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diff test-data/cached_locally/ref.fasta @ 2:e3ba567abdf5 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/length_and_gc_content commit 7b6b07d22f3e6fed77b2c237de2b0d96fa939711"
author iuc
date Fri, 11 Mar 2022 14:08:11 +0000
parents f088370d2a3c
children
line wrap: on
line diff
--- a/test-data/cached_locally/ref.fasta	Sun Jan 28 04:04:58 2018 -0500
+++ b/test-data/cached_locally/ref.fasta	Fri Mar 11 14:08:11 2022 +0000
@@ -1,2 +1,173 @@
->1
-AAAAAAAAAATTTTTTTTTTCCCCCCCCCCGGGGGGGGGGAAAAAAAAAAAAAAAAAAAATTTTTTTTTTCCCCCCCCCCGGGGGGGGGGAAAAAAAAAATTTTT
\ No newline at end of file
+>fake_chr2 hg38_dna range=chr2:176116522-176125113 5'pad=0 3'pad=0 strand=+ repeatMasking=none
+TGGGGCGGGCTGGCCGAGCGAGCCCTGGAGAGGCGGACAGGAGGGCGGCG
+GAGAGCGCTGGGCCGGTTGTCTCCAGCGCGCACTATCGCGGGCGCGTAGT
+AGATGTCGCTGTTGTCCGTGCTTACCCGGCCGGCCGGCCAGGCTCTGGAG
+CACGTGACCCGAGAGGAGGCTGCGGCTCAAGGCCATTTTCAAATCTCATT
+GGCTTGGTTGTCATGTGGTCGGCAGAGGCATCCACAATTACACGGGGAAT
+GTTTTCCTAGAGATGTCAGCCTACAAAGGACACAATCTCTCTTCTTCAAA
+TTCTTCCCCAAAATGTCCTTTCCCAACAGCTCTCCTGCTGCTAATACTTT
+TTTAGTAGATTCCTTGATCAGTGCCTGCAGGAGTGACAGTTTTTATTCCA
+GCAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGGGGACCTAT
+GGAATGCAAACCTGTGGACTGCTCCCGTCTCTGGCCAAAAGAGAAGTGAA
+CCACCAAAATATGGGTATGAATGTGCATCCTTATATACCTCAAGTAGACA
+GTTGGACAGATCCGAACAGATCTTGTCGAATAGAGCAACCTGTTACACAG
+CAAGTCCCCACTTGCTCCTTCACCACCAACATTAAGGAAGAATCCAATTG
+CTGCATGTATTCTGATAAGCGCAACAAACTCATTTCGGCCGAGGTCCCTT
+CGTACCAGAGGCTGGTCCCTGAGTCTTGTCCCGTTGAGAACCCTGAGGTT
+CCCGTCCCTGGATATTTTAGACTGAGTCAGACCTACGCCACCGGGAAAAC
+CCAAGAGTACAATAATAGCCCCGAAGGCAGCTCCACTGTCATGCTCCAGC
+TCAACCCTCGTGGCGCGGCCAAGCCGCAGCTCTCCGCTGCCCAGCTGCAG
+ATGGAAAAGAAGATGAACGAGCCCGTGAGCGGCCAGGAGCCCACCAAAGT
+CTCCCAGGTGGAGAGCCCCGAGGCCAAAGGCGGCCTTCCCGAAGAGAGGA
+GCTGCCTGGCTGAGGTCTCCGTGTCCAGTCCCGAAGTGCAGGAGAAGGAA
+AGCAAAGGTCGGTATGAGCAGAGTTGCCACCCCAGCGGGGCGCGCAGCCC
+GGGAACCCGGCAGAGAGGGAGTGCCGGGGTGCCCAGCGCCGAGCCGGAGC
+CCGACTTGGCAGGTGCTGCTCCGCCTGGTTTTAGAGGGGTGATCTCAGCC
+CTGAGATAGTCCCCGCTTCTCCCCTGCTGCCCTGGCCCTCTCCGCCAGTC
+CTGGCCCCACGCTGATGGCGCCCGGGCAGAGGAAAAGCTTGCCGGTTTTA
+TTTTTCCTGAGCTAGACCTGAACACAACAAAAGAGCGCAAAGGAGACCTG
+CGGCTCATAAACACGACCACAGAGCCTCTTTTCTCCTGCTCAGATTTGCA
+GTTCCAGTTTTGCCTTGAGCCCAATGATCATGTTAAGGTGATCCAGGGCA
+CCGTGTTCGTGTTCAAGTGTATGCACCCCGCATCCTGCGAGCTTGGGGGT
+GGTGAGGGGAAAGAGATGGCTGGGCTGGTTGGTGCTTGAGTTGGGAAACA
+GGGCTTACTGCCTTTGCTGGGCTAGGTAACCTTGGCTTTGTTTAGGAAAA
+GTGCTGCAGTCTTTGCAATCCGTCGGCAAAGAGGGCAAAGGCGGAGGGGG
+AGAGTGGAACCCGCATTGCCCTCCCTGCAAGGCCAGCCTTAGGGCTGGGC
+TAAGGCAAAGAGCCAGGGATCTGGCTTTTTGAGAAGGAACCCTCCTCCTC
+TCCCCCAGTGCTTAGAGGTGGGCCACAGTAGGGGGCTCCCTTTCTGGGGG
+AATGCTTTAGTGTGGGGGCAAGAAGACATGAAAATTAAGGAAATTCTGGG
+GAATGCAACAATACCCAGGCAAGGTGGGGGAAGGTGTCTCGCTTCCCCAT
+TTATCTTTTGAAAGAGAATGGGCACCTATAAACCTGACTGTCAGGATTCC
+TGACTGCCTAGGAGAGGTGGGGAAGAAGTGGCAGATTTGGGGACCTGAGG
+CAGCAGTGGGGTTGGTAGGCTTGTCCAGGTCGTGGCGTATTCCCCTCCGT
+CCCTGTTAGGAGCTGAACCCTTAGAATGTTGCTGGGGAGATCTGGAAAGT
+TTACTATTCTACTAATGTTTTGTACAAGTGAGAAAGTTGAAAGAGAGAGC
+GAGAACCCAAATGCAGACTGTCCTGCCATCATGTCATTTAAGTAATGTGG
+CATCAATGTAAGATTCCCTTCCAAGGCCCACTTCATGTGAGTAATGTTTA
+ATACTAGCATTTTCCAAAGCGGCCTGGCTGCCAGCAGGGTCACGGCCAAG
+GGTACATTTGAACAGTCTGAAGAAAAAAACAAAAACGAAAACCAAAACCA
+AAACCAAAACAAAAACAAAAACAAAAACAAACAAACAAAAAACCTCTTGA
+TTTTTTTCTTCTTCTCCCTTTAATTTTGTTAGAGGAAATCAAGTCTGATA
+CACCAACCAGCAATTGGCTCACTGCAAAGAGTGGCAGAAAGAAGAGGTGC
+CCTTACACTAAGCACCAAACGCTGGAATTAGAAAAAGAGTTCTTGTTCAA
+TATGTACCTCACCCGCGAGCGCCGCCTAGAGATCAGTAAGAGCGTTAACC
+TCACCGACAGGCAGGTCAAGATTTGGTTTCAAAACCGCCGAATGAAACTC
+AAGAAGATGAGCCGAGAGAACCGGATCCGAGAACTGACCGCCAACCTCAC
+GTTTTCTTAGGTCTGAGGCCGGTCTGAGGCCGGTCAGAGGCCAGGATTGG
+AGAGGGGGCACCGCGTTCCAGGGCCCAGTGCTGGAGGACTGGGAAAGCGG
+AAACAAAACCTTCACCGCTCTTTGTTTGTTGTTTTGTTGTATTTTGTTTT
+CCTGCTAGAATGTGACTTTGGGGTCATTATGTTCGTGCTGCAAGTGATCT
+GTAATCCCTATGAGTATATATATATATATATATATATATATATAAAAACT
+TAGCACGTGTAATTTATTATTTTTTCATCGTAATGCAGGGTAACTATTAT
+TGCGCATTTTCATTTGGGTCTTAACTTATTGGAACTGTAGAGCATCCATC
+CATCCATCCATCCAGCAATGTGACTTTTTCATGTCTTTCCTAACACAAAA
+GGTCTATGTGTGTGGTTAGTCCATGAACTCATGGCATTTTGAATACATCC
+AGTACTTTAAAAATGACATATATATTTAAAAAAAAAAGATTAAGAAAACC
+CACAAGTTGGAGGGAGGGGGACTTAAAAAGCACATTACAATGTATCTTTT
+CACAAATGAATTTAGCAGTTGTCCTTGGTGAGATGGGATATTGGCGATTT
+ATGCCTTGTAGCCTTTCCCTTGTGGTGCATCTGTGGTTTGGTAGAAGTAC
+AACAGCAACCTGTCCTTTCTGTGCATGTTCTGGTCGCATGTATAATGCAA
+TAAACTCTGGAAATGAGTTCACTCCCTCTGCTTTCTGAAATGGAAATATG
+TTATGGTGGAAATGAAAGCCTATGGTGAGATTATCTTCTGGTTACACTCC
+CTGTTTGGGGCATTTGGGCAGGGGAGTGATAGACTAGTAGGGGAAGGGAG
+ATGGGGGAGAAAAGCTGGAGGAGGCCTAGGGTGTTGGATTTTGGCAGTGG
+TTGGGGGAGAGGAATTATAAGCTAGCTTGAGAGTGAAGTTTTCATAATTG
+GGAGGAAGGGGAGTCTCCTCTTTCCTTTCCCAGTCCCCAGTGATAGTAAC
+ATAATTGCGCTCTCAATGGGTGTGAGCTTTCCTCTGGCCTGAACCTGGTA
+AGTAAGCCTATACCCCAAGCCACTTTCTCCTCAAAGCTTCCCATTTGTGT
+GTTTTCTCCTCTTTGGTTTTGGTTGTGTTGTTTTTAATGCTTTCAGTGGC
+ATCTTGGTGATTTCTGGCTGGCGAGCAATCATCAGGGGCTAGGTTGAAGC
+TAGTCTTGCCCACCTGGAAGTTGCCGGCCTCCATTACAGGAGCAAGGACA
+AACAGCAGTGTAGCACTGCAGCGGATCCAATTCTGCCCCCTTTCCCTCAG
+CCCTACCCCCATCCCAAGCGCAAGACAGCCAGACCCCAGAGAAGCCGAGG
+ATGGGTGAGTTTTCCCATCCCACTTCGCCTTGATCTCCTTGTGGACGGGT
+TTTATGCTCAGTCATTACCTTTTAGTGGCCCACATGAAATTTTGTTAAAG
+GAAGAAATGAAAAGATTTTCCCCAGTCAGTCTTTCCTCTATTTAATTACA
+AAATGCTGGTGGGAACTGCTGCATCTGGGATGCAAGAAAATGCAGAAAGG
+GTGACTGAAAATTTTGCAAATGAACATGACTTCCCATGAAGTCTAATGTT
+CCATTCGCTGCCATGGTCCAGGGGACTCCCACCAGCTTCCACCGGCTTCA
+ACAGGATCTCCACTAGAGAGCCCAGACTTATCTAGTCCTGTCGGGGAAAA
+GGGAGAAGAGGCCTTGCAGGAGAAAGCTAACAGAAAATTCGTTACCTGAG
+GTCCTGCCTGCAGTTTCAAATAGCTTCCAGCAGTTTTACAAAACACATCC
+TTTCCATTTCTTCCTTTTAAATGTTTCCCTAAGAACGATCCATTTAGGTG
+CTATAAGTCCTCAGCCAGGGAGTCTCTGGGACACTGGCATTCAAAATTTT
+AAACTTCCGCCCCAAAACCAGGAACATTCCAAGACAGAACTCTTTTAGGG
+GGCCATTTCCTGGGGGTGGGGGAGAGGGCTTGGAATCAATGCTAGATTGA
+AAACGTTGTAATAGCTTTGCCCCAGACTTAACACCGGTTGGGCAGGAGGA
+GGGTAATTTTTATTTAGCCGTTTCTCCGATCATGTGGGGAATACCATTAG
+CTGTTGATAGCGGGCCATGTATCCGAGGAAAGCCTGAGCTACAAGGCAAA
+GGCATCCCATCTGGAACAAAATCAGAAAGCTATTGGCAAAGGTAATCAAT
+CAGGCCATAAATAGCCATTTACCCGCTTCCTTTTCGGGGCTGGAGGTGGG
+CCGGGAGCCCTCCAAGGGTGAGCTGGGCAACTTGTAGAGCAAGGAATATG
+CCCTCCGCTGCCGGCGCCCCGGCCGCTTTTGTCTGGGCTCCCAGCCGGGC
+TTCCGAGGCTTTGTACCATGGATTTGGGAGTGACAATGGGCATTTCCCTC
+AGATTCAAGGCTGCTCAACCTCACCTCTGTAGGGGGAAAAAAATCAGAAG
+GGAGTGTCCCAAGGACCTAGCCATTCGGCCGAATTTTTTAGACATTTTGG
+GAGTCTCCTCCGAGGCCTTTAAGTGCGAACCGCGCGAAGCGGCCCTGCCC
+GGGGAGACTCGCTGAGGCAGGGCTGAGGCGGCGGGCGGGAGCAAGCTGCT
+CTAGCATTTGGGTTCTGCCCTGTGGCGTGTTCTCTTCCAGGGCCTTTCCA
+GCATCATCGGAGAAGACGAAGCACCCTGGCCGCCACTGTCCGTGCTGCGC
+CAACTCGCCCGGCCGCCCGCCCTTCCGAGGGCAGGCAGAAGCCCCTCTGT
+GTCCTCCACCGCCGCGCCCCGGCTCGCCCCTCGGGCCGCGGCGTGTGCCC
+AGCCTCACGTCGGGGTGTGTGTGGCCGCGCGGGCGTGTGTGAGTGTGGCA
+GGGGGAGGGGGCCCTCCGATCTGCTCCATCCGTCCGTTTTATTAGGGACA
+CATTAATCTATAATCAAATACACCTCATAAAATTTTTATTGAAAGGCATA
+ATATCATTACAGAGGTCTTCCACCTGTTTTAAACAACACGACAAGCTGTG
+AGCAAGCGTGTGTGTGGGGATGTGTGGGGAGGGGTGGGTGTGAGTAGGGA
+GAGAGGCGAGGGGAGAACAGCTCCCCTCGGGCGCTAGGGGCCGCCCCGAG
+GGCCCGCCTGCCTCGGGCGACACCGGCCTGGCGCCCCCGCGGCCGCTCCG
+TGTGCCCTGGACTCGCCGCCCGCGGCTCGGAAGCTGGAGAGTCAGCGACG
+GGGCCCGACTGCGGGACCGAGGGCTGCAAGAAGAAGCGAACAAATAGTCC
+CCAGCGCCTCCTCTGGATGCGGTCGCGTCTGTGGTCCTGGCAGCCGCTGG
+GCGGGCCAGGCCAGGTCGGGCCGGGCCGAGCCGGGCACATGGACCTGGGC
+CTGCGGGCTCTAATTGCGGCGCTTATGTTGATGATTTTTTTTTTAATCAC
+AGCAGCCCCCAGTTTAGCGGACTGATTTACTCCCGGTATTGGTAAATATG
+ATCACGTGGGCCGCGCGACCAATGGTGGAGGCTGCAGCCTGCGAACTAGT
+CGGTGGCTCGGGCGCCGGCGGGGAGCTGCTCGGCGGCGGACAGTGTAATG
+TTGGGTGGGAGTGCGGGACGCCTCAAAATGTCTTCCAGTGGCACCCTCAG
+CAACTACTACGTGGACTCGCTTATAGGCCATGAGGGCGACGAGGTGTTCG
+CGGCGCGCTTCGGGCCGCCGGGGCCAGGCGCGCAGGGCCGGCCTGCAGGT
+GTGGCTGATGGCCCGGCCGCCACCGCCGCCGAGTTCGCCTCGTGTAGTTT
+TGCCCCCAGATCGGCCGTGTTCTCTGCCTCGTGGTCCGCGGTGCCCTCCC
+AGCCCCCGGCAGCGGCGGCGATGAGCGGCCTCTACCACCCGTACGTTCCC
+CCGCCGCCCCTGGCCGCCTCTGCCTCCGAGCCCGGCCGCTACGTGCGCTC
+CTGGATGGAGCCGCTGCCCGGCTTCCCGGGCGGTGCGGGCGGTGGCGGTG
+GTGGTGGAGGCGGCGGTCCGGGCCGCGGTCCCAGCCCTGGCCCCAGCGGC
+CCAGCCAACGGGCGCCACTACGGGATTAAGCCTGAAACCCGAGCGGCCCC
+GGCCCCCGCCACGGCCGCCTCCACCACCTCCTCCTCCTCCACTTCCTTAT
+CCTCCTCCTCCAAACGGACTGAGTGCTCCGTGGCCCGGGAGTCCCAGGGG
+AGCAGCGGCCCCGAGTTCTCGTGCAACTCGTTCCTGCAGGAGAAGGCGGC
+AGCGGCGACGGGGGGAACCGGGCCTGGGGCAGGGATCGGGGCCGCGACTG
+GGACGGGCGGCTCGTCGGAGCCCTCAGCTTGCAGCGACCACCCGATCCCA
+GGCTGTTCGCTGAAGGAGGAGGAGAAGCAGCATTCGCAGCCGCAGCAGCA
+GCAACTTGACCCAAGTAAGTGCAAAAGAAATTGCCCCCTGATTTATTGCT
+GAAACCTGTAAGGCTCGAATGTGCAAAACTGATAGTTTTACTAACCTATA
+AAAACGTCTAGACGCCTACCCAAGCCTAGGCGAACAACATGCATCCATAA
+AAAGAGCTTCCCATAACCACCTACCCTGGGCGCTCAGTTAGTACGGTAAA
+CAGAGCGCGAGCATTAAGGCTTTTTATGATAATTCCCCACAAGTTGTGAA
+AAGCGACCATCCTTGGTGAAATTAATTTAACGACCTCTCTTCCCCACCCT
+GTGGTCTCTCCCTGCCTCCCCTCCTCTCCTCTCTCCCCGTCTCCAAACCT
+CCCTCTTTGTAGACAACCCCGCCGCGAACTGGATCCACGCTCGCTCCACC
+CGGAAAAAGCGCTGTCCCTACACCAAATACCAGACGCTTGAGCTGGAGAA
+AGAATTCCTCTTCAACATGTACCTCACCCGGGACCGGCGCTACGAGGTGG
+CCAGGATTCTCAACCTAACAGAGAGACAGGTCAAAATCTGGTTTCAGAAC
+CGTAGGATGAAAATGAAAAAGATGAGCAAGGAGAAATGCCCCAAAGGAGA
+CTGACCCGGCGCGGTGCTGGCGGGAGCGCTCAAGGGCAGCGGATTTGTTG
+TTGTTGCTGTTTTCCTTTGTGGGTGTTTGGTGCTTGATTTCCAGAAACTC
+TCCAGCGACTTGGACTTCTTCTTCTTTTTTTTTTTCTTTTTAGATAGAAG
+TGACTGTGTGGTTGGTCTCTGAGGTATTTGGGGGACTCTGTATTTGCTCG
+TTTACGTGTTGGAAAAACCAAGTGGCTTTGGGGTTTCGCCCTATCCCACT
+CCCTCTCTTTCCTGCTCCATTGGTTCCTTAAGAAATGCTATATTTTGTGA
+GTGCAAGCTGGCTTGGGGAGCCCTCTCTTGTGTAAATGTCCCCCATGTTT
+CTGAAAAGTGCTGTAGTTTAGTCCCCTCACCCCCAGCACTGCCCAAACAG
+GGGCCAAGTGCGCCCCAATTCCAAGAATGAAGGCAGAGCGACAACAGTGC
+GGACACCCCGGCTGCTAGCCCACGGTGAAGCCCGGCGGGGTTGCCCACCA
+GTTGCGAAAGCCCCCTTTCCTCAGGGAGCACGCGGGACCTCGGTGGAGAT
+CTCCAGTGAGGCTTAGAGGAGCCCAGGGCCTCGGGCGGGTTGGGGTTTGT
+CCTCAGTGCATTGGACGCGCTGCTCTCTCCCCTGAAGGCTGGGCTCGCGT
+GGGCGGCCGCGGGTGGTGGCCCTCCCGGTTCCTGCCCGAGGACCAGTTGT
+AAATGTTACTGCTTCCTACTAATAAATGCTGACCTGATCAAATGGAGCCC
+AGACGCTGGCCCTAAACATTGTGTGCCTGCTTTCTCTGCCTCTCTGCAAA
+ATATCACACTCAGGATATTTCTCCTCTACCCCTGGGAGTGAGACATTGTT
+AAAAATTCAGGGCCCTTCCACCTGACAGATCTCTCTGATGTGTCTCTGCC
+TTCTCTGCCTCACATCCCTTTGTGTAGGCAGATGCAGCAGCA