# HG changeset patch
# User iuc
# Date 1616535056 0
# Node ID 98b53d46e8512d505e769bb0ed4d9e9029f45154
# Parent  2c763fb1801000e207b4b0828ef75fefd79795cc
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 14ea2dc5ef36219c908ed64b256794711ce7b902"

diff -r 2c763fb18010 -r 98b53d46e851 extract-partitions.xml
--- a/extract-partitions.xml	Wed Dec 18 16:00:12 2019 -0500
+++ b/extract-partitions.xml	Tue Mar 23 21:30:56 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="khmer_extract_partitions" name="khmer: Extract partitions" version="@WRAPPER_VERSION@@TOOL_VERSION@">
+<tool id="khmer_extract_partitions" name="khmer: Extract partitions" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>Separate sequences that are annotated with partitions into grouped files</description>
     <macros>
         <token name="@BINARY@">extract-partitions.py</token>
diff -r 2c763fb18010 -r 98b53d46e851 macros.xml
--- a/macros.xml	Wed Dec 18 16:00:12 2019 -0500
+++ b/macros.xml	Tue Mar 23 21:30:56 2021 +0000
@@ -1,9 +1,10 @@
 <macros>
-    <token name="@WRAPPER_VERSION@">3.0.0a3</token>
-    <token name="@TOOL_VERSION@">+galaxy1</token>
+    <token name="@TOOL_VERSION@">3.0.0a3</token>
+    <token name="@VERSION_SUFFIX@">2</token>
+    <token name="@PROFILE@">20.01</token>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="@WRAPPER_VERSION@">khmer</requirement>
+            <requirement type="package" version="@TOOL_VERSION@">khmer</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -75,7 +76,7 @@
             help="Put in order of precedence such as longest reads first." />
     </xml>
     <xml name="input_sequence_filename">
-        <param  name="input_sequence_filename" type="data" format="fasta,fastq"
+        <param  name="input_sequence_filename" type="data" format="fasta,fastq,fasta.gz,fastq.gz"
             label="Sequence in FASTA or FASTQ format" />
     </xml>
     <xml name="input_countgraph_filename">
diff -r 2c763fb18010 -r 98b53d46e851 test-data/test-abund-read-2.fq.gz
Binary file test-data/test-abund-read-2.fq.gz has changed