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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/last commit d48fa8fc8724e2a1c659dde00cad9d6db3e710db"
author iuc
date Thu, 10 Sep 2020 16:08:15 +0000
parents 9a7e91fc6562
children 8705e0d74a0f
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# LAST version 1021
#
# a=7 b=1 A=7 B=1 e=22 d=13 x=21 y=9 z=21 D=1e+06
# R=10 u=0 s=2 S=0 M=0 T=0 m=10 l=1 L=999999999 n=10 k=1 w=1000 t=2.82533 j=3 Q=0
# ref_db
# Reference sequences=1 normal letters=16571
#
#    A  R  N  D  C  Q  E  G  H  I  L  K  M  F  P  S  T  W  Y  V  B  J  Z  X  *
# A  5 -2 -2 -2 -1 -1 -1  0 -2 -2 -2 -1 -1 -3 -1  1  0 -3 -2  0 -2 -2 -1 -1 -6
# R -2  6 -1 -2 -4  1 -1 -3  0 -3 -3  2 -2 -4 -2 -1 -1 -4 -3 -3 -1 -3  0 -1 -6
# N -2 -1  6  1 -3  0 -1 -1  0 -4 -4  0 -3 -4 -3  0  0 -4 -3 -4  5 -4  0 -1 -6
# D -2 -2  1  6 -4 -1  1 -2 -2 -4 -5 -1 -4 -4 -2 -1 -1 -6 -4 -4  5 -5  1 -1 -6
# C -1 -4 -3 -4  9 -4 -5 -4 -4 -2 -2 -4 -2 -3 -4 -2 -1 -3 -3 -1 -4 -2 -4 -1 -6
# Q -1  1  0 -1 -4  6  2 -2  1 -3 -3  1  0 -4 -2  0 -1 -3 -2 -3  0 -3  4 -1 -6
# E -1 -1 -1  1 -5  2  6 -3  0 -4 -4  1 -2 -4 -2  0 -1 -4 -3 -3  1 -4  5 -1 -6
# G  0 -3 -1 -2 -4 -2 -3  6 -3 -5 -4 -2 -4 -4 -3 -1 -2 -4 -4 -4 -1 -5 -3 -1 -6
# H -2  0  0 -2 -4  1  0 -3  8 -4 -3 -1 -2 -2 -3 -1 -2 -3  2 -4 -1 -4  0 -1 -6
# I -2 -3 -4 -4 -2 -3 -4 -5 -4  5  1 -3  1 -1 -4 -3 -1 -3 -2  3 -4  3 -4 -1 -6
# L -2 -3 -4 -5 -2 -3 -4 -4 -3  1  4 -3  2  0 -3 -3 -2 -2 -2  1 -4  3 -3 -1 -6
# K -1  2  0 -1 -4  1  1 -2 -1 -3 -3  5 -2 -4 -1 -1 -1 -4 -3 -3 -1 -3  1 -1 -6
# M -1 -2 -3 -4 -2  0 -2 -4 -2  1  2 -2  6  0 -3 -2 -1 -2 -2  1 -3  2 -1 -1 -6
# F -3 -4 -4 -4 -3 -4 -4 -4 -2 -1  0 -4  0  6 -4 -3 -2  0  3 -1 -4  0 -4 -1 -6
# P -1 -2 -3 -2 -4 -2 -2 -3 -3 -4 -3 -1 -3 -4  8 -1 -2 -5 -4 -3 -2 -4 -2 -1 -6
# S  1 -1  0 -1 -2  0  0 -1 -1 -3 -3 -1 -2 -3 -1  5  1 -4 -2 -2  0 -3  0 -1 -6
# T  0 -1  0 -1 -1 -1 -1 -2 -2 -1 -2 -1 -1 -2 -2  1  5 -4 -2  0 -1 -1 -1 -1 -6
# W -3 -4 -4 -6 -3 -3 -4 -4 -3 -3 -2 -4 -2  0 -5 -4 -4 11  2 -3 -5 -3 -3 -1 -6
# Y -2 -3 -3 -4 -3 -2 -3 -4  2 -2 -2 -3 -2  3 -4 -2 -2  2  7 -2 -3 -2 -3 -1 -6
# V  0 -3 -4 -4 -1 -3 -3 -4 -4  3  1 -3  1 -1 -3 -2  0 -3 -2  4 -4  2 -3 -1 -6
# B -2 -1  5  5 -4  0  1 -1 -1 -4 -4 -1 -3 -4 -2  0 -1 -5 -3 -4  5 -4  0 -1 -6
# J -2 -3 -4 -5 -2 -3 -4 -5 -4  3  3 -3  2  0 -4 -3 -1 -3 -2  2 -4  3 -3 -1 -6
# Z -1  0  0  1 -4  4  5 -3  0 -4 -3  1 -1 -4 -2  0 -1 -3 -3 -3  0 -3  5 -1 -6
# X -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -6
# * -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6 -6  1
#
# Coordinates are 0-based.  For - strand matches, coordinates
# in the reverse complement of the 2nd sequence are used.
#
# name start alnSize strand seqSize alignment
#
# m=1 s=35 d=1 c=0.004 t=1e-05 M=7 S=1.7
# trans=-62
# cismax=97557
# GT=8 GC=-3 AT=-8 NN=-10
# AG=8 AC=-8 NN=-10
#
# Query sequences=1
a score=4261 mismap=1e-10 don=AT
s humanMito 578 1068 + 16571 GTTTATGTAGCTTACCTCCTCAAAGCAATACACTGAAAATGTTTAGACGGGCTCACATCA-CCCCATAAACAAATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTCCAGTGAGTTCACCCTCTAAATCACCACGATC---AAAAGGGA-CAAGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTTAGCCTAGCCACACCCCCACGGGAAA-CAGCAGTGATTAACCTTTAGCAATAAACGAAAGTTTAACTAAGCTATA--CTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAATAAAGCTAAAAC---TCACCT---GAGTTGTAAAAAACTCCAGTTGACACAAAATAGACTA-CGAAAGTGGCTTTAACATATCT-GAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTATGCTTAGCCCTAAACCTCAACAGTTAAATCAACAAAACTGCTCGCCAGAACACTACGAGCCACAGCTTAAAACTCAAAGGACCTGGCGGTGCTTCATATCCCTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCACCTC-TTGCT----CAGCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAGCGCAAGTA-CCCA-CGTAAAGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGCTACATTTTCTACCCCAGAAAACTACGATAGCCCTTATGAAA--CTTAAGGGTCGAAGGTGGATTTAGCAGTAAACTGAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAGTATACTTCAAAGGACATTTAACTAAAACCCCTACGCATTTATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAaagtgcacTTGGACGAACCAGAGTGTAGCTTAACA-C--AAAGCACCCAACTTACACTTAGGAG
s fuguMito    0 1061 + 16447 GCTAGCGTAGCTTAAC----CAAAGCAGAGTACTGAAGATGCTAAGATGGGCCCTGAAAAGTCCCGCAGGCACAAAAGCTTGGTCCTGACTTTACTAACAACTCTGATCAAACTTACACATGCAAGTATCCGCATCCCAGTGAAaatgccccccg---ccccccgtcCGGAAATAGGGAGTTGGTATCAGGCACACAAATTTGTAGCCCATGACACCTAGCTTTGCCACGCCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTTAGTTATGATCTAA----AGAGTCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAGAGACCCAAGTTGTTAGCCAACGGCGTAAAGGGTGGTT-Agaacta----aaaacaacaaa-ctgagACCGAACACCTTCAAGGCTGTTATACGCTTCCGAAGCAACGAAGAACAATAACGAAAGTAGCCTCA-C-TAACTCGAACCCACGAAAGCTAGGACACAAACTGGGATTAGATACCCCACTATGCCTACCCCTAAAC-ACGATA--TGAAACTACGTACATATCCGCCTGGTTACTACGAGCATTAGCTTAAAACCCAAAGGACTTGGCGGTGCTTTAAAACCATCTAGAGGAGCCTGTTTTAAAACCGATACTCCCCGTTCAACCTCACC-CCTCCTTGTTTTAACCGCCTATATACCACCGTCGTCAGCCTACCCTG-TGAAGGGCAAATAGTAGACAAAATTGGCACAGC-CAAAAACGTCAGGTCGAGGTGTAGCGAATGGAGGGGGACAAAATGGGCTACATTCTCTGCCT-AGAGAAC-ACGAAAGATGTGCTGAAATGCACAC---CCGAAGGAGGATTTAGCAGTAAGCAAGAAATAGAGTGTCATGCTGAAACCGGCTATGAAGCGCGCACACACCGCCCGTCACTCTCCCCAA--Actctt-aatttaaaaataactaATAAGCC-Ac-caaaagaaaaggggaggcAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAAAAACCGGAGCATAGCTTAACAGCTTAAAGCACCTCCCTTACACCGAGTTG
p                            []]]]]```avwyy|}jjjj}}~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~jjjj~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~}|jjjj|||||||||||P|||||||||||||||||||||}}}}~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~UU~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~[~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~UU~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~}|{yKKKKKKKKKHG?=877777777654.--------*)))(%%%

a score=327 mismap=0.42 acc=AG don=AT
s humanMito 15615 105 + 16571 GCGTCCTTGCCCTATTACTATCCATCC--TCATCCTAGCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCACTTT
s fuguMito   1061  91 + 16447 ACGCCCGTGC---AAATCGAGCTGCCCCGACA-CCTAACAGCtagcccccacc-ccac----cca--caaCAAACCACTATAAAT-ACCCCCTAAG---AT-ACTTa
p                             $$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$

a score=42670 mismap=1e-10 acc=AG don=GT
s humanMito 1711 10695 + 16571 AC-AACCTTAGCCAAACCATTTACCCAAATAAAGTATAGGCGATAGAAATTGAAACCTGGCGCAATAGATATAGTACCGCAAGGGAAAGATGAAA---AATT---ATAACC-----AAGCATAATATAGCAAGGACTAACCCCT-ATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAGAGCCAAAG-CTAAGACCCCCGAAACCAGACGAGCTAC-CTAAGAACAGC--TAAAAGAGCACACCCGTCTATGTAGCAAAATAGTGGGAAGATTTATAGGTAGAGGCGACAAACCTACCGAGCCTGGTGATAGCTGGTTGTCCAAGAT-AGAATCTTAGTTCAAC--TTTAAATT--TGCCCACAGAACCCTCTAAAT---CCC--CTT---GTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGAAAAAACCTTGTAGAG-AGAGTA--------AAAAATTTAA--CACC---CATA-GTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAA-CAC--CCACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACAC-----CCAATTGGACCAATCTAT-CACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTCC--GCATAAGCCTGCGTCAGATCAAAACACTGAACTGACAATTAACAG-CC----CA-------ATATCTACAATCAAC---CAACAAGT----CATTATTACCCTCA-CTGTCAACCCAACACAGGCATGCTCATAAGGAAAGGTTAAAAAAAGTAAAAGGAACTCGGCAAAC-CTTA-CCCCGCCTGTTTACCAAAAACATCACCTCTAGCATCACCAGTATTAGAGG-CACCGCCTGCCCAGTGAC-ACATGTTTAACGGCCGCGGTACCCTAACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAAATAGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTC-TTACTTTTAACCAGTGAAATTGACCTGCCCGTGAAGAGGCGGGCATGACACAGCAAGACGAGAAGACCCTATGGAGCTTTAATTTATTAATGCAAACAGTACCTAACAA---ACCC-----ACAGGTCCTAAAC-TACCAAACCTGCATTAAAAATTT---------CGGTTG-GGG----CGA----CCTCGGAGCAGAACCCAacctccgagcagtaCATGCT-AAGACTTCACCAGTCAAAG---C-GAACTACTATACTCAAT--TGATC--CAATAACTTGACCAACGGAACAAGTTACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCGGTTTCTATCTACTTCAAATTCCTC---CCTGTACGAAAGGACAAGAGAAATAAGGCCTAC-TTCACA-AAGCGCCT-TCCCCCGTAAATGATATCATCTCAACTTAGTATTATA-CCCACACCCAC--CCAAGAACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAACTTAaaactTTACAGTCAGAGGTTCAATTCCT----CTT-CT-TAACAACA--------TACCCA--TGGCCAACCTCCTACTCCTCATTGTACCCATTCTAATCGCAATGGCATTCCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTACAACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCGCCACATCTACCATCAC------CCTCTACATCACCGCCCCGACCTTAGCTCTCACCATCGCTCTTCTACTATGAAC-CC-----CCCTCCCCATACCCAACCCCCTGGTCAACCTCAACCTAGGCC-TCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCCAAACAATCTCATATGAAGTCACCCTAGCCATCATTCTACTATCAAC-ATTACTAATAAGTGGCTCCTTTAACCTCTCCACCCTTATCACAACACAAGAACACCTCTGATTACTCCTGCCATCATGACCCTTGGCCATAATATGATTTATCTCCACACTAGCAGAGACCAACCGAACCCCCTTCGACCTTGCCGAAGGGGAGTCCGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCTTCATAGCCGAATACACAAACATTATtataataAACACCCTCACCACTACAATC---TTCCTAGGAAC--AACATATGACGCACTCTCCCCTGAACTCTACACAACATATTTTGTCACCAAGAC--CCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACCCCCGATTCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTCACCCTAGCATTACTTATATGATATGTCTC-CATACCCAT-TACAATCTCCAGCATTCCCCCTCAAACCTAA---GAAATATGTCTGATA-AAAGAGTTACTTTGATAGAGTAAATAATAGGAGCTTAAA--CCCCCTTATTTCT-AGGACTATGAGAATCGAACCCATCCCTGAGAATCCAAAATTCTCCGTGCCACCTATCACACCCCATCCTAAAGTAAGGTCAGCTAAATAAGCTATCGGGCCCATACCCCGAAAATGTTGGTTATA--CCCTTCCCGT-ACTAATTAATCCC--------CTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCACA-CTCATCACAGCGCTAAGCTCGCACTGATTTTTTACCTGAGTAGGCCTAGAAATAAACATGCTAGCTTTTATTCCAGTTCTAACCAAAAAAATAAACCCTCGTTCCACAGAAGCTGCCATCAAGTATTTCCTCACGCAAGCAACCGCATCCATAA---TCCTTCTAATAGCTATCCTCTTCAACAATATACTCTCCGGACAATGAA--CCATAACCAATACTACCAatcaatactcatcattaataatcataatGGCTATAGCAATAAAACTAGGAATAGCCCCCTTTCACTTCTGAGTCCCAGAGGTTACCCAAGGCACCC--CTCTGACATCCGGCCTGCTTCTTCTCACATGACAAAAACTAGCCCCCATCTCAATCATATACCAAATCTCTCCCTCACTAAACGTAAGC-CTTC-TCCTCACTCTCTCAATCTTATCCATCATAGCAGGCAGTTGAGGTGGATTAAACCAAACCCAGCTACGCAAAATCTTAGCATACTCCTCAATTACCCACATAGGATGAATAATAGCAGTTCTACCGTACAACCCTAACATAACCATTCTTAATTTAACTATTTATATTATCCTAACTACTACCGCATTCCTA-CTACTCAACTTAAACTCCAGCACCAC-----GACCCTACTACTATCTCGCA--CCTGAAACAAGCTAACATGACTAACACCCTTAATTCCATCC--ACCCTCCTCTCCCTAGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCG---AAGAATTCACAAAAAACAATAGCCTCATCATCCCCACcatcatagccaccat---caCCCTCCTTAACCTCTACTTCTACCTACGCCTAATCTACTCCACCTCAATCACACTACTCCCCATAT---CTAACAACGTAAAAATAAAATGACAGTTTGAAC--ATACAAAACCCACCCCATT-CCTCCC-CACACTCATCGCCCT-TACCACGCTACTCCTACCTATCTCCCCTTTTATACTAATAATC-TTAT------AGAAATTTAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGT--AAGTTGCAATACTTAATTTCTGCAACAGCTAAGGACTGCAAAACCCCACTCT-GCATCAACTGAACGCAAATCAGCCACTTTAATTAAGCTAA-GCCCTTACTAGACCAATGGGACTTAAACCCACAAACACTTAGTTAACAGCTAAGCACCCTAATC-AACTGGCTTCAATCTA-CTTCTCCCGCC--GCCGGGAAAAAAGGCGGGAGAAGCCCCGGCAGGTTTGAAGCTGCTTCTTCGAATTTGCAATTCAATATGAAAATCACCTCGGAGCTGGTAAAAAGAGGCCT--AACCCCTGTCTTTAGATTTACAGTCCAATGCTTCACTCAGCCATTTTACC-TCACCC---CCAC---TGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCGCATGAGCTGGAGTCCTAGGCACAGCTCTAAGCCTCCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAATACCCATCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAAtaaTCGGTGCCCCCGATATGGCGTTTCCCCGCATAAACAACATAAGCTTCTGACT-CTTACCTCCCTCTCTCCTACTCCTGCTCGCATCTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAA-CTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCTAGCAGGTGTCTCCTCTATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAAACCCCCTGCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTCCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGACCGCAACCTCAAcaccaccttcttcgaccccgccggaggaggagACCCCATTCTATACCAACACCTATTCTGATTTTTCGGTCACCCTGAAGTTTATATTCTTATCCTACCAGGCTTCGGAATAATCTCCCATATTGTAACTTACTACTCCGGAAAAAAAGAACCATTTGGATACATAGGTATGGTCTGAGCTATGATATCAATTGG-CTTCCTAGGGTTTATCGTGTGAGCACACCATATATTTACAGTAGGAATAGACGTAGACACACGAGCATATTTCACCTCCGCTACCATAATCATCGCTATCCCCACCGGCGTCAAAGTATTTAGCTGACTCGCCACACTCCACGGAAGCAATATGAAATGATCTGCTGCAGTGCTCTGAGCCCTAGGATTCATCTTTCTTTTCACCGTAGGTGGCCTGACTGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACACGTACTACGTTGTAGCTCACTTCCACTATGTCCTATCAATAGGAGCTGTATTTGCCATCATAGGAGGCTTCATTCACTGATTTCCCCTATTCTCAGGCTACACCCTAGACCAAACCTACGCCAAAATCCATTTCACTATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTCGGCCTATCCGGAATGCCCCGACGTTACTCGGACTACCCCGATGCATACACCACATGAAACATCC-TATCATCTGTAGGCTCATTCATTTCTCTAACAGCAGTAATattaataattttcatgatTTGAGAAGCCTTCGCTTCGAAGCGAAAAGTCCTAATAGTAGAAGAACCCTCCATAAACCTGGAGTGACTATATGGATGCCCCCCACCCTACCACACATTCGAAGAACCCG----TATACATA---AAA--TCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAAGCTGGTTTCAAGCCAACCCCATGGCCTCCATG--ACTTT-TTCAAAAAGGTATTAGAAAAA---CCATTTCATAACTTTGTCAAAGTTAAATTATAGGCTAAA-TCCTATATATCTT------AATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCT-TATCACCTTTCATGATCACGCCCTCATAATCATTTTCCTTATCTGCTTCCTAGTCCTGTATGCCCTT-TTCCTAACACTCACAACAAAACTAACTAATACTAACA-TCTCAGACGCTCAGGAAATAGAAACCGTCTGAACTATCCTGCCCGCCATCATCCTAGTCCTCATCGCCCTCCCATCCCTACGCATCCTTTACATAACAGACGAGGTCAACGATCCCTCCCTTACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCCTACATACTTCCCCCATTATTCCTAGAACCAGGCGACCTGCGACTCCTTGACGTTGACAATCGAGTAGTACTCCCGATTGAAGCCCCCATTCGTATAATAATTACATCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGACGTCTAAACCAAACCACTTTCACCGCT-ACACGACCGGGGGTATACTACGGTCAATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAGAATTAATTCCCCTAAAAATCTTTGAAATAGGGCCCGTATTTACCCTATAGCAC-------CCCCTCTaccccctctaG-AGCCCACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGAACC-AACACCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATGGCC-CACCATAATTACCCCCATACT--CCTTACAC--------TATTCCTCAT----CACCCAACTAAAAATATTAAACACAAACTACCACCT--ACCTCCCTCACCAAA-----GC-CCATAAAAATAAAAAATTATAACAAACCCTGAGAACCAAAATGAACGAAAATCTG-TTCG-CTTCATTCATTGCCCCCACAATCCTAGGCCTACCCGCCG-CAGTACT-GATCATTCTATTTCC-----CCCTCTATTGATCCCCACCTCCAAATATCTCAT-----CAACAACCGACTAATCAC-CACCCAA--CAA-TGACTAATCAAACTAACCTCAAAACAAATGATAGCCATACAC--AACACTAAAGGACGAACCTGA-TCTCTTATACTAGTATCCTTAATCAT-TT--TTATTGCCA-CAACTAACCTCCTCGGACTCCTGCCTCACTCATTTACACCAAccacccaactatctATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGC-GCAGTGATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCA-CTTCTTACCACAAGGCACACCTACAC-CCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGTACGCCTAACCGCTAACATTACTGCAGGCCACCTACTCATGCACCTAATTGGAAGCGCCACCCTAGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCT-TCACAATTCTAA-TTCTACTGACTATCCTAGAAATC--GCTGTCGC--CT--TAATCCAAGCCTACGTTTT----CACAC-----TTCTAGTAAGCC-TCTA--CCT------GCACGACAACACATAATGACCCACCAATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCGGCCTAGCCATGTGATTTCACTTCCACTCCATAACGCTCCTCATA---CTAGGCCTACTAACCAAC--ACACTAACCATATACCAATGGTGGCGCGATGTAACACGAGAAAGCACATACCAAGGCCACCACACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTATTACCTCAGAAGTTTTTTTCTTCGCAGGATTTTTCTGAGCCTTTTACCACTCCAGCCTAGCCCCTACCCCCCAACTAGGAGGGCACTGGCCCCCAACAGGCATCACCCCGCTAAATCCCCTAGAAGTCCCACTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAATAGAAAACAACCGAAACCAAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTG-CTTCATCCGCCAACTAATATTTCACTTTACATCCAAACATCACTTTGGCTTCGAAGCCGCCGCCTGATACTGGCATTTTGTAGATGTGGTTTGACTATTTCTGTATGTCTCCATCTATTGATGAGGGTC-TTACTCTTT-TAGTATAAA--TAGTACCGTTAACTTCCAATTAACTAGTTTTGACAACATTCAAA--AAAGAGTAATAAACTT-C--GCCTTAATTTTAATAATCAACACC-CTCCTAGCCTTACtac-taataattattaCATTTTGACTACCACAAC---TCAAC-GGCTACATAGAAAAATCCACCCCTTACGAGTGCGGCTTCGACCCTATATCCCCCGCCCGCGTCCCTTTCTCCATAAAATTCTTCTTAGTAGCTATTACCTTCTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTACCATGAG-----CC-CTACAAACAACTAACCTGCCACTAATAGTTATGTCATCC-CTCTTATTaatcatcatCCTAGCCCTAAGTCTGGCCTATGAGTGACTACAAAAAGGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTTCGACTCATTAAATTATGATAAT----CAT-ATTTACCAAATGCCCCTCATTTACATAAATATTATACTAGCATTTACC---ATCTCACTT-CTAGGAATA------CTAGTATATCGC----TCACACCTCATATCCTCCCTACTATGCCTAGAAGGAATAATACTATCGCTGTTCATTATAGCTACTCTCAT----AACCCT-C-AACACCCACTCCC----TCTTAGCCAATATTGTGCCTATTGC-CATACTAGTCTTTGCCGCCTGCGAAGCAGCGGTG--GGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATA-TTA--CTA-CCAC-TGACATGACTTTCCAAAAAGCACATAATT-TGA--ATCAACACAACCACCCACAGCCTAATTATTAGcatcatccc---cctactattttTTAACCAAATCAACAACAACCTATTTAGCTGTTCCCCAAC-----CTTTTCCTCCGACCCCCTAACAACCCCCCTCCTAATACTAACTACCTGACTCCTACCCCTCACAATCATGGCAAGCCAACGCCACTTATCCAGCGAACCACTATCACGAAAAAAACTCTACCTCTCTATACTAAtctccctacaaatctccttaATTATAACATTCACAGCCACAGAACTAATCATATTTTATATCTTCTTCGAAACCACACTTATCCCCACCTTGGCTATCATCACCCGATGAGGCAACCAGCCAGAACGCCTGAACGCAGGCACATACTTCCTATTCTACACCCTAGTAGGCTCCCTTCCCCTACTCATCGCACTAATTTACACTCACAACACCCTA--GGCTCACTAAACATTCTACTACTCACTCTCACT---GCC--CAAGAACTATCAAACTCCTGAGCCAACAACTTAATATGACTAGCT---TACACAATAGCTTTTATAGTAAAGATACCTCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGAAGCCCCCATCGCTGGGTCAATAGTACTTGCCGCAGTACTCTTAAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACCCCCTGA-CAAAACACATAGCCTACCCCTTCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTACGACAAACAGACCTAAAATCGCTCATTGCATACTCTTCAATCAGCCACATAGCCCTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGCAGTCATTCTCATAATCGCCCACGGACTCACATCCTCATTACTATTCTGCCTAGCAAACTCAAACTACGAACGCACTCACAGTCGCATCATAATCCTCTCTCAAGGACTTCAAACTCTACTCCCACTAATAGCTTTTTGATGACTTC-TAGCAAGCCTCGCTAACCTCGCCTTACC-CCCCACTATTAACCTACTGGGAGAACTCTCTGTGCTAGTAACCACGTTCTCCTGATCAAAT-ATCAC--TCTCCTA-----CTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACATATTTACCACAACACAATG-GGGCTCACTCAC--CCACCACATTAACAACATAAAACCCTCATTCACACGagaaaacACCCTCATGT--TCATACACCTATCC-CCCATTCTCCTCC----TATCCCTCAACCCCGAC--ATCATTACCGGGTTTTCCTCTTGTAAATATAGTTTAACCAAAACATCAGATTGTGAATCTGACAACAGAGGCTTACGACCC-CTTATTTACCGAGAAAG---CTC-ACAA-GA--ACTGCTAA-C-TCATGCCCCCATGTCTAACAACATGGCT--TT---CTCAACTTTTAAAGGATAACAGCT-ATCCATTGGTCTTAGGCCccaaaaa-tttTGGTGCAACTCCAAATAAAAGTAATAACCATGCACACTACTATAACCACCCTAACCCTGA---CTTCCCTAATTCCCCCCATCCTTACCAC-CCTC
s fuguMito  1152 10820 + 16447 actaaacaaaac-aaatcatttttccACCCTA-GTATAGGAGATAGAAAA-GGAACTAGGAGCTATAGATAAAGTACCGCAAGGGAACGctgaaagagaaatgaaataacccagtaaagtaaaaaaaagcagaga-ttaCACCTCGTACCTTTTGCATCATGATTTAGCTAGTA-TAATTAGGCAAAGAGCACTTTAGTCTAACACCCC-GAAACTGAATGAGCTACTCCAAGA-CAGCCTTTATAGGGCACATCCGTCTCTGTGGCAAAAGAGTGGAAAGAGCTTTGAGTAGAGGTGATAAACCTACCGAGTTCAGTTATAGCTGGTTGCCCGAGAACTGAGTATAAGCTCAGCCTTTTGGCTTCTTAACTCCATAACTATTTATATTAACCCGACTTTAAGAAACCAAAAGAGTTAATCAAAGGGGGTACAGCCCCTTTGATACAAG-AAACAACTTTTAACAGGAGGATAAGGATCATAAAAAATCAAGGCACCGCGCTTAAGTAGGCTTAGAAGCAGCCACCAC--AAGAAAGCGTTAAAGCTCTAGCACATCC-CTGCC--ACAAATACCAA---TAAAAC---ACTCCTAACCCCTTCCCCTACCGGGCTTTTCTATGCTTCC-ATAGAAGAAATTATGCTAAAATGAGTAATAAGGGGCCGACCCCCTCCAAGCACAAGTGTACATCAGAACGAACCCCC--ACCGAAATTCAACGGACCCAACCAAAGAgggaaataaatattaaactcacaacaagaaaaacatt-taacacttttCCGTTACCCCTACACTGGTGTGCCAAATAGGAAagactaaaagaaaaagaaggaactCGGCAAACTCAAAGCCTCGCCTGTTTACCAAAAACATCGCCTCTTGCTTCAA-TGAATAAGAGGTCAC-GCCTGCCCTGTGACTATATGTTTAACGGCCGCGGTATTTTGACCGTGCAAAGGTAGCGCAATCACTTGTCCTTTAAATGTGGACCTGTATGAATGGCATAACGAGGGCTTAGCTGTCTCCTTTCTCA-AGTCAATGAACTTGATCTCCCCGTGCAGAAGCGGGGATAAAACCATAAGACGAGAAGACCCTATGGAGCTTTAG---ACAAA---AAACAGCCCCTGTCAATAAACCCTAAATAAAGGGAATAAACCTAGTGAACCTGTTTTAATGTCTTTGGTTGGGGCGACCGCGGGGTAACAAAAAACCCCCATGTGGAATGAAAACACC---CTTTTTAAACCCAAGA-GTCACCACTCTAGGATACAGAACATCTG-AC-CAATAATGATCGCCTAAAGCC-GATTAACGAACCGAGTTACCCTAGGGATAACAGCGCAATCCTCTTTTAGAGTCCATATCGACAAGAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCAGCCGCTATTAAAGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCGGAGTAATCCAGGTCAGTTTCTATCTA--TGAAGTACCTTTTTCCAGTACGAAAGGACCGAAAAAGAGGGGCCAATGTACAAACAAGCCCCACTCTCAC-TTGCTGAATCCAGCTCAAGCAAATAAGAGAGTACAAAACtaagtcaaagaacatgacatGTTAGTGTGGCAGAGCCCGGTATT-GCAAAAGCCTTAAACCCTT-CGAACAGAGGTTCAACTCCTCTCCCTAACTATGACTACAATACTAATTACCCACTTAATTCACCCCCTAACCATTATTGTACCCGTTCTACTAGCCGTAGCTTTCTTAACATTAATTGAACGAAAAGTTTTAGGTTACATGCAGTTACGAAAGGGCCCCAACATCGTAGGACCTTACGGACTCCTCCAACCCATCGCCGATGGCGTTAAACTTTTCATCAAAGAACC-----AGTCCGAC-CATCTACCTCCGCTCCCATCCTATTCATTATTGCCCCTACACTAGCCCTTACTCTCGCCATAATAATATGAACACCAATGCCCCTCCCC-TACCC--CATCCTTG---ACTTAAATCT-GGCCATTCTATTTGTCCTAGCTATCTCTAGCTTGGCAGTCTACTCTATTCTGGGCTCCGGATGGGCCTCCAACTCAAAATATGCCCTTATAGGATCCCTACGAGCAGTTGCACAAATAATCTCATACGAAGTAAGTCTAGGGCTAATCCTTTTATCattgattatttttaca-ggcAACTTTACCCTACAAACATTTAACGTCACCCAGGAAAGCATTTGACTAATCATCCCAACATGACCCCTTGCAGCAATATGATACATCTCCACGCTAGCCGAAACAAACCGAGCCCCCTTTGACCTAACAGAGGGGGAGTCCGAACTGGTATCTGGGTTCAATGTTGAATATGCAGGAGGTCCCTTTGCCCTATTTTTTCTGGCAGAATATGCCAACATCCTCTTAATAAACACGCTCTCCAC---AATCCTGTTCCTAGGAGCCTTACATATGCC-CGCTCTTCC-AGAACTAACCTCTATCAATTTAATatcaaaaacagcca--ttttatcCCTCATCTTCCTATGAGCCCGAGCCTCCTACCCACGATTCCGATATGACCAGCTAATACACCTCACATGAAAAAACTTCCTACCACTTACATTAGCATTCATTATCTGACAT--CTTGCACTCCCAACTACAATAGCAGGCCTTCCCCCTCAAATATAAAAGGAACTGTGCCTGAAACAAAGGACCACTTTGATAGAGTGAATCATGAGGG-TTAAATTCCCTCCAGCTCCTTAGAAAGAAGGGACTTGAACCCAACCCGGAGAGATCAAAACTCTCAGTGCTTCCACT-ACACCACTTTCTA--GTAAAGTCAGCTAAATAAGCTTTTAGGCCCATACCCTAAAAATGGAGGTTAAAATCCC--CCCTTTACAAATGAA-CCCTTATATTACTG-CC--TCCC---TTTTATTTGGCCTGCTGT-TAGGTACAACT-ATTACAACTACCAGCACACACTGACTAATTGCATGAATGGGCCTAGAAATTAACACCCTAGCTATTATCCCCCTAATAGCCCAACAACACCACCCACGAGCAATTGAAGCCACTACAAAATACTTCTTGACTCAAGCTGCCGCAGCAGCAACCCTCCTCCTCGCAGCTA-CAAC--CAACGCCTGAATAACAGGCCAATGAGAGCTACAGC--AAGCTACCCACCCAGTCCCAACAACCATAATTACCATTGCATTAGCCTTAAAAATTGGACTAGCCCCACTCCACACCTGACTCCCAGAAGTAATACAAGG-ACTAGAC-CTTACAACTGGACTTATCCTGGCCACATGACAAAAAATCGCACCATTCTCCCTTCTATTACAAAT-TCAACCTAA-TAACCAAACACTCTTAATCCTC---CTCGCCATCCTCTCCATACTTGTCGGCGGATGAGGGGGCCTAAATCAAACCCAAGTACGTAAAATTCTAGCCTACTCCTCCATCGCCCACCTAGGCTGAATAGTCATTATTCTTCAATTCTCACCAACCCTAGCTGTAATAACCCTAGCACTTTATATCATCAtaacctcctccaccttccttgCTT-TCATGAtaaacaaaaccacaacaatTGGAACCTT-AACAATCTCGTGAGCCAAAACCC--CGATCAT----TTCATCCCTAATACC--CCTAATCCTTCTGTCATTAGGAGGTTTACCCCCACTAACTGGCTTCATGCCTAAATGA-C--TTATCCTTCAAGAACTTACAAAA--CAAGA-CCTAGGCATAACAGCCACATTAGCAGCCCTTAGCGCCCTACTAAGTCTTTATTTCTATCTACGCCTATCCTACGCTATAACCCTAAC-CATCTCCCCAAATAACCTAACA--GGAACACTACCCTGAC-----GAAcccagacaaataaaaaaacattaccAACCGCTATCTTATTATCCTCttccattctcctcctccccttaACCCCTGAAGTACTTACACTCTTTAACACATAAGAGACTTAGGTTAACACCAGACCAAGAGCCTTCAAAGCTCTCAGTGGAAGT-GAAAATCTT----TCAGTCCCTGATAAGACTTGCAAG-CCATTATCTCACATCTTCTGCATGCAAAACAGACACTTTAATTAAGCTAAAGCCTTAACTAGATAGACAGGCCTCGATCCTGCAAACTCTTAGTTAACAGCTAAGCGCCCAAAACCAACGAGCTTCCATCTAACTTTCCCCGCCTAGCAAAAGCAAAAGGCGGGGAAAGCCCCGGCAGACGTCAATCTGCTTCTTTAGATATGCAATCTAACATGTAA--CACCCCAGGGCTGATAGAAAGAGGACTTAAACCTCTGTATATGGG-------------GCTACAAACCACCGCTTAACCCTCAGCCATTCTACCTGTGGCAATCACA---CGCTGATTTTTCTCAACCAATCACAAAGATATCGGCACCCTATACCTAGTTTTTGGTGCCTGAGCCGGAATAGTAGGCACAGCACTAAGTCTTCTTATTCGGGCCGAACTCAGTCAACCCGGCGCACTCTTGGGCGATGACCAGATCTACAATGTAATCGTTACAGCCCATGCATTCGTAATGATTTTCTTTATAGTAATACCAATCATGATTGGAGGCTTTGGGAACTGATTAATCCCACTTATAATCGGAGCCCCAGACATGGCCTTCCCCCGAATGAACAACATAAGCTTCTGACTGCTT-CCCCCAtccttcctccttctgctcGCATCCTCTGGAGTAGAAGCCGGAGCGGGTACGGGCTGAACTGTTTACCCACCCCTAGCAGGAAATCTT-GCCCACGCAGGGGCTTCTGTAGACCTCACCATCTTCTCTCTTCATCTTGCAGGGGTCTCCTCTATTCTAGGGGCAATCAACTTCATCACAACCATCATTAACATGAAGCCCCCAGCAATCTCACAATACCAAACACCTCTTTTCGTGTGAGCCGTTTTAATTACTGCTGTACTTCTCCTGCTCTCCCTTCCAGTCCTTGCAGCAGGGATTACAATACTTCTCACTGACCGAAACCTAAATACAACCTTCTTTgacccagcaggaggaggagaccccATCTTGTACCAACACTTATTCTGATTCTTTGGACACCCTGAAGTCTACATTCTAATTCTCCCTGGCTTCGGAATAATTTCACACATCGTAGCCTACTACTCGGGCAAAAAAGAACCATTCGGCTACATGGGCATGGTCTGAGCCATAATGGCCATCGGTCTT-CTTGGTTTTATTGTATGAGCCCACCACATGTTTACAGTCGGCATGGACGTAGACACCCGAGCCTACTTTACCTCTGCCACAATAATTATTGCCATCCCGACAGGAGTCAAAGTATTTAGCTGACTTGCAACCTTGCATGGAGGATCAATTAAATGAGAAACCCCTATACTATGAGCCCTCGGCTTCATCTTCCTATTTACAGTGGGTGGCCTAACCGGAATTGTCCTAGCCAATTCATCCCTAGACATCGTATTACACGACACCTACTACGTAGTTGCCCATTTCCACTACGTCCTCTCCATGGGTGCTGTATTTGCAATTATGGGTGCATTCGTACACTGATTCCCACTATTTTCAGGATACACACTCCACAGCACTTGAACTAAAATCCACTTCGGAGTAATGTTCATTGGTGTCAACCTAACCTTCTTCCCTCAACACTTCCTTGGTCTAGCTGGAATACCTCGACGATACTCCGACTACCCCGACGCCTACGCCCTATGAAAC-TCCGTCTCCTCAATTGGCTCAATAGTCTCTCTAGTGGCAGTAATTATGTTCCTCTTTATCCTCTGAGAAGCCTTCACCGCTAAGCGAGAAGTCCAATCAGTTGAACTAACAATGACAAATGTAGAATGACTACACGGGTGCCCTCCTCCTTACCACACATTCGAAGAGCCCGCCTTTGTCCAAACTCAAACCTCTATCCGAGAAAGGGAGGAATCGAACCCCCGTAAACTGGTTTCAAGCCAGCTACAAAACCACTCTGTCACTTTCTTC-ATAAGACTCTAGTAAAATGGCAATTACACTACTTTGTCAAGGTAGAATTGTGGGTTAAACCCCCACGTGTCTTATTATTAATGGCACATCCTTCACAACTAGGGTTTCAAGATGCAGCTTCACCAGTAATAGAAGAACTCCTTCA-CTTCCACGACCATGCTCTAATAATCGTATTCCTTATTAGCACATTAGTACTTTACATTATTGTTGCTAT-AGTCTCCACCAAACTAACTAACAAGTACATTCT-AGACTCTCAAGAGATTGAAATTATCTGAACTATCCTACCAGCTATTATTCTTATCCTCATTGCCCTCCCTTCCCTCCGAATTCTTTACCTAATAGACGAAATCAACGACCCCCATCTAACAATTAAAGCTATAGGTCACCAATGATACTGAAGCTATGAATATACAGACTATAGCGACCTAGCCTTTGACTCATACATAGTCCCCACACAAGACCTGGCCCCCGGCCAATTCCGCCTTTTAGAAACTGACCATCGAATGGTCGTTCCAGTGGACTCCCCCATTCGAATCCTAGTCTCAGCAGAAGATGTCCTCCACTCCTGAGCCGTCCCCTCTCTAGGTGTAAAAATGGATGCCGTACCCGGCCGTCTAAACCAAACAGCCTTTATC-CTGTCCCGACCTGGTGTTTTCTACGGCCAATGCTCTGAAATCTGCGGAGCTAACCACAGCTTCATACCAATCGTTGTTGAAGCCGTCCCCCTAGAACACTTTGAAAACTGATCC------TCACTAATGCTCGAAGATACCTCACTA--------AGAAGC------TAAAACGGACACAGCGTTAGCCTTTTAAGCTAAAAATGGTGCCTACCAAACACC-CTT---AGTGAAATGCCTCAACT-----CAACC------CCGCACCTTGATT--CCTCATTATGGTCTT-CTCTTGATGTGTATTCCTAATCTTCCTCCCTCCAAAAATCATAGCTCACTTATTCCCAAATGAACCCTCCTCTCAAAACACTTGCCCCAAAGAAAtcaaa------ccctgaccct--gatc----atG-ACACTAAGCTTCTTCGACCAATTTCTTAG-CCCCACCGCCTTTGGTATTCCC-CTGATTGCCCTCGCTC-TCCTGTTACCTTGGACCCTCT-----TCCCCA-CACCAACCAAC-CGTTGAACCAACAATCGTCTTTTAACACTTCAAAGCCAATTTATTAATCGATTTA--CTC--AACAACTGCT--CCTCCCACTAAACATAGGAGGGCACAAATGAGGCCCTTATA-TTGCCTCATTAATAGTGTTCCTAATTACCATCAA-TA---TGCTAGGACTCCTTCCATACACATTCACCCCCACCACACAGCTTTCCGTAAATATAGCCCTAGCTGTACCCCTATGA-CTCGCAACAGTAATCATCGGAATACGAAACAACCCAACAGCAGCCCTAGGCCACCTTCTT-CCAGAAGGCACCCCCA-ACGCTCTAATCCCTATCCTAATTATTATCGAAACTGTCAGCCTCTTCATTCGACCTTTAGCACTAGGAGTTCGACTAACCGCTAACCTCACAGCAGGCCACCTGTTGATTCAACTAAT------CGCTAC---AGCTG---CTTTCGTACTCCTCCCCCTTATAC----CAACTGTCGCCATTCTGACATCAAC-------CCTATTATTCCTCCTGACACTTCTAGAAGTC---GCCGTCGAAATAATCCAAGCCTATGTTTTCGTACTTCTTCTAAGCCTCTATCTACAAGAAAACGTTTAATGGCCCATCAAGCACACCCATACCACATAGTAGACCCAAGCCCATGACCCCTAACAGGAGCAGTCGCTGCCCTTCTCCTTACATCCGGCCTAGCCATTTGATTCCACTTTAACTC---AACTATCCTAATAACCCTAGGACTAGT--CCTACTTTTACTCACAATACTTCAATGATGACGAGATATCGTACGAGAAGGCACATTCCAAGGCCACCACACCCCTCCTGTCCAAAAAGGCCTTCGATACGGAATAATTCTATTTATTACCTCCGAAGTATTCTTCTTCCTTGGCTTCTTCTGAGCATTCTACCACGCAAGCCTAGCCCCCACTCCTGAATTAGGAGGCTGCTGACCCCCTACAGGCATTATCCCCTTAAATCCCTTCGAAGTTCCCCTCCTAAACACAGCAGTCCTACTGGCATCAGGAGTTACCGTAACCTGAGCTCACCACAGCATTATAGAAGGTGAGCGAAAACAAGCAATCCAATCCCTCACCCTGACAATCCTTCTAGGTTTCTACTTTACATTCCTGCAAGCAATAGAGTACTATGAAGCCCCCTTCACAATCGCAGATGGTGTTTACGGCTCAACCTTCTTCGTCGCTACCGGCTTCCACGGCCTTCACGTCATCATCGGATCAACCTTCTTAGCCGTATGTCTGC-TACGACAAATCCGATTCCACTTCACCTCCGAACACCACTTTGGCTTCGAAGCAGCCGCCTGATACTGACACTTTGTAGATGTTGTCTGATTATTCTTATACATCTCAATCTACTGATGAGGCTCATAAATCTTTCTAGTATAAAGTCAGTACCTGTGACTTCCAATCACCCAGTCTTGGTTAAACTCCAAGGAAAGA-TAATGAACTTACTAACAACAATATTAATTATTACCACAGCT-TTATCCCT-CATCTTAATGACCGTCTCATTTTGACT-CCCCGCCCTTACACCAGACTACC---AAAAATTATCACCATATGAATGTGGCTTCGACCCCCTAGGGTCAGCCCGACTCCCCTTCTCACTACGCTTCTTCTTAGTCGCAATTCTGTTCCTCCTTTTCGACTTAGAAAtcgcccttctcctccccctcccttgaGGAGATCAGCTCCCATCCCCCACCCTAACACTTATA---TGGACCTCCGCCCTTCTAATTC----TCCTCACAATTGGCCTAGCCTACGAATGACTCCAAGGAGGCCTTGAATGAGCCGAATAGGTAATTAGTTTAATCAAAACATTTGATTTCGGCTCAAAAAACTATGGTTAAAGTCCATAATTAACCTGATGACCCTCA--TCCA--------ACTCT--CATTCACCTCAATCT-TCTTCCTAGGACTATTCGGCCTTGCATTTTACCGAGTC-CACCTTCTATCTGCACTCTTATGTCTTGAAAGCATAATATTAGCCCTATTC---CTCGC-ACTTTCAACATGAAGCCTGCAAATATCCTCCACCAGTTTTTCAGCC------GCGCC-GTTACTCCTTCTAGCATTCTCAGCATGCGAAGC--CGGTGTAGGACTAGCTTTAATAGTCGCCACAGCCCGTACCCACGGATCAGATCACCTACAAAACCTAAACCTCCTACAATGCTAAAAATCCTAATCCCAACCACTATACTTATCCTAGCAACATGA-TTGACACCCCCTAA-----ATGATTGTGGCCCTCTTCAC-TCCT-CAACAGCCTCCTAATT-GC-TC-TCACTAGCCTACTATGGCTAAA-AAACGCCTCTGAAACAGGGTGAACT-TTCCTCAACCCCTACTTAGCCACTGACCCACTATCAACCCCCCTTTTAATCCTCTCATGCTGACTCCTTCCTCTAATAATCCTAGCCAGCCAAAACCACACATCTCATGAACCAATTAACCGTCAACGAATGTATATCACACTTCTTGCCTCCCTGCAATTCTTCCTGATCCTTGCCTTCTCCGCCACAGAAATGATCATGTTTTACGTAATATTTGAAGCCACTCTAATCCCCACCCTGATCCTCATTACTCGCTGAGGAAACCAAGCAGAACGTCTTAACGCAGGTACATACTTCCTTTTCTATACCCTAGCAGGCTCTCTACCCCTCCTCATCGCACTA--CTACTCTTACAAAACTCTAATGGGTCCCTATCCCTCCTTATGCTC-C-CCCACTTGGGCCAACTTGAACTAACA---TCATATGCAGATAA---GATCTGGTGGGCAGGGTGTATCCTGGCATTCCTAGTTAAAATACCCCTTTACGGAGTTCACCTTTGACTACCCAAAGCTCACGTAGAAGCCCCCATTGCAGGATCTATAGTGCTAGCCGCTGTACTACTAAAACTAGGGGGCTACGGCATAATACGAATTTTAGTCACCCTAGACCCCTTAACCAAAGAACTCAG-CTACCCATTCATTGTCTTAGCCCTCTGAGGAGTGATTATAACTGGTTCCATCTGCATACGTCAAACAGACCTAAAATCATTAATTGCCTACTCATCAGTCAGCCACATAGGACTGGTAGTTGGAGGTATTCTCATCCAAACCCCCTGAGGATTCACCGGCGCGCTAATCCTCATAATTGCCCACGGATTAACATCATCCGCCTTATTCTGTCTAGCTAATACTAGCTACGAGCGCACACACAGCCGAACTATACTACTTGCTCGAGGTATGCAAATAATCCTCCCTCTCATAGCAGCCTGATGA-TTCATCGCAAGCCTCGCCAATTTAGCATTACCACCCCTC-CCCAACTTAATAGGAGAACT---AATGATTATTACCTC-----CCTATTCAATTGATCCCCGTGAACAATTGGCCTTACTGGACTAGGTACACTTATTACTGCCGGCTACTCGCTCTATATATTCCTCATAACCCAACGAGGGCCCGCCCCCAGCCACCTC-CTAGC-TC-TTGAACCCTCACACACCCGAG--AGCACCTTCTTAtcgccctccacc--tcctccca--ctaATCCTAATTATTACAAAACCAGAACTAATC-TGA--GGGTGAACTGCCTGTAGACATAGTTTAATCAAAACATTAGATTGTGATTCTAAAAACAGAGG-TTAAAACCCTCTTGTCCACCGAAAGAGGTTCGCAACAATGAAGACTGCTAATCTTCATCCCCCTCGGTTAAACTCCGGGGCTCATTCGACCCAGCTTTTGAAGGATAATAGCTAATCCGTTGGTCTTAGGAACCAAAAACTCTTGGTGCAACTCCAAGTAAAAG------CTATGCACTCCAC-----CC-CTCTAATTATAACATCTACCCTAATT---ATCATTTTTG-CACTACTC
p                              %%%&&&&&&&&,,,-------------------.MNPQQnnoooop~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{{~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~||||||||||||oooooooooooonnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnpqttttttttt~~~~~~~~~~~~~~~~~~~~~~~~~~~{{{uzzzzzzzzzzsssssssssssssssssssttttttttttttttttttttttttttt~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~pp~~~~~~~~~~~mmm~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~wwwwvvvvvvvvvvvvuuuuuuuuuuuuuuuuuttttteeeeeeeeeeeeeeeeeeeeeeeeeeeeddddddddddddddddefgiiiiijjjjjjjjjjmmooppprrrrrssttqtttttttttttt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gggfdbDDDDDDDDDDDDDDDDD@??????????>>>>>>>>>>>>>>>>=============================<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<>>>>>>>>>>>>>>>>>>????????????JJLLLLLLLLOOOOOOOOPWWXXXXXXXXXXXXXYYYYYYYYYYYYYYYYYYZZZZ__bbcemnnnnnnnn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~[}}}}}}}}}}}}}}}}}}}}}}sssssssssssssssssssssssssss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~w~~~~~~~~~||||{zooooommmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmnnnnnqqqqtuvwxyyy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggggg~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~pp~~~~~~~~mmm~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~jjj~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~UU~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~pp~~~~RRR~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~UU~~~~~~~jjjj~~~~~~~~~~~~~~~mm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pp~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~mm~~~~~~~~~~~~~~~~ggggg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~jjjj~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yyyyy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YYYYYYYYYYYYY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~jjj~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~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~~~~~~~~~~~~~~~~~~~~~w~w~~~~~~~~~~~~~~~~~~~~~~~~~~jjj~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~LLLLL~~~~~~~~~xxxxxwwwwwwwwwwwwwwwww~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~w~~s~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|uljEEEEEEEEEEEDDCBAAAAA@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@??????

a score=557 mismap=0.0138 acc=AG don=CT
s humanMito 11100 179 + 16571 AACTAATCATATTTTATATC---TTCTTCGAAACCACACTTATCCCCACCTTGGCTATCATCACCCGATGAGGCAAC--CAGCCAGA-ACGCCTGA-ACG-CAGGCACATACTTCCTAT-TCTACACCCTA--GTAGG--------CTCCCTTCCCCTACTCATCGCACT-AATTTACACTCACAACACCCTAGGC-TCA
s fuguMito  11972 187 + 16447 ATTTACCCAGTTTTAATAACCTTTTCCCCAAAACCACA--AAACCCAAACTGAGCACTTAT-TC---AAGTgaaaacagcagtaaaatacGCCTTCCTCGTCAGCCTCCTGCC-CCTATGCCTCCACCTTAATGAAGGAACTGAATCTATCATCACTAACTTAA---ACTGAATAAACACCCT---CACCTTTGACATCA
p                             ''''''''''''''''''''''''''''(*-1233333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333---------------------------------------------------------------''''&&

a score=13735 mismap=1e-10 acc=AG don=GT
s humanMito 12562 3498 + 16571 C-TCTCCCTAAGCTTCAAACTAGACTACTTCTCCATAATATTCATCCCTGTAGCATTGTTCGTTACATGGTCCATCATAGAATTCTCACTGTGATATATAAACTCAGACCCAAACATTAATCAGTTCTTCAAATATCTACTCATTTTCCTAATTACCATACTAATCTTAGTTACCGCTAACAACCTATTCCAACTGTTCATCGGCTGAGAGGGCGTAGGAATTATATCCTTCTTGCTCATCAGTTGATGATACGCCCGAGCAGATGCCAACACAGCAGCCATTCAAGCAGTCCTATACAACCGTATCGGCGATATCGGTTTCATCCTCGCCTTAGCATGATTTATCCTACACTCC--AACTCATGAGACCCACAACAAATAGCCCTT----CTAAACGC-TAATCCAAGCCTCACCCCACTACTAGGCCTcctcctagcagcagcagGCAAATCAGCCCAATTAGGTCTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCATCCGCTTCCACCCCCTAGCAGAAAATAGCCCACTAATCCAAACTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGCGCCCTTACACAAAATGACATCAAAAAAATCGTAGCCTTCTCCACTTCAAGTCAACTAGGACTCATAATAGTTACAATCGGCATCAACCAACCACACCTAGCATTCCTGCACATCTGTACCCACGCCTTCTTCAAAGCCATACTATTTATGTGCTCCGGGTCCATCATCCACAACCTTAACAATGAACAAGATATTCGAAAAATAGGAGG---ACTACTCAAAACCATACCTCTCACTTCAACCTCCCTCACCATTGGCAGCCTAGCATTAGCAGGAATACCTTTCCTCACAGGTTTCTACTCCAAAGACCACATCATCGAAACCGCAAACATATCATACACAAACGCCTGAGCCCTATCTATTACTCTCATCGCTACCTCCCTGACAAGC-GCCTATAGCACTCGAAT--AATTCTTCTCACCCTAACAGGTCAACCTCGCTTCCCCACCCTTACTAACATT-AACGAAAATAACCCCACCCTACTAAACCCCATTAAACGCCTGGCAGCCGGAAGCCTATTCGCAGG---ATTTCTCATTACTAACAACATTTCCC-CCGCATCCCCCTtccaaacaacaatccccCTCTACCTAAAACTCACAGCCCTCGCTGTCACTTTCCTAGGACTTCTAACAGCCCTAGACCTCAACTACC-TAACCAACA---AACTTAAAATAAAATCCCCA-CTATGCACATTTTATTTCTCCAACATACTCGGATTCTACCCTAGCATCACACACCGCACAATCCCCT--ATCTAGGC-CTTCTTACGAGCCAAAACCTGC--CCCTACTCCTCCTAGACCTAACCTGACTAGAAAAGCTATTACCTAAAACAATTTCA-CAGCACCAAATCTCCACCTCCATCATCACC-TC---AAC--CCAAAAAGGCATAATTAA-ACTTTACTTCCTCTCTTTct-tcttccc--actc-atcctaaccctactcctaaTCACATAAC--CT-----ATTCCCCCGAGCAATCTCAATTACAATATATACACCAACAAACAATGTTCAACCAGTAACCACTACTAATCAACGCCCATAATCATACAAAGCCCCCGCACCAATAGGATCCTCCCGAATCAACCCTGACC-CCTCTCCTTCATAAATTATTCAGCTTCCTACACTATTAAAGTTTACCACAaccaccaccccATCATA-CTCTTTCACCCACAGCACCAATCCTACCTCCA--TCGCTAACCCCACTAAAACACTCACC----AAGACCTCAACC-CCTGACCCCC-----ATGCCTCAGGATACTCCTCAATAGCCATCGCTGTAGTATATCCAAAGACAACCATCATTCCCCCTAAATAAATtaaaaa-aactattaaacCCATATAACCTCCCCCAAAATTCAGAATAATAACACACCCGACCACACCGCT-AACAATCAGTACTAA------ACCCCCATAAATAGGAGAAGGCTTAGAAGAAAACCCCACAAACCCCATTACTAAACCCACA-CTC----AACAG--AAACAAA-GCATACATCATT-ATTCTCGCACGGACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTACAAGAACACCAATGACC--CCAATACGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCTCCCCACCCCATCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCCAAATCACCACAGGACTATTCCTAGCCATACACTACTCACCAGACGCCTCAACCGCCTTTTCATCAATCGCCCACATCACTCGAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCCAATGGCGCCTCAATATTCTTTATCTGCCTCTTCCTACACATCGGGCGAGGCCTATATTACGGATCATTTCTCTACTCAGAAACCTGAAACATCGGCATTATCCTCCTGCTTGCAACTATAGCAACAGCCTTCATAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACAGTAATTACAAACTTACTATCCGCCATCCCATACATTGGGACAGAC-CTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACAGTCCCACCCTCACACGATTCTTTACCTTTCACTTCATcttacccttcaTTATTGCAGCCCTAGCAGCACTC-CACCTCCTA---TTCTTGCACGAAACGGGATCAAACAACCCCCTAGGAATCACCTCCCATTCCGATAAAATCACCTTCCACCCTTACTACACAATCAAAGACGCCCTCGGCTT-ACTTCTcttccttctct-ccttaatGACATTAACACTATTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCGAATGATATTTCCTATTCGCCTACACAATTCTCCGATCCGTCCCTAACAAACTAGGAGGCGTCCTTGCCCTA-TTACTATCCATCCTCATCCTAGCAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCACTTTATTGACTCCTAGCCGCAGACCTCCTCATTCTAACCTGAATCGGAGGACAACCAGT-AAGCTACCCTTTTACCATCATTGGACAAGTAGCATCCGTACTATACTTCACAACAATCCTaatcctaatacCAACTATCTCCCT--AATTGAAAACAAAATACTCAAATGGGCCTGTCCTTGTAGTATAAACTAATA-CACCAGTCTTGTAAACCGGA-GACG-------AAAACCTTTTTCC--AAGGACAAATCAGAGAAAAAGTCTTTAA-CTCCACCATTAGCACCCAAAGCTAAGATTCTAATTTAAACTATTCTCTGTTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAA
s fuguMito  12160 3491 + 16447 CATCAGCCTTAAATTC-GACT--CCTAC---TCAATTATCTTTACCCCAGTAGCACTATACGTAACCTGATCCATTTTAGAATTTGCATCCTGATACATACACTCAGACCCATTCATAAACCGATTCTTTAAATACCTTCTGGTCTTCCTAATTGCAATAATTATTCTTGTTACCGCCAATAACATATTTCAACTCTTCATCGGCTGAGAGGGGGTTGGTATCATATCATTCCTTCTTATCGGCTGATGATACGCACGAGCAGACGCTAATACAGCCGCCCTACAAGCAGTCATCTATAATCGAGTCGGAGACATTGGATTAATTATCGCTATAGCTTGA-ATAGCC-ACCCACCTAAACTCCTGAGAACTACAACAAATTTTCTTTTCCACTAAAAACATAGACATAACC-CT-CCCATTAGTTGCCCTGATCTTAGCCGCAACAGGCAAATCAGCCCAATTCGGCCTTCATCCGTGACTTCCTTCTGCAATAGAAGGTCCTACACCGGTCTCTGCCCTACTCCACTCCAGCACTATAGTTGTTGCAGGAATCTTCTTAATAATCCGCATCTCCCCCCTCTTAGAAACCAACCCAACAGCCCTCACACTCTGCCTATGCCTAGGAGCCCTAACCACCCTATTTACCGCCACCTGCGCCCTAACCCAGAACGATATCaaaaaaaTTGTAGCTTTTTCAACTTCCAGTCAACTAGGCCTAATGATAGTCACCATTGGCCTAAATCAGCCCCAACTTGCCTTCCTGCACATCTGCACCCACGCTTTTTTCAAAGCCATATTATTCTTATGCTCTGGGTCTATTATTCACAGCTTAAATGATGAACAAGACATCCGCAAAATGGGAGGGATACACCACTTGACC---CCTGTTACCTCTTCATGCCTAACAATTGGCAGCTTAGCCCTGACCGGAACCCCCTTCCTAGCCGGCTTCTTTTCCAAAGATGCCATCATCGAATCTTTAACCACCTCCCAATTAAACGCCTGAGCCCTATGCCTCACCCTCCTAGCAACTTCTTTCAC-AGCTATCTACAGCCTACGAGTCGTATTCTACGTATCC--ATAGGCCACCCTCGCTTTAATTCCCTTTC-ACCAATCAATGAAAATAACCCATCTGTAATTAACCCTATCAAACGACTGGCATGAGGCAGCATTATTGCTGGCCTATTAATCACCACAAAC--CTTCTCCCAACAAAAACACCTG--TAATATCAATACCTATAGTTGTTAAACTTACTGCTCTTATCGTCACAATCTTGGGACTCCTAATTGCCCTAGA-ATTAGCTTCCTTAACCTCCAAACAACTTAAACCTACA-CCACACCTGTCCCCCCACCACTTCTCAAACATACTTGGCTTCTTCCCAACAATTGTACACCGTGC-CTCTCCTAAAATTAATCTCATTTTAGGA-CAAACAATTGCTACCCAAATTATC---GACCTAACCTGACTAGAAAAAGTTGGACCCAAAACAATTTCATCT--ATCAACACTCC-CCT-CATCTCTACCATCAGTAACATCCAACAAGGATCAATCAAGACATAccttgtcctcttcctcacgACCCTTGCTCTATC--AACCCTCGTTCTTCTTACCTAACTGCTCGAAGAGCCCCCCGACCCAGCCCCCGCACCAGCTCTAATACTACAAGCAACGT-----CAATAACAAGACCCAGGC--CCCCAATAGTAATACT----CCCC-CACCGCTAGAATATATAAGTGA-AACCCCGTCCATATCACC-TCGAAAA----ACTGCATCTCAGTCTAT-----CTCTCCAGAA--ACC-CCTCATCACACCTC-TTCATC--AAGGACCATATTTGTGTACAAGataccaaaaacaaaaaaaaaatatccaaaaaagaataaaaccacCTGTCAACCTGTAGGCGCCTTAGGATCCTTATCTGCAGACAGCGCTGacgaataaataaacacaaccaGTATACCCCCCATATAAATCATTAACAAC-ACCAAAGACAAGAAAGTTCCCCC---GTGCAAAACTGAAGC---CCC-ACAGCAAAGAAGTGCAACCAGCACCAAATTGAAAACTCCATAAAAAGGAGCAGGATTTGTAGACAA---CACAAT---TATTAC--AACCAACATCcctaataaaagaaaaacaagcgcATAAAACATAGTTTCT-GCCAGGATTTTAACCAGGACCTATGGCGTGAAAAACCATCGTTGTTACTCAACTACAAAAACACTAATGGCCAGCC--TACGCAAAACCCACCCCCTACTAAAAATCGTAAACGACATAGTAATTGACCTTCCTACCCCCTCAAACATTTCCGCCTGATGAAACTTTGGCTCTCTACTCGGATTATGCCTTATTACACAAATCATCACAGGACTGTTCCTTGCAATACACTACACATCCGACATCTCTACCGCCTTTTCATCCGTAGCCCACATTTGCCGAGACGTAAACTACGGCTGACTAATTCGCAATCTACACGCAAACGGTGcctcattcttttttatttgcttaTACTCCCACATCGGCCGAGGTCTTTACTATGGCTCTTACCTAAGTAAAGAAACCTGAAACGTAGGGGTAGTCCTCTTACTTTTAGTAATGGCCACCGCTTTCGTAGGCTACGTTCTTCCATGAGGACAAATATCCTTCTGAGGCGCCACTGTAATTACAAACCTGCTCTCTGCTGTCCCCTACGTAGGAA-ACACGCTCGTTCAATGAGTATGAGGAGGCTTTTCAGTAGACAGCGCCACTCTAACACGATTCTTtgccttccacttcctcctcccatTTATCGTTGCAGCC---GCTGCCATCGtacatcttatttttctt-cacgAAACAGGCTCCAACAATCCCCTAGGACTCAATTCAAACGCAGACAAAATCCCATTCCACCCATACTTCTCTTACAAAGACCTCCTGGGCTTCACAA-TCATAC-TCTCAGCCCTCGCAACACTCGCCCTATTCTCTCCAAACTACCTCGGAGACCCTGACAACTTCACACCAGCCAATCCTCTAGTTACCCCCGCCCACATTAAACCAGAATGGTATTTCCTATTTGCATACGCAATTCTACGATCTATCCCCAATAAGCTAGGAGGTGTTCTGGCCCTTCTTGC-CTCAATCTTAATTCTTATAGTAGTTCCTTTCTTACACACCTCTAAACAACGAAGCCTAACATTCCGCCCACTATCACAATTCCTATTCTGAACCCTAATTGCCGACGTCGTCATCCTAACCTGAATTGGAGGCATGCCCGTCGAAC-ATCCTTACATTATTATCGGACAAATTGCCTCAGTACTTTACTTCTCTCTCTTCCTAATCTTGATGCCAA-TAGC-CGGTTGACTAGAAAATAAAATACTAAACT-AACAAGCATTAGTAGCTCAGATTCAGAGCGTCGGTCTTGTAAACCGAATGTCGGGGGTTAAAATCC---CCCCTTATGCTCAAA----AAGAAGGGACTTCAACCCCCACCACTGGCTCCCAAAGCCAGCATTCTTAATTAAACTACTTTTTGataatacat----------atatgtattatccccat
p                              ///////////////////////ABCCDDDDEHPSTTXXXYYZ[[]_ddfhij~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~jjj~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yxxxvvsvvvvvvvvvvvvvvvvvvvvvvw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~w~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wwwwwwwwwwwwwwwwwwwx~~~~~~~~~~~~~~~~~~ddddd~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~jjjj~~~~l~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~w~~~~~~~jjjj~~~~~~~~~~~~~~~~~LLLLL~~~~~~~~~~pp~~~w~~~~~~~~~~~~~~w~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~mmm~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~mmm~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mmm~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wwwwwwwwwwwwwmmmwwwwwwwwwwwwwwwOOOO~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|||{{wSSRRRRRRRRRIIED@@)&&&&%%%%%$$$$$$$$$$$$!!!!!!!!!!!!!!!

a score=486 mismap=0.798 acc=GA don=GT
s humanMito  2111 190 + 16571 ACAGCTCT-TTGGACACTAGGAAAAAACCTTGT--AGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGCCAC----CAATTA-AGAAAGCGTTCAA-GCTCAACACCCACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACACCCAATTGGAC-CAATCTATCACC---CTATAGAAGAACTAAT
s fuguMito  15651 179 + 16447 tcatatatattaaacattaatataatgcataattaaGACATAGTACTATATATT-CACCTATAGTT--CCTATAA-C--CCATAAAGCAAGTACAGGAagctaaaaatgctaaaagc--ataactggaaaaatccctaa----aaattgt-----tcaaa---aactgaacgaaatTTAAGACCGAACAATA----AACTCAT
p                             !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!

a score=117 mismap=0.839 acc=AG don=CC
s humanMito  2455 39 + 16571 GTTAAAAAAAGTAAAAGGAACTCGGCAAACCTTACCCCG
s fuguMito  15832 29 + 16447 GTTAAGATA--TACCAGG-ACTC----AAC---ACCCCG
p                            !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!

a score=751 mismap=1.48e-06 acc=AG don=GT
s humanMito  6049 315 + 16571 GTAACGACCACATCTACAACGTTATCGTCACAGCCCATGCATTTGTAATAATCTTCTTCATAGTAATACCCATCATAATCGGAGGCTTTGG-CAACTGAC--TAG----TTCCCCTAAtaaTCGGTGCCCCCGATATGGCGTT---TCCCCGCATAAACAACATAAGCTTCTGACTCTTACCTCCCTCTCTCCTACTCCTGCTCGCATCTGCT-ATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAAC-TACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTAC-----ACCTAGCAG
s fuguMito  15861 285 + 16447 TAAAATACCA-ATTATTAATGTAGTAAGAACCGACCAT-CAGTTG-----AT-TTCT------TAATGCATATTATTATTGAAGGTGAGGGACAA-TAACAGTGGGGGTTTCACTAAATGAACTATTCC-------TGGCATTTGGTTCCTACTTCAGGGCCATTA--ATC-GATTTATTCCTCATTCTTTCAT-CGAC-GCTGACATAAGTTGTTGGTGGAGTTC--------ATCAG--TG---AGATAATCC-CACAT-GCCGGG--CGTTCTCTC-CACAGGGGTCA-Ggttattttttctctctt-tcctttcaaTTGACATTTCAG
p                             """"""""""""""""""&&&&&&&&&&&&&''555666666999999999999999999999<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<=ZZZZZZZZZZZZZZZZZZZZZZZZZZZ[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[ZZ[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[[QQQQQQQQQQQQQQQQOOQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPLLLKKKKKKKKKKKKKKKKKKKKJIF<977777744444444

a score=564 mismap=0.000243 acc=AG don=GC
s humanMito    94 223 + 16571 ACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCT---TTGATTCCTGCCTCATTCTATTATTTATCGCACCTACGTTCAATATTACAGGCGAACATACCTACTAAAGTGTGTTAATta-attaaTGCT-TGTAGGACATAATAATAACAATTGAATGTCTGCA--CAGCCGCTTTCCACACAGACATCATAACAaaaaatttccac-caaacccccccctcccccc
s fuguMito  16146 196 + 16447 A-----GTGC---AGCGC-----GTCAATGGTTCA-TCAAGGTTGAA-CAT---TTTTTCT-TGGTTTATGGTA---ATGTTAATTAATGAATTAAGACAT---TATTTAAG------AATTACATTACTGATATCAAGGACATAA--ATAATAATACGAT-TCAACAATCATACAATTTCAcccccttcttctttttaaaaaaatt-aacgtataccccccctacccccc
p                             333333336?????@@@@@@@@@@@@@@@@@@@@@@@@@@@@AAAAAABBBBBBCCDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED@@:

a score=255 mismap=0.516 acc=AG
s humanMito  2030 114 + 16571 ATAGAATCTTAGTTCAA-CTTTAAATTTG-CCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGA-AAAAACCTTGTA
s fuguMito  16342 104 + 16447 ctaAAAAATAGGAGAGACCTTTAAGTTTGAACCA-AG----CTCT----CCActt----aattaaatattcatcatattattatcatatattataatattataataatataattata
p                             #####################################################################################################################