Mercurial > repos > iuc > jbrowse

diff test.yml @ 1:497c6bb3b717 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 0887009a23d176b21536c9fd8a18c4fecc417d4f
author: iuc
date: Thu, 18 Jun 2015 12:10:51 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test.yml	Thu Jun 18 12:10:51 2015 -0400
@@ -0,0 +1,54 @@
+---
+  -
+    file: test-data/154.bam
+    ext: bam
+    label: Sequencing Data
+    category: "Sequencing Data"
+    options:
+        __unused__: "Not used...just to ensure options has at least one key"
+        auto_snp: true
+        bam_index: test-data/154.bam.bai
+  -
+    file: test-data/merlin.gff
+    ext: gff3
+    label: "Gene Calls"
+    category: "Default"
+    options:
+        __unused__: "Not used...just to ensure options has at least one key"
+        match: false
+  -
+    file: test-data/154.bw
+    ext: bigwig
+    label: "Bigwig Test"
+    category: "Sequencing Data"
+    options:
+        __unused__: "Not used...just to ensure options has at least one key"
+        type: JBrowse/View/Track/Wiggle/XYPlot
+        variance_band: true
+        autoscale: local
+  -
+    file: test-data/test.vcf
+    ext: vcf
+    label: "Variant Test"
+    category: "Sequencing Data"
+    options:
+        __unused__: "Not used...just to ensure options has at least one key"
+  -
+    file: test-data/blast.xml
+    ext: blastxml
+    label: "BlastP Hits"
+    category: "Comparative Genomics"
+    options:
+        __unused__: "Not used...just to ensure options has at least one key"
+        parent: test-data/merlin.gff
+        protein: true
+        min_gap: 10
+        match: true
+  -
+    file: test-data/xmfa.gff
+    ext: gff3
+    label: "Progressive Mauve comparison"
+    category: "Comparative Genomics"
+    options:
+        __unused__: "Not used...just to ensure options has at least one key"
+        match: true