Mercurial > repos > iuc > limma_voom

diff limma_voom.xml @ 20:0921444c832d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/limma_voom commit 0cc16fe170b5c8d3b9441177bf2749aa7bddca7b
author iuc
date Wed, 29 May 2019 10:31:41 -0400
parents c9c6427edfe9
children 58c35179ebf0
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--- a/limma_voom.xml	Tue May 28 10:04:10 2019 -0400
+++ b/limma_voom.xml	Wed May 29 10:31:41 2019 -0400
@@ -721,7 +721,7 @@
             <param name="cinfo" value="contrasts.txt" />
             <param name="normalisationOption" value="TMM" />
             <param name="topgenes" value="6" />
-            <output_collection name="outTables" count="2">
+            <output_collection name="outTables" count="3">
                 <element name="limma-voom_Mut-WT" ftype="tabular" >
                     <assert_contents>
                         <has_text_matching expression="GeneID.*logFC.*AveExpr.*t.*P.Value.*adj.P.Val.*B" />
@@ -734,6 +734,12 @@
                         <has_text_matching expression="11304.*-0.4573" />
                     </assert_contents>
                 </element>
+                <element name="limma-voom_Mut-WT-WT-Mut" ftype="tabular" >
+                     <assert_contents>
+                        <has_text_matching expression="GeneID.*logFC.*AveExpr.*t.*P.Value.*adj.P.Val.*B" />
+                        <has_text_matching expression="11304.*0.9146" />
+                    </assert_contents>
+                </element>
             </output_collection>
         </test>
     </tests>