Mercurial > repos > iuc > jbrowse

diff test-data/menus/test.xml @ 25:1cfc579079a6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit b6f9a87b6091cc881a49e0b6acfadc5e7786967f
author iuc
date Tue, 29 Jan 2019 05:34:16 -0500
parents ff11d442feed
children 2bb2e07a7a21
line wrap: on
line diff
--- a/test-data/menus/test.xml	Wed Jan 16 03:28:29 2019 -0500
+++ b/test-data/menus/test.xml	Tue Jan 29 05:34:16 2019 -0500
@@ -3,27 +3,27 @@
     <metadata>
         <gencode>11</gencode>
         <genomes>
-                  <genome path="/tmp/tmpnh6QWY/files/000/dataset_14.dat">
-                    <metadata>
-                      <dataset id="1ae74d26531588b0" hid="1"
-                          size="171.6 KB"
-                          edam_format="format_1929"
-                          file_ext="fasta" />
-                      <history id="8155e4b4bf1581ff"
-                          user_email="test@bx.psu.edu"
-                          user_id="2"
-                          display_name="test_history"/>
-                      <metadata
-                          dbkey="hg17"
-                          data_lines="2881"
-                          sequences="1"
-                          />
-                      <tool
-                          tool_id="upload1"
-                          tool_version="1.1.4"
-                          />
-                    </metadata>
-                  </genome>
+              <genome path="/tmp/tmpWtvfKr/files/000/dataset_14.dat">
+                <metadata>
+                  <dataset id="1ae74d26531588b0" hid="1"
+                      size="171.6 KB"
+                      edam_format="format_1929"
+                      file_ext="fasta" />
+                  <history id="8155e4b4bf1581ff"
+                      user_email="test@bx.psu.edu"
+                      user_id="2"
+                      display_name="test_history"/>
+                  <metadata
+                      dbkey="?"
+                      data_lines="2881"
+                      sequences="1"
+                      />
+                  <tool
+                      tool_id="upload1"
+                      tool_version="1.1.6"
+                      />
+                </metadata>
+              </genome>
         </genomes>
         <general>
             <defaultLocation></defaultLocation>
@@ -37,12 +37,12 @@
             <show_menu>true</show_menu>
             <hideGenomeOptions>false</hideGenomeOptions>
         </general>
-        <galaxyUrl>http://localhost:8080</galaxyUrl>
+        <galaxyUrl>http://localhost</galaxyUrl>
     </metadata>
     <tracks>
         <track cat="With menu or index" format="gene_calls" visibility="default_off">
             <files>
-              <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff">
+              <trackFile path="/tmp/tmpWtvfKr/files/000/dataset_15.dat" ext="gff3" label="1.gff">
                 <metadata>
                   <dataset id="440a6c2b5d9efe20" hid="2"
                       size="2.3 KB"
@@ -53,7 +53,7 @@
                       user_id="2"
                       display_name="test_history"/>
                   <metadata
-                      dbkey="hg17"
+                      dbkey="?"
                       data_lines="27"
                       comment_lines="19"
                       columns="9"
@@ -63,7 +63,7 @@
                       />
                   <tool
                       tool_id="upload1"
-                      tool_version="1.1.4"
+                      tool_version="1.1.6"
                       />
                 </metadata>
               </trackFile>
@@ -110,7 +110,7 @@
         </track>
         <track cat="With menu or index" format="gene_calls" visibility="default_off">
             <files>
-              <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff">
+              <trackFile path="/tmp/tmpWtvfKr/files/000/dataset_15.dat" ext="gff3" label="1.gff">
                 <metadata>
                   <dataset id="440a6c2b5d9efe20" hid="2"
                       size="2.3 KB"
@@ -121,7 +121,7 @@
                       user_id="2"
                       display_name="test_history"/>
                   <metadata
-                      dbkey="hg17"
+                      dbkey="?"
                       data_lines="27"
                       comment_lines="19"
                       columns="9"
@@ -131,7 +131,7 @@
                       />
                   <tool
                       tool_id="upload1"
-                      tool_version="1.1.4"
+                      tool_version="1.1.6"
                       />
                 </metadata>
               </trackFile>
@@ -169,4 +169,4 @@
         GCContent=""
         theme=""
         />
-</root>
+</root>
\ No newline at end of file