2339 <Hsp_midline>MK+E N ++ RR K+I + +R A + A Q D L I L + Q+A+EL++EV+E K N +I+S+D +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F VP+ P+N+ + ++ D +D + L K T+ GFKA+I + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F + +F+ + EWG LL+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY +R E P +I++A ++ L +E + D +A D +NL E+R E K+++A+A + RL + ++ + ++++ + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2340 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2341 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2342 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2343 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2344 <Hit_num>26</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2345 <Hit_id>gi|161622623|ref|YP_001595318.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2346 <Hit_def>gp29 baseplate hub subunit tail length determinator [Enterobacteria phage JS98] &gt;gi|52139948|gb|AAU29318.1| gp29 baseplate hub subunit tail length determinator [Enterobacteria phage JS98]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2347 <Hit_accession>YP_001595318</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2348 <Hit_len>578</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2349 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2350 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2351 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2352 <Hsp_bit-score>259.225</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2353 <Hsp_score>661</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2354 <Hsp_evalue>1.72858e-74</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2355 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2356 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2357 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2358 <Hsp_hit-to>578</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2359 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2360 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2361 <Hsp_identity>196</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2362 <Hsp_positive>334</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2363 <Hsp_gaps>52</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2364 <Hsp_align-len>603</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2365 <Hsp_qseq>MKSE-NMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVD-------NVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLP---ERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG--------------PGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKK-ELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2366 <Hsp_hseq>MKNESNQNSFRRNKLIEEMAPQRRAEALAQTQNDELGNITEALSETQAASELLSEVVETKSNQIINSIDRVDKSVQDVVAGTELTAEAISEQTQQSKALS---DALNEKINKLSNMLEAKFSGI--SIPPEGSS----LKVIEDSIPEEPKAETPKVPAVIEDILPPED---NKPDAEF---VPEPPKNSDEGKEGDKSSLSDKIEALTKITEKGFKASIGVADRISGMLFKYTITAAAEAAKLAAGLALLIFGIDAIRVYFQYFMDQFNEGWKKFNDKFKEWGPVLEGLMTWAKNAEAMFSERNWLGLAEAIIRGMVNLTKNMAQLLMLGISKLISAILSKIPGMGDLAENVEASALMSYQQNTGATLDDEDQTKVAKYHDRRSAEALETAEKMNKKYKGKPELINQAEKYGN------LTKE-QADQLRAGGIDTSFRDLPE---EERLEYFKKRDKAQADIIRLTQTADNIMKPDSKDIENAKAFKADIEKQLADPIMAKGGAPKDLNIQQLLDKMNKSLEKFNEAEKPKPASVAESPENTQVKKVDEQMRAKENAKYSQQAPTQINQQTNIKKTSKTSYNLPPQSSTPAPGMRQATKVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2367 <Hsp_midline>MK+E N ++ RR K+I + +R A + A Q D L I L + Q+A+EL++EV+E K N +I+S+D +V GTEL AEA T+ K L+ +++K++KL++MLE+K + + G+S L VIED +P+ + E+P +P E ILPP D N PD +F VP+ P+N+ + ++ D +D + L K T+ GFKA+I + D+IS MLFKYT+TA AEAAK+AA L L+ GID +R++F+Y+ D+F + +F+ + EWG +L+ + + + + +W GLA AI++G+ ++ N+++++ LGISK+ ++IL + G + A + SAL +Q+ TG +L ++DQ +AKY +R E P +I++A ++ L +E + D +A D ++L E+R E K+++A+A + RL + ++ + ++++ + +K ++D ++ A K + + ++ +K E PKPA+ A S +N +V+ + + AKE +K S N Q N SKT + + ++TPAPG+ AT VN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2368 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2369 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2370 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2371 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2372 <Hit_num>27</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2373 <Hit_id>gi|311992691|ref|YP_004009559.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2374 <Hit_def>gp29 baseplate hub subunit [Acinetobacter phage Ac42] &gt;gi|298684474|gb|ADI96435.1| gp29 baseplate hub subunit [Acinetobacter phage Ac42]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2375 <Hit_accession>YP_004009559</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2376 <Hit_len>569</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2377 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2378 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2379 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2380 <Hsp_bit-score>227.639</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2381 <Hsp_score>579</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2382 <Hsp_evalue>7.65187e-63</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2383 <Hsp_query-from>1</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2384 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2385 <Hsp_hit-from>1</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2386 <Hsp_hit-to>569</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2387 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2388 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2389 <Hsp_identity>183</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2390 <Hsp_positive>306</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2391 <Hsp_gaps>91</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2392 <Hsp_align-len>618</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2393 <Hsp_qseq>MKSENMSTMRRRKVIADSKGERDAASTASDQVDSLEL---------IGLKLDDVQSANELVAEVIE------EKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDE--PESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTT-KGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGE------------WGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGI----SKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGP-----GIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPAT-SEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNN--VNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2394 <Hsp_hseq>MAQQSLKSEVRDRVLAKSASLRDARKQIIDKANSQTLKPQESPQEAVQTPIDDLSPVSSTMSQALQQSSTSNEIGRASLDELHNISESSKL---------------------INQRLQKLSTLLESKFVNAETKPVELNERA---VDVIKDYVEKPEQKVPEPNPIP-KLLPGIEYTSSLGD-------TKDDQSKTVDQKE---KREDANGTGVKSILKTGFGKTVSVIDRISGFLFKYTLSAAIASAKIVGGLFALILGFDLLRIHFKYWGEKLMEKFDQISDWFGENISAPFNALLERWTPVFESIMDSVGFVKRAWENGDWG----ALISGIGSAIDTATTSLLVGIQSALAKLGAAILDKLGFKDAADNLEGAAIQNKQNHTDAVLSDKEKIALAEYQKKNIEKGEAPSRGGITSFLPDSWRKNLDLITEQ----DYNQIKAEEKDMGRLKSMSSDDQTKVLIKNNEAKDALDRYAEAGRKLDVNNEQDKARLNKLYNEASTRVKDKDLSNTPEVQKHLEGRLERIKNSINAKKVKVEPAPSNESKDATTASRIQAIDSKKNS------SAGNGNASNTNVQNNIVKSNRQINIQAPVTSSNAPGIFKATSAN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2395 <Hsp_midline>M +++ + R +V+A S RDA D+ +S L + +DD+ + +++ ++ E G +D + N++E ++L I+ +L KL+++LESK E K E A + VI+D + P++ PE +P ++LP ++ ++L D ++ ++ DQK+ K D G +K+ K GF T+S+ D+IS LFKYT++A +AK+ LFAL+LG DLLRIHFKYW +K M FD+ S GE W + +SI +G +K+ WE GDW A++ G+ I + + +GI +K+ A+ILD LGF++AA + G+A++ Q T LS+ ++ ALA+YQ K IE+G GI + + D + + D Q +++ LK+M+ + + + LIK NEA+ A+ R + +D N + L K YN A + D +S+ P +K L+ R +R+++ K P P+ + + R+Q I +N+ S G+ N +NT V N V +++ I+ VT++ APG+F AT N</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2396 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2397 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2398 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2399 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2400 <Hit_num>28</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2401 <Hit_id>gi|639438514|ref|YP_009030254.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2402 <Hit_def>baseplate hub subunit, tail length determinator [Serratia phage PS2] &gt;gi|625370587|gb|AHY25447.1| baseplate hub subunit, tail length determinator [Serratia phage PS2]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2403 <Hit_accession>YP_009030254</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2404 <Hit_len>572</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2405 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2406 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2407 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2408 <Hsp_bit-score>211.46</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2409 <Hsp_score>537</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2410 <Hsp_evalue>6.69261e-57</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2411 <Hsp_query-from>42</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2412 <Hsp_query-to>570</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2413 <Hsp_hit-from>35</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2414 <Hsp_hit-to>566</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2415 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2416 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2417 <Hsp_identity>158</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2418 <Hsp_positive>276</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2419 <Hsp_gaps>33</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2420 <Hsp_align-len>547</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2421 <Hsp_qseq>LDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDP-DEPESPGLPERILP-PL-DDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDAL-GFENAATTIRGSALEGFQERTGNSLSEDD-QKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGREN------KIDSTQAS--DRDQETQNLKAMAPEK----REETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKY-QKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2422 <Hsp_hseq>LDDIVEANELIADRVEDNTNRSVAAQEDSTAATELVAENTEHGNKHLSNIADTARQISSKLSEFADRLNSKIEASVQSGLPAIGNQATAIQAIEEQINTPLNEEVLADAIEKLLPMPVKSETDVFPEPEKPKEPEQNPQEDKREEERKDKEKSQASEKILSAVKGGFKSTYGLLNNIAGSLFKYTITAAANMLKWAGIMFAIVFAIDLIRVHFKYWQKVFEKSLDELNEQVGAWGPILTDIFNTAQEMRDYWAKGQYGDLVTSLVQGIGRTLLDLGHMIMFGIGKAIASMLDAIPGMSETAKKVEGRAIRTYSEQTGYVPDEEERQKVIAVEKYDQGQQYKDLKDEANKYTEDQFVKKTGNRGFLNDGISLNETQARQIHKDIRSGKLKDSDIEKEIGIQADLAMRMNTIENRVQRTSG--------SPSTNAELMDNLSKLAKDIGNADI--QSYMKEPLQERVQKMESALAERTKPKVTPKPAAE--SAEATQVKEVEATIKPKETASTNAG---TTLNNINNVRNSRTVVQVQPRSSIPSGGIM</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2423 <Hsp_midline>LDD+ ANEL+A+ +E+ N + + ++ TEL AE +E + + + A IS KLS+ A L SK++A Q + + +T + IE+++ P +E E++LP P+ + + P+ + Q P+ +K+++++ DK+ + +L KGGFK+T + + I+ LFKYT+TA A K A ++FA+V IDL+R+HFKYW F + DE + + G WG +L IF +++ +W G + L ++V+G+ + +L ++ GI K AS+LDA+ G A + G A+ + E+TG E++ QK +A + + ++ + D+A ++ F G ++ TQA +D + LK EK + + ++ N VQR +P+ L + K I ++ I Q K+ L +R Q++ES ++ K TPKPAA S + +V+ ++ KE + + G +NNV NS+T+ QVQ ++ P+ G+ </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2424 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2425 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2426 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2427 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2428 <Hit_num>29</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2429 <Hit_id>gi|238695064|ref|YP_002922258.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2430 <Hit_def>tail length regulator [Enterobacteria phage JSE] &gt;gi|220029200|gb|ACL78135.1| tail length regulator [Enterobacteria phage JSE]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2431 <Hit_accession>YP_002922258</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2432 <Hit_len>577</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2433 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2434 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2435 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2436 <Hsp_bit-score>204.527</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2437 <Hsp_score>519</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2438 <Hsp_evalue>2.33408e-54</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2439 <Hsp_query-from>22</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2440 <Hsp_query-to>570</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2441 <Hsp_hit-from>13</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2442 <Hsp_hit-to>572</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2443 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2444 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2445 <Hsp_identity>167</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2446 <Hsp_positive>299</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2447 <Hsp_gaps>83</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2448 <Hsp_align-len>596</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2449 <Hsp_qseq>RDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDN-------VAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQE-PE-NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIY----NLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF-----KTRAFDWVLGR--ENKIDSTQASD--RDQETQNLKAMAPEKREETLIK------QNEARAAVQRL---------------EKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDN----QRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2450 <Hsp_hseq>KEAEENPIDKLNKLDKLN-SIDNLQAATELVAETVEQKSNEVVGAVEDNTAANELTAENTQSTAGNTQKTYEELQKLNNFSSQMNEKLRGFGVMMERRFGVV--------SKMASGIGAIEEALKKPEQPQTMPSPQPVLPTVPEQ---PNNDNYQGLPKKKPDADDRKKKNATDKRNADSMENLLKVVRGGFKETIGISNKVLGMLFKITLTAMAEAAKWGAILMGIVFVIDTLMVHFRYWSDLFETKFNEFMDKAGGWAGPISDILTTVRQVRDYWSKGEYGELIKSLVMGIGDAFYKTFIQLDRIITTGIAKILRMI---PGMGDYADKLEYGALKSAVAQ-GYTPNERELELMDKVESEHEE------DKYGERTGWTGKARDIGEAIGESIKDKVNEGLVSLGWRDQ-----KDVDAEKRQEELKRGEYKSVSAEQRSASRKLRIKSEGAINNINEVMENLSGDYDKE---RMGELKKDIDVYREQVQDPTLVE--SDRSQLERLIEKFDEMYADKTKGVVPTKSVPATETETAKQAERTEQMQKQAAIQQQTTNQTS--NVNNTQI--VTNNRTIKQGAPTTRIDAPGTI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2451 <Hsp_midline>++A D+++ L+ + +D++Q+A ELVAE +E+K N ++ +V++ AE T+ A +++T E ++ L +S +++KL M+E + V + ++G+ IE+ L P++P++ P+ +LP + + P+ D + +P++ P+ +++K + DK+ D + +LLK +GGFK TI I++K+ MLFK T+TA+AEAAK A+L +V ID L +HF+YW+D F + F+EF +AG W G + I + ++ +W G++ L ++V G+ D Y L I++ GI+KI I G + A + AL+ + G + +E + + + K +S+ E DK GE K R +G ++K++ S RDQ K + EKR+E L + E R+A ++L E GD D E M L+K + ++ + D + + + + +L++ ++ + Y + P + PAT + +R + +QK ++Q+ T NV NTQ+ V N++TI Q T APG </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2452 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2453 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2454 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2455 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2456 <Hit_num>30</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2457 <Hit_id>gi|157311483|ref|YP_001469526.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2458 <Hit_def>gp29 baseplate hub subunit tail length determinator [Enterobacteria phage Phi1] &gt;gi|149380687|gb|ABR24692.1| gp29 baseplate hub subunit tail length determinator [Enterobacteria phage Phi1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2459 <Hit_accession>YP_001469526</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2460 <Hit_len>577</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2461 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2462 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2463 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2464 <Hsp_bit-score>200.675</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2465 <Hsp_score>509</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2466 <Hsp_evalue>5.33273e-53</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2467 <Hsp_query-from>42</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2468 <Hsp_query-to>570</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2469 <Hsp_hit-from>32</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2470 <Hsp_hit-to>572</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2471 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2472 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2473 <Hsp_identity>163</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2474 <Hsp_positive>286</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2475 <Hsp_gaps>82</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2476 <Hsp_align-len>576</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2477 <Hsp_qseq>LDDVQSANELVAEVIEEKGNNLIDSVDNVAEGTELAAEASE-------RTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQE-PE-NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIY----NLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF-----KTRAFDWVLGR--ENKIDSTQASD--RDQETQNLKAMAPEKREETLIK------QNEARAAVQRL---------------EKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDN----QRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2478 <Hsp_hseq>IDNLQAATELVAETVEQKSNEVVGAVEDNTAANELTAENTQSTAGNTKKTYEELQKLNNFSSQMNEKLRGFGVMMERRFGVV--------SKMASGIGAIEEALKKPEQPQTMPSPQPVLPTVPEQ---PNNDNYQGLPKKKPDVDDRKKKNAADKRNADSMENLLKVVRGGFKETIGISNKVLGMLFKITLTAMAEAAKWGAILMGIVFVIDTLMVHFRYWSDLFETKFNEFMDKAGGWAGPISDILTTVRQVRDYWSKGEYKELIKSLVMGIGDAFYKTFIQLDRIITTGIAKILRMI---PGMGDYADKLEYGALKSAVAQ-GYTPNERELELMDKVESEHEE------DKYGERTGWTGKARDIGEAIGDSIKDKVNEGLVSLGWRDQ-----KDVDAEKRQEELKRGEYKSVSAEQRSASRKLRIKSEGAINNINEVMENLSGDYDKE---RMGELKKDIDVYREQVQDPTLVE--SDRSQLERLIEKFDEMYADKTNGVVPTNPVPATETETAKQAERTEQMQKQAAIQQQTTNQTS--NVNNTQI--VTNNRTVKQGAPTTRIDAPGTI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2479 <Hsp_midline>+D++Q+A ELVAE +E+K N ++ +V++ EL AE ++ +T E ++ L +S +++KL M+E + V + ++G+ IE+ L P++P++ P+ +LP + + P+ D + +P++ P+ +++K + DK+ D + +LLK +GGFK TI I++K+ MLFK T+TA+AEAAK A+L +V ID L +HF+YW+D F + F+EF +AG W G + I + ++ +W G++ L ++V G+ D Y L I++ GI+KI I G + A + AL+ + G + +E + + + K +S+ E DK GE K R +G ++K++ S RDQ K + EKR+E L + E R+A ++L E GD D E M L+K + ++ + D + + + + +L++ ++ + Y P PAT + +R + +QK ++Q+ T NV NTQ+ V N++T+ Q T APG </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2480 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2481 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2482 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2483 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2484 <Hit_num>31</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2485 <Hit_id>gi|33620639|ref|NP_891750.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2486 <Hit_def>tail length regulator [Enterobacteria phage RB49] &gt;gi|33438535|gb|AAL15120.2| tail length regulator [Enterobacteria phage RB49]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2487 <Hit_accession>NP_891750</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2488 <Hit_len>577</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2489 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2490 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2491 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2492 <Hsp_bit-score>200.675</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2493 <Hsp_score>509</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2494 <Hsp_evalue>5.38583e-53</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2495 <Hsp_query-from>42</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2496 <Hsp_query-to>570</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2497 <Hsp_hit-from>32</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2498 <Hsp_hit-to>572</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2499 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2500 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2501 <Hsp_identity>164</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2502 <Hsp_positive>284</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2503 <Hsp_gaps>82</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2504 <Hsp_align-len>576</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2505 <Hsp_qseq>LDDVQSANELVAEVIEEKGNNLIDSVDN-------VAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQE-PE-NNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIY----NLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEF-----KTRAFDWVLGR--ENKIDSTQASD--RDQETQNLKAMAPEKREETLIK------QNEARAAVQRL---------------EKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDN----QRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVF</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2506 <Hsp_hseq>IDNLQAATELVAETVEQKSNEVVGAVEDNTAANELTAENTQSTAGNTQKTYEELQKLNNFSSQMNEKLRGFGVMMERRFGVV--------SKMASGIGAIEEALKKPEQPQTMPSPQPFLPTVPEQ---PNNDNYQGLPKKKPDVDDRKKKNATDKRNADSMENLLKVVRGGFKETIGISNKVLGMLFKITLTAMAEAAKWGAILMGIVFVIDTLMVHFRYWSDLFETKFKEFMDKAGGWAGPISDILTTVRQVRDYWSKGEYKELIKSLVMGIGDAFYKTFIQLDRIITTGIAKILRMI---PGMGDYADNLEYGALKSAVAK-GYKPNERELELMDKVESEHEE------DKYGERTGWTGKARDIGEAIGESIKDKFNEGLVSLGWRDQ-----KDVDAEKRQEELKRGEYKSVSAEQRSASRKLKIKSEGAINNINEVMENLSGDYDKE---RMEELKKDIDVYREQVQDPTLVE--SDRSQLERLIEKFDEMYADKTNGVVPTNPVPATETETAKQAERTEQMQKQAAIQQQTTNQTS--NVNNTQI--VTNNRTIKQGAPTTRIDAPGTI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2507 <Hsp_midline>+D++Q+A ELVAE +E+K N ++ +V++ AE T+ A +++T E ++ L +S +++KL M+E + V + ++G+ IE+ L P++P++ P+ LP + + P+ D + +P++ P+ +++K + DK+ D + +LLK +GGFK TI I++K+ MLFK T+TA+AEAAK A+L +V ID L +HF+YW+D F + F EF +AG W G + I + ++ +W G++ L ++V G+ D Y L I++ GI+KI I G + A + AL+ + G +E + + + K +S+ E DK GE K R +G ++K + S RDQ K + EKR+E L + E R+A ++L E GD D E M+ L+K + ++ + D + + + + +L++ ++ + Y P PAT + +R + +QK ++Q+ T NV NTQ+ V N++TI Q T APG </Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2508 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2509 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2510 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2511 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2512 <Hit_num>32</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2513 <Hit_id>gi|392973136|ref|YP_006489094.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2514 <Hit_def>baseplate hub subunit [Acinetobacter phage ZZ1] &gt;gi|390058277|gb|AFL47731.1| baseplate hub subunit, tail length determinator [Acinetobacter phage ZZ1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2515 <Hit_accession>YP_006489094</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2516 <Hit_len>585</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2517 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2518 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2519 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2520 <Hsp_bit-score>195.667</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2521 <Hsp_score>496</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2522 <Hsp_evalue>4.41683e-51</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2523 <Hsp_query-from>112</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2524 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2525 <Hsp_hit-from>105</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2526 <Hsp_hit-to>585</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2527 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2528 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2529 <Hsp_identity>156</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2530 <Hsp_positive>246</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2531 <Hsp_gaps>32</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2532 <Hsp_align-len>489</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2533 <Hsp_qseq>KVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEP--ENNKKDQKKDDKKPTDMLGDLLKTTKG----GFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEW-----------GGLLQSIFGMLGD---IKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDK---AGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQT-VTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2534 <Hsp_hseq>KLAALSERLKEKYEAANDATVDLPVKAEEPTTSES--LSSRISPEDTNNNVIPSVVADDPKPSKDLLESTNEVKGAPSLGPAAMIVSGLQTLTGAVKTGFAKSKSVSDKIAGMLFKYTVTQAVNAAKIALAVFGIILALDLLKMAWNAWGEKIMAKFEEWTQTFSKWWDNFKEWSTYFSDMKYAFEGMQGDLMGIRNAWESGDWPALASAIGTAFVDGIKTLSGIMDRVITKLIATILNKLGFKDTAKSIEAEGLQRYQNMTNNKLDPENQQKLAEEQLKR-EKKDGLTSTQRGVTSFLPDSWREKLGFITKNEHSQIEAEKKDQKARQSLSKDDQVKVVAASNEAREAVARLENIAVNADPNNKGQMATLDKYRKEAQNYINNPALSKSPNVKAELQNQLDRLTPK-QSVK--NTVTPETSTASKDVQTAKNIQIAE--AQKAKTNAVQNNNTANVQNNIVKSSRQYNVQAPITGTAAPGIFKATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2535 <Hsp_midline>K+ A+ ++++E +A+ + K +P ES L RI P +NN +P P P + E+ + + P M+ L+T G GF + S++DKI+ MLFKYTVT AAK+A +F ++L +DLL++ + W +K M+ F+E++ +W + + GM GD I+ WE+GDW LA AI D I LS IM I+K+ A+IL+ LGF++ A +I L+ +Q T N L ++Q+ LA+ Q KR E+ G+ F ++ LG K + +Q ++ + ++++ + + + + NEAR AV RLE + DP N M +L+K A+ I++ A+S P K EL + R+ K Q +K NT P S+D Q +NIQ AE +++K + N NN+ S + VQ +T T APG+F ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2536 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2537 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2538 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2539 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2540 <Hit_num>33</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2541 <Hit_id>gi|326536335|ref|YP_004300776.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2542 <Hit_def>gp29 baseplate hub [Acinetobacter phage 133] &gt;gi|299483416|gb|ADJ19510.1| gp29 baseplate hub [Acinetobacter phage 133]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2543 <Hit_accession>YP_004300776</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2544 <Hit_len>582</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2545 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2546 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2547 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2548 <Hsp_bit-score>182.185</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2549 <Hsp_score>461</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2550 <Hsp_evalue>1.85312e-46</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2551 <Hsp_query-from>75</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2552 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2553 <Hsp_hit-from>84</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2554 <Hsp_hit-to>582</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2555 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2556 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2557 <Hsp_identity>164</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2558 <Hsp_positive>246</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2559 <Hsp_gaps>65</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2560 <Hsp_align-len>533</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2561 <Hsp_qseq>ELAAEASERTTESIKTLTGVASTISDK---LSKLASMLESKV-------QAVEQKVQESGASASTGLSVIED---KLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDE-------FSAEAGEWGGLLQSIFGMLGD----IKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEG-----PGIIDKAGEFKTRAFDWVLG--RENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2562 <Hsp_hseq>ELQQEAVEANTH----LEQIEKSTTDSNATLSKLSSQLESKFSGQVQSPQVVEHKTTEE---------IIKDFAEKSKSKTESTEPAILPAVLPEATKKPNLGGAT----TPKE-----QKAKSDSTKASHPAMKVFNVVKSGFKSVKSVGDKIAGFLFKGALTAAIEAAKMAGIIFLIIAAIDLVRIHFKYWTEKFSAKFDAVKEIIMGYFDRFGNWMESIMPMFSGLFDAIDYIRNVFAKGDWSALAGAIGNVMKEAFNSLGAMIQNGIAKLASILLRKFGFNDTADSIEAIGLENKQNMTNTPLTPEEQKKVAKQQQKMLDKDYTPTQTGIT----AFLPDKFRKAIGALSDGEYDQIQAEKKNM--SQLKGLNKEDQTNTIGAMNEARAALNRYENKVERLDPNDPNQAAKIDNAYKEAKTAISDPDLKNVPDVKIELENQLGKLQAKTGRAAPKPAPAANSPEAAQANSIA---RKTNEVKAPVAQAANNTNVNTTM---VKNNKSVHVQAPVTSTNAPGVFHGTGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2563 <Hsp_midline>EL EA E T L + + +D LSKL+S LESK Q VE K E +I+D K E P + +LP NL P+E + K D K + + K GFK+ S+ DKI+ LFK +TA EAAKMA ++F ++ IDL+RIHFKYWT+KF + FD + G W + +F L D I+ + GDWS LA AI + + +L ++ GI+K+++ +L GF + A +I LE Q T L+ ++QK +AK Q K +++ GI F F +G + + D QA ++ LK + E + T+ NEARAA+ R E + +DP +P ++ AY AK +ISD + + P K EL+ + ++++K + P +P ++ N +K K ++ + NV T V N+K++H VT+T APGVF TGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2564 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2565 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2566 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2567 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2568 <Hit_num>34</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2569 <Hit_id>gi|311993473|ref|YP_004010338.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2570 <Hit_def>gp29 baseplate hub subunit [Acinetobacter phage Acj9] &gt;gi|295917430|gb|ADG60101.1| gp29 baseplate hub subunit [Acinetobacter phage Acj9]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2571 <Hit_accession>YP_004010338</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2572 <Hit_len>572</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2573 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2574 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2575 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2576 <Hsp_bit-score>172.17</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2577 <Hsp_score>435</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2578 <Hsp_evalue>5.19477e-43</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2579 <Hsp_query-from>86</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2580 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2581 <Hsp_hit-from>72</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2582 <Hsp_hit-to>572</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2583 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2584 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2585 <Hsp_identity>159</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2586 <Hsp_positive>249</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2587 <Hsp_gaps>58</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2588 <Hsp_align-len>525</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2589 <Hsp_qseq>ESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENN--KKDQKKDDKK-----PTDMLGDLLKTTKG-------GFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSA-EAGEWGGL---------LQSIF-GMLGD---IKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFD-----WVLGRENKIDSTQASDRDQ-ETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2590 <Hsp_hseq>EETKYLSNTADEISAKLSVLSERLKVKYDAASPDAPPVVRDNSTA-EVLADRL-DAQSEEQPKKQAWMPQPM-------------PVEKKPSDDLLSKSEDKGSKEGVKGAPNESTIPMIAAVKGVGSVVKAGFNKSIGIVDKISNLLFKMSVKQIADAALMGAAIFGIILSIDLLKAAWAAWGEKIMAKVEEWTTIFKGWWEGFKGWASSFSDLTTAFEGMRGDFMGIRNAWESGDWPSLAKALGTTIKDGLMTLSGILDRLFTKVLSTILDKVGLGKAAKAVEAEGLQRYQGKTNNKLSDENQKKLAEEQIRR-EKKDGLTPTQRGLTSFLPDKMRKGWAL-TDNEYNQIQAEKKDKAATKNL---SHDDQVKVTAATNEAREAVARFKNIADNYDPNKKDQAAQFDKYKKEAQAYISKPELAKSPAVKAELEAQVAAI-SKGKGGKASVAPEKS--ANSQDSGTVKNIKVAEAQRAANKNASPAGNTV-IQTNVAKTNKNVHVQAPVTSTTAPGVYGATKVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2591 <Hsp_midline>E K L+ A IS KLS L+ L+ K A ST V+ D+L D E P + P+ PV ++P ++ K + K K+ P + ++ KG GF +I I DKIS++LFK +V +A+AA M A +F ++L IDLL+ + W +K M+ +E++ G W G L + F GM GD I+ WE+GDW LA A+ + D + LS I+ +K+ ++ILD +G AA + L+ +Q +T N LS+++QK LA+ Q +R E+ G+ + D W L +N+ + QA +D+ T+NL + + + + NEAR AV R + + DP +K A+ IS ++ PA K EL+ + + SK + K P+ + A S+D+ V+NI+ AE + +K ++ N Q N +K +H VT+T APGV+GAT VN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2592 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2593 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2594 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2595 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2596 <Hit_num>35</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2597 <Hit_id>gi|310722277|ref|YP_003969101.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2598 <Hit_def>unnamed protein product [Aeromonas phage phiAS4] &gt;gi|306021120|gb|ADM79655.1| baseplate hub [Aeromonas phage phiAS4]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2599 <Hit_accession>YP_003969101</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2600 <Hit_len>565</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2601 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2602 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2603 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2604 <Hsp_bit-score>150.984</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2605 <Hsp_score>380</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2606 <Hsp_evalue>5.93083e-36</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2607 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2608 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2609 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2610 <Hsp_hit-to>560</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2611 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2612 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2613 <Hsp_identity>143</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2614 <Hsp_positive>271</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2615 <Hsp_gaps>69</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2616 <Hsp_align-len>560</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2617 <Hsp_qseq>DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2618 <Hsp_hseq>DLLASSELIAETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITATNTSDQTAKKIVEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDKEENVERAIDRIGDRIVSSVDNGFKKTISVADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQNNYHTKANIVKNQNQTIVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2619 <Hsp_midline>D+ +++EL+AE +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P G + I D F + E + D++++ ++ D +GD ++ + GFK TIS+ D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ N +T+ N V N ++TI Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2620 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2621 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2622 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2623 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2624 <Hit_num>36</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2625 <Hit_id>gi|472438116|ref|YP_007677896.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2626 <Hit_def>baseplate hub subunit tail length determinator [Aeromonas phage Aes012] &gt;gi|395653254|gb|AFN69809.1| baseplate hub subunit tail length determinator [Aeromonas phage Aes012]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2627 <Hit_accession>YP_007677896</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2628 <Hit_len>565</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2629 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2630 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2631 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2632 <Hsp_bit-score>150.599</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2633 <Hsp_score>379</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2634 <Hsp_evalue>8.25687e-36</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2635 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2636 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2637 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2638 <Hsp_hit-to>560</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2639 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2640 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2641 <Hsp_identity>143</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2642 <Hsp_positive>271</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2643 <Hsp_gaps>69</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2644 <Hsp_align-len>560</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2645 <Hsp_qseq>DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2646 <Hsp_hseq>DLLASSELIAETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITATNTSDQTAKKIVEEEEQTPKDNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDEEENVERAIDRIGDRIVSSVDNGFKKTISVADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAKGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLRGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2647 <Hsp_midline>D+ +++EL+AE +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P + G + I D F + E + D++++ ++ D +GD ++ + GFK TIS+ D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + KG D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2648 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2649 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2650 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2651 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2652 <Hit_num>37</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2653 <Hit_id>gi|311992947|ref|YP_004009814.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2654 <Hit_def>gp29 baseplate hub subunit [Acinetobacter phage Acj61] &gt;gi|295815236|gb|ADG36162.1| gp29 baseplate hub subunit [Acinetobacter phage Acj61]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2655 <Hit_accession>YP_004009814</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2656 <Hit_len>597</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2657 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2658 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2659 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2660 <Hsp_bit-score>149.443</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2661 <Hsp_score>376</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2662 <Hsp_evalue>2.04985e-35</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2663 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2664 <Hsp_query-to>576</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2665 <Hsp_hit-from>46</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2666 <Hsp_hit-to>597</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2667 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2668 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2669 <Hsp_identity>174</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2670 <Hsp_positive>287</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2671 <Hsp_gaps>61</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2672 <Hsp_align-len>573</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2673 <Hsp_qseq>DVQSANELVAEV---IEEKGNNLIDSVDNVAEG-----TELAAEASERTTESI------KTLTGVASTISDKLSKLASML-ESKVQA-VEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPT------DMLGDLLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSA-------EAGEWGGL---LQSIF-GM---LGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKR-IEEGPGIIDKA-GEFKTRAFDWVLG--RENKIDSTQASDRDQETQNLKAMAPEKREETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPATKKELDKRFQRVESKYQKLKEDNTPKPAAPATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNVNNSKTIHQVQTVTATPAPGVFGATGVN</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2674 <Hsp_hseq>DMKAANDALDDIRDQVSDKADDPIDTLDASKQSLASIDNKMSQQISDNLASSIVQRRYEGTMIGETQNISAKLSLLLGKLTEMHVDAQVEAAQKDNIKSEPTTSEVIGDLIKKEQPEQKPEIAEKILPTEEK----------PSTKLLDENAGKSGKELVGKANPIVMGLDKVGGLLKT---GFKSSIGVMDKISGMLFKFTATQAINAAKVAAAIFAIILAIDLIKIYWSVWGEKIMAKLSEWAEIFKGWWDTFTDWGSQFSDFKTAFEGMGANLMEIKNAWVSGDFPALAKALGNAIIDMGKTISGIIGRTLASLFGPLLRKLGFGETADNLEAAGLRHYQNMTDNRLSPENQRKLAENQVKQEAKDGKTATERGMTDFLPNTWRNKLGFISDNELSQINAEKKDQSARS--NLSQEQKVDSVAATNEAREAIARYKKFADAANPDNAGDMAKVDKYKKEAAQYLSNKALDLTPSIKSELQTQYNAIKVKSKKDDV----KPETSAASKDTQTVNSIKTAEAAK--ANQQTQQTNVANVQNNVVKNSKTVHVQAPTTSTRAPGVHKATGVN</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2675 <Hsp_midline>D+++AN+ + ++ + +K ++ ID++D + +++ + S+ SI T+ G IS KLS L L E V A VE +++ S T VI D + + P + E+ILP + P EN K K+ K D +G LLKT GFK++I + DKIS MLFK+T T AAK+AA +FA++L IDL++I++ W +K M+ E++ +WG ++ F GM L +IK W +GD+ LA A+ + D+ +S I+ ++ + +L LGF A + + L +Q T N LS ++Q+ LA+ Q K+ ++G ++ +F + LG +N++ A +DQ ++ ++ E++ +++ NEAR A+ R +K+ +P+N +M ++K A + +S+ A+ P+ K EL ++ ++ K +K KP A S+D Q V +I+ AE AK + + T NVAN Q N V NSKT+H T+T APGV ATGVN</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2676 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2677 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2678 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2679 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2680 <Hit_num>38</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2681 <Hit_id>gi|401824980|gb|AFQ22670.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2682 <Hit_def>baseplate hub [Stenotrophomonas phage IME13]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2683 <Hit_accession>AFQ22670</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2684 <Hit_len>565</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2685 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2686 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2687 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2688 <Hsp_bit-score>147.902</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2689 <Hsp_score>372</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2690 <Hsp_evalue>5.89358e-35</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2691 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2692 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2693 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2694 <Hsp_hit-to>560</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2695 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2696 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2697 <Hsp_identity>142</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2698 <Hsp_positive>270</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2699 <Hsp_gaps>69</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2700 <Hsp_align-len>560</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2701 <Hsp_qseq>DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2702 <Hsp_hseq>DLLAASELISETVEQ-GNSELRKIVNNTSETENIAAATEISAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITTTNTSDQTAKKIVEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDEEENVERAIDRIGDRIVSSVDNGFKKTISIADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2703 <Hsp_midline>D+ +A+EL++E +E+ GN N +N+A TE++AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P G + I D F + E + D++++ ++ D +GD ++ + GFK TISI D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2704 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2705 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2706 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2707 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2708 <Hit_num>39</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2709 <Hit_id>gi|109290160|ref|YP_656409.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2710 <Hit_def>gp29 base plate hub [Aeromonas phage 25] &gt;gi|104345833|gb|ABF72733.1| gp29 base plate hub [Aeromonas phage 25]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2711 <Hit_accession>YP_656409</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2712 <Hit_len>565</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2713 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2714 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2715 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2716 <Hsp_bit-score>145.976</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2717 <Hsp_score>367</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2718 <Hsp_evalue>2.35249e-34</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2719 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2720 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2721 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2722 <Hsp_hit-to>560</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2723 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2724 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2725 <Hsp_identity>142</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2726 <Hsp_positive>269</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2727 <Hsp_gaps>69</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2728 <Hsp_align-len>560</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2729 <Hsp_qseq>DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2730 <Hsp_hseq>DLLAASELISETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITATNTSDQTAKKIVEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDKEENVESAIDRIGDRIVSSVDNGFKKTINIADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2731 <Hsp_midline>D+ +A+EL++E +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T ++E++ P G + I D F + E + D++++ + D +GD ++ + GFK TI+I D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2732 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2733 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2734 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2735 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2736 <Hit_num>40</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2737 <Hit_id>gi|423262258|ref|YP_007010857.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2738 <Hit_def>baseplate hub subunit tail length determinator [Aeromonas phage Aes508] &gt;gi|402762136|gb|AFQ97250.1| baseplate hub subunit tail length determinator [Aeromonas phage Aes508]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2739 <Hit_accession>YP_007010857</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2740 <Hit_len>565</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2741 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2742 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2743 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2744 <Hsp_bit-score>145.591</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2745 <Hsp_score>366</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2746 <Hsp_evalue>3.57946e-34</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2747 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2748 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2749 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2750 <Hsp_hit-to>560</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2751 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2752 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2753 <Hsp_identity>142</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2754 <Hsp_positive>269</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2755 <Hsp_gaps>69</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2756 <Hsp_align-len>560</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2757 <Hsp_qseq>DVQSANELVAEVIEEKGN-------NLIDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQK--VQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKK----DQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKREETL-IKQNEARAAVQRLE------KYIGDVDPENPTNMQSLEKAY-------NSAKKSISDSAISDQPA--TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKEQSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2758 <Hsp_hseq>DLLASSELIAETVEQ-GNSELRKIVNNTSETENIAAATELSAEATEISNQHLKEISDTSKKTFSKLSEFAEKLKNNFLADVEKNPITTTNTSDQTAKKISEEEEQTPKNNPVLGYLKTISE---------DIKFLKNDKPKEEEKEDKVKPDKEENVERAIDRIGDRIVSSVDNGFKKTISVADSISSMLFKYTLTAVLNFAKMAALVLSLIMTFDVLSRHFTHWTKMFEENYAEFKNQLGSLATPFENVHGVITDLMNYFKSDEYTKMFVRLAEGAFDQMKYMVNMMMVGLAKLGATILRALGADEKADSLEASAISVAASEVGYTPSKEEEEVIGRVRKREAEDANN---------TEA-NWFEKQWRKVNG-----EDEETPDEK----EKREKRMEIAKNTTAEQFGRYDVLSGKINHVGVTAKKNETSPELLNKHRELLDDRSNEVEQSYQEGKLTKESYEQLRVEIDK-----QTKFLAEHEKTLVVPTAAIKPAPEPEVSTVKSIDKEEKRVESKKQEAASQTNYHTKANIVKNQNQTIVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2759 <Hsp_midline>D+ +++EL+AE +E+ GN N +N+A TEL+AEA+E + + +K ++ + KLS+ A L++ A +K + + S T + E++ P G + I D F + E + D++++ ++ D +GD ++ + GFK TIS+ D ISSMLFKYT+TA+ AKMAA++ +L++ D+L HF +WT F N+ EF + G +++ G++ D+ ++++ +++ + V + +G D + + +M +G++K+ A+IL ALG + A ++ SA+ G + S+++++ + + + + E+ T A +W + K++ D+ET + K EKRE+ + I +N R + ++G +N T+ + L K N ++S + ++ + + E+DK ++K+ E P A PA + V++I K E E K+ +T+ N V N ++TI Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2760 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2761 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2762 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2763 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2764 <Hit_num>41</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2765 <Hit_id>gi|66391985|ref|YP_238910.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2766 <Hit_def>baseplate hub subunit [Aeromonas phage 31] &gt;gi|62114822|gb|AAX63670.1| gp29 [Aeromonas phage 31]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2767 <Hit_accession>YP_238910</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2768 <Hit_len>566</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2769 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2770 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2771 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2772 <Hsp_bit-score>144.05</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2773 <Hsp_score>362</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2774 <Hsp_evalue>1.01075e-33</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2775 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2776 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2777 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2778 <Hsp_hit-to>562</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2779 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2780 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2781 <Hsp_identity>150</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2782 <Hsp_positive>269</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2783 <Hsp_gaps>53</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2784 <Hsp_align-len>553</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2785 <Hsp_qseq>DVQSANELVAEVIEEKGNNL------IDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQA--VEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKR---EETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPA---------TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKE--QSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2786 <Hsp_hseq>DSLAAQELIAETVEQGNNELRQIKANTASLHDTAAATELSAESTEMSNTILREISETGKQTFSKLSEFAERLKGSFSADDVEQAPIRTASSSDQAIQIINEENPEPENPLVG-----YLRTISEDIKFLRENKNEPSDPKDPDVVPDDKDDLKTMIDRIGDQIVKSVDSGFKRTVNIADSISSTLFKYTITAALNFAKMAALVLSLIIAFDVLSRHFSHWTQMFQEQYAEFKETLGSFGTPFENLTGIVTDLVNYFKSDEYLKMFVRLAEGAADQMIYIVNMMMVGLAKLGAAILRALGADDKADTLEASAISVATKTVGYTPSEEEEATIGRVRKRQAQE---------EAEQSEASWWEKKKREWDG-----KPIETDEEKAVRERKKSIAENTTAEQFGKHDALSQKIQHVGVTAEKNETSNELLGKHRELLEKRASDVEQAKQSGEITTESYKQLKVEIEKQREFLDAHEQKL-----LKPKASIKPAPEPEIGVVGSIAKEEKRVEASQTAKQEAASNY-NTNANIVKNNNQTLVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2787 <Hsp_midline>D +A EL+AE +E+ N L S+ + A TEL+AE++E + ++ ++ KLS+ A L+ A VEQ + +S+ + +I ++ P+P+ P L + ++ E+ P + + D K D K D +GD ++K+ GFK T++I D ISS LFKYT+TA AKMAA++ +L++ D+L HF +WT F + EF G +G +++ G++ D+ ++++ ++ + V + +G AD + + +M +G++K+ A+IL ALG ++ A T+ SA+ + G + SE+++ + + + ++ +E E + W ++ + D + ET KA+ K+ E T +Q A+ + +++G +N T+ + L K +K SD + Q K E++K+ + +++ QKL KP A PA + V +I K E E Q+ K N NT N V NN++T+ Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2788 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2789 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2790 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2791 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2792 <Hit_num>42</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2793 <Hit_id>gi|37651664|ref|NP_932538.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2794 <Hit_def>baseplate hub subunit [Aeromonas phage 44RR2.8t] &gt;gi|34732964|gb|AAQ81501.1| baseplate hub subunit [Aeromonas phage 44RR2.8t]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2795 <Hit_accession>NP_932538</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2796 <Hit_len>566</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2797 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2798 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2799 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2800 <Hsp_bit-score>144.05</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2801 <Hsp_score>362</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2802 <Hsp_evalue>1.1527e-33</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2803 <Hsp_query-from>44</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2804 <Hsp_query-to>569</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2805 <Hsp_hit-from>36</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2806 <Hsp_hit-to>562</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2807 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2808 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2809 <Hsp_identity>150</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2810 <Hsp_positive>268</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2811 <Hsp_gaps>53</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2812 <Hsp_align-len>553</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2813 <Hsp_qseq>DVQSANELVAEVIEEKGNNL------IDSVDNVAEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQA--VEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKKPTDMLGD-LLKTTKGGFKATISITDKISSMLFKYTVTALAEAAKMAAMLFALVLGIDLLRIHFKYWTDKFMSNFDEFSAEAGEWGGLLQSIFGMLGDIKKFWEAGDWSGLAVAIVKGLADVIYNLSEIMSLGISKISASILDALGFENAATTIRGSALEGFQERTGNSLSEDDQKALAKYQSKRIEEGPGIIDKAGEFKTRAFDWVLGRENKIDSTQASDRDQETQNLKAMAPEKR---EETLIKQNEARAAVQRLEKYIGDVDPENPTNMQSLEKAYNSAKKSISDSAISDQPA---------TKKELDKRFQRVESKYQKLKEDNTPKPAA---PATSEDNQRVQNIQKAENAKE--QSKKSTGDMNVANTQVNNV-NNSKTIHQVQTVTATPAPGV</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2814 <Hsp_hseq>DSLAAQELIAETVEQGNNELRQIKANTASLHDTAAATELGAESTEMSNTILREISETGKQTFSKLSEFAERLKGSFSADDVEQTPIRAASSSDQAIQIINEENPEPENPLVG-----YLRTISEDIKFLRENKNEPSDPKDPDVVPDDKDDLKTMIDRIGDQIVKSVDSGFKRTVNIADSISSTLFKYTITAALNFAKMAALVLSLIIAFDVLSRHFSHWTQMFQEQYAEFKETLGSFGTPFENLTGIVTDLVNYFKSDEYLKMFVRLAEGAADQMIYIVNMMMVGLAKLGAAILRALGADDKADTLEASAISVATKTVGYTPSEEEEATIGRVRKRQAQE---------EAEQSEASWWEKKKREWDG-----KPIETDEEKAVRERKKSIAENTTAEQFGKHDALSQKIQHVGVTAEKNETSNELLGKHRELLEKRASDVEQAKQSGEITTESYKQLKVEIEKQREFLDAHEQKL-----LKPKASIKPAPEPEIGVVGSIAKEEKRVEASQTAKQEAASNY-NTNANIVKNNNQTLVQAPR-TSSPGPGI</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2815 <Hsp_midline>D +A EL+AE +E+ N L S+ + A TEL AE++E + ++ ++ KLS+ A L+ A VEQ + +S+ + +I ++ P+P+ P L + ++ E+ P + + D K D K D +GD ++K+ GFK T++I D ISS LFKYT+TA AKMAA++ +L++ D+L HF +WT F + EF G +G +++ G++ D+ ++++ ++ + V + +G AD + + +M +G++K+ A+IL ALG ++ A T+ SA+ + G + SE+++ + + + ++ +E E + W ++ + D + ET KA+ K+ E T +Q A+ + +++G +N T+ + L K +K SD + Q K E++K+ + +++ QKL KP A PA + V +I K E E Q+ K N NT N V NN++T+ Q T++P PG+</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2816 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2817 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2818 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2819 <Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2820 <Hit_num>43</Hit_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2821 <Hit_id>gi|398313739|emb|CCI89086.1|</Hit_id>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2822 <Hit_def>phage baseplate hub [Yersinia phage phiD1]</Hit_def>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2823 <Hit_accession>CCI89086</Hit_accession>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2824 <Hit_len>191</Hit_len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2825 <Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2826 <Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2827 <Hsp_num>1</Hsp_num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2828 <Hsp_bit-score>79.7221</Hsp_bit-score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2829 <Hsp_score>195</Hsp_score>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2830 <Hsp_evalue>1.49556e-13</Hsp_evalue>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2831 <Hsp_query-from>2</Hsp_query-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2832 <Hsp_query-to>189</Hsp_query-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2833 <Hsp_hit-from>3</Hsp_hit-from>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2834 <Hsp_hit-to>187</Hsp_hit-to>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2835 <Hsp_query-frame>0</Hsp_query-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2836 <Hsp_hit-frame>0</Hsp_hit-frame>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2837 <Hsp_identity>69</Hsp_identity>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2838 <Hsp_positive>102</Hsp_positive>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2839 <Hsp_gaps>17</Hsp_gaps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2840 <Hsp_align-len>195</Hsp_align-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2841 <Hsp_qseq>KSENMSTMRRRKVIADSKGERDAASTASDQVDSLELIGLKLDDVQSANELVAEVIEEKGNNLIDSVDNV-------AEGTELAAEASERTTESIKTLTGVASTISDKLSKLASMLESKVQAVEQKVQESGASASTGLSVIEDKLPDPDEPESPGLPERILPPLDDNNNLPDEDFFPPVPQEPENNKKDQKKDDKK</Hsp_qseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2842 <Hsp_hseq>KPQEMQTMRR-KVISDNKPTQEAAKSASNTLSGLNDISTKLDDTQAASELIAQTVEEKSNEIVGAIGNVESAVSDTTAGSELIAETVEIGNNINKE---IGESLGSKLDKLTSLLEQKIQTA--GIQQTGTXLATVESAIPVKVVEDDTDRXXVLXYRXLKQLIMILTLI---FSLPLSQLSQ-SKNHQKKNRKK</Hsp_hseq>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2843 <Hsp_midline>K + M TMRR KVI+D+K ++AA +AS+ + L I KLDD Q+A+EL+A+ +EEK N ++ ++ NV G+EL AE E K + ++ KL KL S+LE K+Q +Q++G +T S I K+ + D L R L L L F P+ Q + +K QKK+ KK</Hsp_midline>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2844 </Hsp>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2845 </Hit_hsps>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2846 </Hit>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2847 </Iteration_hits>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2848 <Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2849 <Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2850 <Statistics_db-num>48094830</Statistics_db-num>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2851 <Statistics_db-len>17186091396</Statistics_db-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2852 <Statistics_hsp-len>153</Statistics_hsp-len>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2853 <Statistics_eff-space>4157067357738</Statistics_eff-space>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2854 <Statistics_kappa>0.041</Statistics_kappa>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2855 <Statistics_lambda>0.267</Statistics_lambda>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2856 <Statistics_entropy>0.14</Statistics_entropy>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2857 </Statistics>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2858 </Iteration_stat>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2859 </Iteration>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2860 </BlastOutput_iterations>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2861 </BlastOutput>
7342f467507b Uploaded v0.4 of JBrowse
iuc
parents:
diff changeset
2862