Mercurial > repos > iuc > khmer_extract_partitions
diff extract-partitions.xml @ 6:2c763fb18010 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 7de685f4763d988a5a9abce4a9c2b4714daaf165"
| author | iuc |
|---|---|
| date | Wed, 18 Dec 2019 16:00:12 -0500 |
| parents | d5a18dd63529 |
| children | 98b53d46e851 |
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--- a/extract-partitions.xml Fri Sep 07 10:59:19 2018 -0400 +++ b/extract-partitions.xml Wed Dec 18 16:00:12 2019 -0500 @@ -1,4 +1,4 @@ -<tool id="khmer_extract_partitions" name="Extract partitions" version="@WRAPPER_VERSION@.0"> +<tool id="khmer_extract_partitions" name="khmer: Extract partitions" version="@WRAPPER_VERSION@@TOOL_VERSION@"> <description>Separate sequences that are annotated with partitions into grouped files</description> <macros> <token name="@BINARY@">extract-partitions.py</token> @@ -22,15 +22,15 @@ </command> <inputs> <expand macro="input_sequences_filenames" /> - <param name="max_size" type="integer" label="Max group size" value="1000000" - help="No more than this many number of sequences will be stored in each output (--max-size/-X)"/> + <param argument="--max-size" name="max_size" type="integer" label="Max group size" value="1000000" + help="No more than this many number of sequences will be stored in each output"/> <param name="min_partition_size" type="integer" label="Min partition size" value="5" help="The minimum partition size worth keeping (--min-partition-size/-m)" /> <param name="output_unassigned" type="boolean" checked="false" truevalue="--output-unassigned" falsevalue="" label="Output unassigned sequences" help="(--output-unassigned/-U)" /> </inputs> <outputs> - <data name="distribution" format="txt" from_work_dir="output.dist" label="Partition size distribution from ${tool.name}" /> + <data name="distribution" format="txt" from_work_dir="output.dist" label="${tool.name} on ${on_string}: Partition size distribution" /> <collection name="groups-of-partitions" type="list"> <discover_datasets pattern="__name__" directory="output" /> </collection>