Mercurial > repos > iuc > jcvi_gff_stats
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jcvi_gff_stats commit 69b89d1e8d108e91c81099e5f922357183dc2490
| author | iuc |
|---|---|
| date | Thu, 02 Aug 2018 12:31:05 -0400 |
| parents | 2defe48e4c7a |
| children |
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================================================================== o all ------------------------------------------------------------------ Max number of transcripts per gene 1 Mean exon size 151.1 Mean gene locus size (first to last exon) 3294.0 Mean number of distinct exons per gene 8.0 Mean number of transcripts per gene 1.0 Mean transcript size (UTR, CDS) 1208.5 Number of distinct exons 16 Number of genes 2 Number of genes with alternative transcript variants 0 (0.0%) Number of multi-exon genes 2 (100.0%) Number of predicted transcripts 2 Number of single-exon genes 0 (0.0%) ------------------------------------------------------------------ ===================================================================================================== o % GC % of genome Average size (bp) Median size (bp) Number Total length (Mb) ----------------------------------------------------------------------------------------------------- Exon 50% 20% 151 133 16 0Mb Gene 43% 56% 3,294 3,294 2 0Mb Intron 39% 35% 297 250 14 0Mb ----------------------------------------------------------------------------------------------------- Exon_Length: Min=71 Max=410 N=15 Mean=153.2 SD=92.1160138087 Median=138.0 Sum=2298 Intron_Length: Min=83 Max=732 N=13 Mean=319.076923077 SD=211.891649212 Median=271.0 Sum=4148 Gene_Length: Min=579 Max=1719 N=2 Mean=1149.0 SD=570.0 Median=1149.0 Sum=2298 Exon_Count: Min=6 Max=9 N=2 Mean=7.5 SD=1.5 Median=7.5 Sum=15