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comparison readme.rst @ 25:1cfc579079a6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit b6f9a87b6091cc881a49e0b6acfadc5e7786967f
author iuc
date Tue, 29 Jan 2019 05:34:16 -0500
parents 836d1aa3e89a
children 08776ba76cf5
comparison
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24:fa30df9b79c2 25:1cfc579079a6
23 likely to change at any time! Beware. ;) 23 likely to change at any time! Beware. ;)
24 24
25 History 25 History
26 ======= 26 =======
27 27
28 - 0.7 Support for plugins (currently GC Content, Bookmarks, ComboTrackSelector), 28 - 1.16.1+galaxy0
29 track metadata 29
30 - 0.5.2 Support for CanvasFeatures options. 30 - UPDATED to JBrowse 1.16.1
31 - 0.5.1 Support for contextual menus. Conda tests. 31 - ADDED support for MultiBigWig plugin
32 - 0.5 Update existing instances on disk. Index names. Support HTML tracks 32 - ADDED support for tabix indexing of fasta and gff
33 instead of Canvas. Support default tracks. General JBrowse optinos 33 - ADDED support for REST and SPARQL endpoints
34 - 0.4 Support for dataset collections and customisation of tracks including 34 - ADDED option to change chunk size for BAM tracks
35 labelling, colours, styling. Added support for genetic code selection. 35 - FIXED loading of VCF files. They were gzipped and the URLs were incorrect
36 Fixed package installation recipe issues. 36 - FIXED metadata on tracks types other than GFF+HTML
37 - 0.3 Added support for BigWig, etc. 37 - FIXED infrastructure URL parsing (and embedding in links) for some tracks
38 - 0.2 Added support for BAM, Blast, VCF. 38 - REMOVED support for selecting multiple genomes as input due to tracking of track metadata
39 - 0.1 Initial public release. 39 - REMOVED support for themes as JBrowse no longer allow runtime loading of plugins
40
41 - 0.7 Support for plugins (currently GC Content, Bookmarks, ComboTrackSelector),
42 track metadata
43 - 0.5.2 Support for CanvasFeatures options.
44 - 0.5.1 Support for contextual menus. Conda tests.
45 - 0.5 Update existing instances on disk. Index names. Support HTML tracks
46 instead of Canvas. Support default tracks. General JBrowse optinos
47 - 0.4 Support for dataset collections and customisation of tracks including
48 labelling, colours, styling. Added support for genetic code selection.
49 Fixed package installation recipe issues.
50 - 0.3 Added support for BigWig, etc.
51 - 0.2 Added support for BAM, Blast, VCF.
52 - 0.1 Initial public release.
40 53
41 Wrapper License (MIT/BSD Style) 54 Wrapper License (MIT/BSD Style)
42 =============================== 55 ===============================
43 56
44 Permission to use, copy, modify, and distribute this software and its 57 Permission to use, copy, modify, and distribute this software and its