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comparison lineagespot_wrapper.xml @ 1:99494998688a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 6a6a37f2574954dae65f9ec407fe38594ed37659
author iuc
date Sun, 25 Feb 2024 09:49:20 +0000
parents 6ddf5a9ce4a5
children
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0:6ddf5a9ce4a5 1:99494998688a
1 <tool id="lineagespot" name="lineagespot" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.09"> 1 <tool id="lineagespot" name="lineagespot" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.09">
2 <description>identifies SARS-CoV-2 lineages contributing to metagenomic samples from per-sample variant files</description> 2 <description>identifies SARS-CoV-2 lineages contributing to metagenomic samples from per-sample variant files</description>
3 <macros> 3 <macros>
4 <token name="@TOOL_VERSION@">1.4.0</token> 4 <token name="@TOOL_VERSION@">1.6.0</token>
5 <token name="@VERSION_SUFFIX@">0</token> 5 <token name="@VERSION_SUFFIX@">0</token>
6 </macros> 6 </macros>
7 <xrefs> 7 <xrefs>
8 <xref type="bio.tools">lineagespot</xref> 8 <xref type="bio.tools">lineagespot</xref>
9 <xref type="bioconductor">lineagespot</xref> 9 <xref type="bioconductor">lineagespot</xref>
10 </xrefs> 10 </xrefs>
11 <requirements> 11 <requirements>
12 <requirement type="package" version="4.3.1">r-base</requirement> 12 <requirement type="package" version="4.3.1">r-base</requirement>
13 <requirement type="package" version="1.20.3">r-getopt</requirement> 13 <requirement type="package" version="1.20.4">r-getopt</requirement>
14 <requirement type="package" version="@TOOL_VERSION@">bioconductor-lineagespot</requirement> 14 <requirement type="package" version="@TOOL_VERSION@">bioconductor-lineagespot</requirement>
15 <requirement type="package" version="3.11">python</requirement> 15 <requirement type="package" version="3.11">python</requirement>
16 </requirements> 16 </requirements>
17 <command detect_errors="exit_code"><![CDATA[ 17 <command detect_errors="exit_code"><![CDATA[
18 ## Prepare lineage definitions 18 ## Prepare lineage definitions