comparison test-data/custom_config/test.xml @ 34:9de82b4963e6 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 0a26506563ff9b7fa683d3d0eaa16436c3560908"
author iuc
date Wed, 11 Sep 2019 09:40:36 -0400
parents 2bb2e07a7a21
children
comparison
equal deleted inserted replaced
33:0ae74c70b267 34:9de82b4963e6
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <root> 2 <root>
3 <metadata> 3 <metadata>
4 <gencode>11</gencode> 4 <gencode>11</gencode>
5 <genomes> 5 <genomes>
6 <genome path="/tmp/tmpWtvfKr/files/000/dataset_17.dat"> 6 <genome path="/tmp/tmpqkd9zdgq/files/1/a/7/dataset_1a77d084-9f64-48b9-802b-787e0e86c7b1.dat">
7 <metadata> 7 <metadata>
8 <dataset id="27ee89e2e3d631e0" hid="1" 8 <dataset id="a1e670e1ea0da54b" hid="1"
9 size="171.6 KB" 9 size="171.6 KB"
10 edam_format="format_1929" 10 edam_format="format_1929"
11 file_ext="fasta" /> 11 file_ext="fasta" />
12 <history id="7b55dbb89df8f4e5" 12 <history id="683bc220e21425bb"
13 user_email="test@bx.psu.edu" 13 user_email="test@bx.psu.edu"
14 user_id="2" 14 user_id="2"
15 display_name="test_history"/> 15 display_name="test_history"/>
16 <metadata 16 <metadata
17 dbkey="?" 17 dbkey="?"
40 <galaxyUrl>http://localhost</galaxyUrl> 40 <galaxyUrl>http://localhost</galaxyUrl>
41 </metadata> 41 </metadata>
42 <tracks> 42 <tracks>
43 <track cat="With custom track config" format="gene_calls" visibility="default_off"> 43 <track cat="With custom track config" format="gene_calls" visibility="default_off">
44 <files> 44 <files>
45 <trackFile path="/tmp/tmpWtvfKr/files/000/dataset_18.dat" ext="gff3" label="1.gff"> 45 <trackFile path="/tmp/tmpqkd9zdgq/files/a/4/a/dataset_a4a9adc4-f3d3-4c05-8074-69e01ace1c78.dat" ext="gff3" label="1.gff">
46 <metadata> 46 <metadata>
47 <dataset id="61f03d5eef6f1538" hid="2" 47 <dataset id="9a22496ee796fbfc" hid="2"
48 size="2.3 KB" 48 size="2.3 KB"
49 edam_format="format_1975" 49 edam_format="format_1975"
50 file_ext="gff3" /> 50 file_ext="gff3" />
51 <history id="7b55dbb89df8f4e5" 51 <history id="683bc220e21425bb"
52 user_email="test@bx.psu.edu" 52 user_email="test@bx.psu.edu"
53 user_id="2" 53 user_id="2"
54 display_name="test_history"/> 54 display_name="test_history"/>
55 <metadata 55 <metadata
56 dbkey="?" 56 dbkey="?"
70 70
71 <options> 71 <options>
72 <style> 72 <style>
73 <overridePlugins>False</overridePlugins> 73 <overridePlugins>False</overridePlugins>
74 <overrideDraggable>False</overrideDraggable> 74 <overrideDraggable>False</overrideDraggable>
75 <className>feature2</className> 75 <className>feature</className>
76 <description>note,description</description> 76 <description>note,description</description>
77 <label>product,name,id</label> 77 <label>product,name,id</label>
78 <height>10px</height> 78 <height>10px</height>
79 <maxHeight>600</maxHeight> 79 <maxHeight>600</maxHeight>
80 </style> 80 </style>
101 </style.strandArrow> 101 </style.strandArrow>
102 </custom_config> 102 </custom_config>
103 103
104 <gff> 104 <gff>
105 <trackType>NeatHTMLFeatures/View/Track/NeatFeatures</trackType> 105 <trackType>NeatHTMLFeatures/View/Track/NeatFeatures</trackType>
106 <topLevelFeatures>mRNA</topLevelFeatures>
107 <index>false</index> 106 <index>false</index>
108 </gff> 107 </gff>
109 </options> 108 </options>
110 </track> 109 </track>
111 </tracks> 110 </tracks>