diff kc-align.xml @ 3:0243407479f1 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/kc-align commit 6c793b7cf264021bc72b96fbd9b6ceeefcb967bd"
author iuc
date Tue, 31 Mar 2020 09:16:14 -0400
parents 20bef04b5272
children a0ffbc759ad8
line wrap: on
line diff
--- a/kc-align.xml	Mon Mar 30 10:01:40 2020 -0400
+++ b/kc-align.xml	Tue Mar 31 09:16:14 2020 -0400
@@ -1,4 +1,4 @@
-<tool id="kc-align" name="Kc-Align" version="0.1.3" python_template_version="3.5">
+<tool id="kc-align" name="Kc-Align" version="0.1.4" python_template_version="3.5">
     <requirements>
         <requirement type="package" version="0.5.9">kcalign</requirement>
         <requirement type="package" version="3.2.2">kalign3</requirement>
@@ -18,7 +18,6 @@
     <inputs>
         <param name="reference" type="data" format="fasta" label="Reference Sequence" help="Single FASTA reference sequence to be aligned" />
         <param name="reads" type="data" format="fasta" label="Reads" help="Multi-FASTA of seqeunces to be aligned with the reference" />
-        <param name="outname" type="text" value="out" label="Output Prefix" />
         <conditional name="position" >
             <param name="mode" type="select" label="Mode" >
                 <option value="genome">Genome</option>
@@ -37,8 +36,8 @@
         <param name="compress" type="boolean" truevalue="--compress" falsevalue="" label="Compress" help="Compress identical sequences" />
     </inputs>
     <outputs>
-        <data name="fasta" format="fasta" from_work_dir="codon_align.fasta" label="${outname}.fasta" />
-        <data name="clustal" format="txt" from_work_dir="codon_align.clustal" label="${outname}.clustal" />
+        <data name="fasta" format="fasta" from_work_dir="codon_align.fasta" label="${tool.name}: fasta output" />
+        <data name="clustal" format="txt" from_work_dir="codon_align.clustal" label="${tool.name}: clustal output" />
     </outputs>
 <tests>
     <test>