Mercurial > repos > iuc > kraken_taxonomy_report

comparison kraken_taxonomy_report.xml @ 4:27d65c78863c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/kraken_taxonomy_report commit 04943848aa0f6637b56303ec6026dcb475ecb9e5"
author iuc
date Sun, 20 Mar 2022 16:39:48 +0000
parents 528a1d91b066
children bfae8da6082c
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3:b11b3ac48bb9 4:27d65c78863c
1 <?xml version="1.0"?> 1 <tool id="kraken_taxonomy_report" name="Kraken taxonomic report" version="0.0.3" profile="16.04">
2 <tool id="kraken_taxonomy_report" name="Kraken taxonomic report" version="0.0.2">
3 <description>view report of classification for multiple samples</description> 2 <description>view report of classification for multiple samples</description>
4 <requirements> 3 <requirements>
5 <requirement type="package" version="1.66">biopython</requirement> 4 <requirement type="package" version="1.66">biopython</requirement>
6 </requirements> 5 </requirements>
7 <stdio>
8 <exit_code range="1:" />
9 <exit_code range=":-1" />
10 </stdio>
11 <version_command>python '${__tool_directory__}/kraken_taxonomy_report.py' --version</version_command> 6 <version_command>python '${__tool_directory__}/kraken_taxonomy_report.py' --version</version_command>
12 <command><![CDATA[ 7 <command><![CDATA[
13 #for $input_classification in $classification: 8 #for $input_classification in $classification:
14 ln -s "${input_classification}" "${input_classification.element_identifier}" && 9 ln -s "${input_classification}" "${input_classification.element_identifier}" &&
15 #end for 10 #end for