Mercurial > repos > iuc > kma

diff test-data/ERR884056.aln @ 0:2595c27071c2 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/kma commit 43bbde4f8f8671284b2acb21dfd2657de4ba967f"
author iuc
date Sat, 15 Feb 2020 15:32:58 -0500
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/ERR884056.aln	Sat Feb 15 15:32:58 2020 -0500
@@ -0,0 +1,170 @@
+# b0842_1
+template: 	ATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTC
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	TGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	TTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACTTCGATGACCGCG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	TATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGT
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	CGCCGTCCGGTGATGCTGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	CTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGT
+          	______________________________________________||||||||||||||
+query:    	----------------------------------------------gcataagcctctgt
+
+template: 	TTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATC
+          	||||||||||||||||||||||||||||||||||||||||||||_|||||||||||||||
+query:    	ttcattggcgctgtgggatacgccgcaattcaggaatccttcgatgaggcggtttgtatc
+
+template: 	AAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTG
+          	||||||||____________________________________________________
+query:    	aagatcac----------------------------------------------------
+
+template: 	GGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	GCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGC
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	GAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGC
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	TTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCC
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	CAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	CAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGACCTCG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	CGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTG
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	GTCGCTGCTGCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTA
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	AGTATTTATGCTTTCGGTATTGGTCTGGCGAATGCGGGACTGGTGCGATTAACCCTGTTT
+          	____________________________________________________________
+query:    	------------------------------------------------------------
+
+template: 	GCCAGCGATATGAGTAAAGGTACGGTTTCTGCCGCGATGGGAATGCTGCAAATGCTGATC
+          	__________________________||||||_|||||||||||||||||||||||||||
+query:    	--------------------------ttctgCgGcGATGGGAATGCTGCAAATGCTGATC
+
+template: 	TTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAACGGACTGTTT
+          	|||||||||||||||||||||||||||||||||||||||||||||||||||||||_||||
+query:    	TTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAACGGACAGTTT
+
+template: 	AATCTCTTCAACCTTGTCAACGGAATTTTGTGGCTGTCGCTGATGGTTATCTTTTTAAAA
+          	||||||||||||||||||||||||||||||||||||_______|||||||||||||||||
+query:    	AATCTCTTCAACCTTGTCAACGGAaTTTTGTGGCTg-------tggttatctttttaaaa
+
+template: 	GATAAACAGATGGGAAATTCTCACGAAGGGTAA
+          	|||||||||||||||||||||||||||||||||
+query:    	gataaacagatgggaaattctcacgaagggtaa
+
+# b0842_3
+template: 	ATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTC
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	ATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTC
+
+template: 	TGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATG
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	TGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATG
+
+template: 	TTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACTTCAATGACCGCA
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	TTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACTTCAATGACCGCA
+
+template: 	TATCTGGCGGGCGGGATGTTTTTACAATGGCTCCTGGGGCCGCTGTCGGATCGTATTGGT
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	TATCTGGCGGGCGGGATGTTTTTACAATGGCTCCTGGGGCCGCTGTCGGATCGTATTGGT
+
+template: 	CGCCGTCCGGTGATGCTGGCGGGGGTGGTGTGGTTTATCATCACCTGTCTGGCAATATTA
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	CGCCGTCCGGTGATGCTGGCGGGGGTGGTGTGGTTTATCATCACCTGTCTGGCAATATTA
+
+template: 	CTGGCGCAAAACATTGAACAATTCACTCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGT
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	CTGGCGCAAAACATTGAACAATTCACTCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGT
+
+template: 	TTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATC
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	TTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATC
+
+template: 	AAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTG
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	AAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTG
+
+template: 	GGCGCGGCGTGGATCCATGTGCTGCCCTGGGAAGGGATGTTTGTCTTGTTTGCCGCATTG
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	GGCGCGGCGTGGATCCATGTGCTGCCCTGGGAAGGGATGTTTGTCTTGTTTGCCGCATTG
+
+template: 	GCAGCGATCTCCTTTTTCGGTCTGCAACAAGCCATGCCTGAAACCGCCACGCGTATAGGC
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	GCAGCGATCTCCTTTTTCGGTCTGCAACAAGCCATGCCTGAAACCGCCACGCGTATAGGC
+
+template: 	GAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGC
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	GAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGC
+
+template: 	TTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGCCTGCCATTGCTGGCGTGGATCGCC
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	TTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGCCTGCCATTGCTGGCGTGGATCGCC
+
+template: 	CAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTG
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	CAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTG
+
+template: 	CAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGACCTCG
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	CAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGACCTCG
+
+template: 	CGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATTATTGGTCTGTTG
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	CGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATTATTGGTCTGTTG
+
+template: 	GTCGCTGCTGCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACCGCCGGGTTA
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	GTCGCTGCTGCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACCGCCGGGTTA
+
+template: 	AGTATTTATGCTTTCGGCATTGGTCTGGCGAATGCGGGACTGGTGCGATTAACCCTGTTT
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	AGTATTTATGCTTTCGGCATTGGTCTGGCGAATGCGGGACTGGTGCGATTAACCCTGTTT
+
+template: 	GCCAGCGATATGAGTAAAGGTACGGTTTCTGCGGCGATGGGAATGCTGCAAATGCTGATC
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	GCCAGCGATATGAGTAAAGGTACGGTTTCTGCGGCGATGGGAATGCTGCAAATGCTGATC
+
+template: 	TTTACCGTCGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAACGGACTGTTT
+          	||||||||_||||||||||||||||||||||||||||||||||||||||||||||_||||
+query:    	TTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAACGGACAGTTT
+
+template: 	AATCTCTTCAACCTTGTCAACGGAATTTTGTGGCTGTCGCTGATGGTTATCTTTTTAAAA
+          	||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
+query:    	AATCTCTTCAACCTTGTCAACGGAATTTTGTGGCTGTCGCTGATGGTTATCTTTTTAAAA
+
+template: 	GATAAACAGATGGGAAATTCTCACGAAGGGTAA
+          	|||||||||||||||||||||||||||||||||
+query:    	GATAAACAGATGGGAAATTCTCACGAAGGGTAA
+