Mercurial > repos > iuc > khmer_partition
diff do-partition.xml @ 9:8388fe31d604 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 238d0992c63de53623c4fc05eec8bd8d67001997
author | iuc |
---|---|
date | Thu, 03 Oct 2024 13:46:07 +0000 |
parents | 5a0fa29951ae |
children |
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--- a/do-partition.xml Mon Jun 17 11:46:46 2024 +0000 +++ b/do-partition.xml Thu Oct 03 13:46:07 2024 +0000 @@ -1,10 +1,10 @@ <tool id="khmer_partition" name="khmer: Sequence partition all-in-one" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>Load, partition, and annotate sequences</description> - <expand macro="bio_tools"/> <macros> <token name="@BINARY@">do-partition.py</token> <import>macros.xml</import> </macros> + <expand macro="bio_tools"/> <expand macro="requirements" /> <expand macro="stdio" /> <expand macro="version" /> @@ -24,12 +24,17 @@ <expand macro="tableinputs" /> </inputs> <outputs> - <data name="information" format="txt" from_work_dir="output.info" label="${tool.name} on ${on_string}: summary." /> + <data name="information" format="txt" from_work_dir="output/output.info" label="${tool.name} on ${on_string}: summary" /> <expand macro="output_sequences" extension="part"/> </outputs> <tests> <test> <param name="inputs" value="random-20-a.fa"/> + <output name="information"> + <assert_contents> + <has_text text="1 subsets total"/> + </assert_contents> + </output> <output_collection name="sequences" type="list"> <element name="random-20-a.fa" file="random-20-a.fa.part" /> </output_collection>