Mercurial > repos > iuc > lofreq_indelqual

changeset 6:971e07ca4456 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lofreq commit 3751719cd03b8380954e2231cf91496c863056e2
author iuc
date Wed, 06 Jul 2022 09:26:48 +0000
parents 426d707dfc47
children
files lofreq_indelqual.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/lofreq_indelqual.xml	Mon Oct 05 20:14:23 2020 +0000
+++ b/lofreq_indelqual.xml	Wed Jul 06 09:26:48 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="lofreq_indelqual" name="Insert indel qualities" version="@TOOL_VERSION@+galaxy0" profile="18.01">
+<tool id="lofreq_indelqual" name="Insert indel qualities" version="@TOOL_VERSION@+galaxy1" profile="18.01">
     <description>into a BAM file</description>
     <macros>
         <import>macros.xml</import>
@@ -47,20 +47,20 @@
             <param name="selector" value="uniform" />
             <param name="insertions" value="20" />
             <param name="deletions" value="30" />
-            <output name="output" file="indelqual-out1.bam" />
+            <output name="output" file="indelqual-out1.bam" ftype="bam" />
         </test>
         <test>
             <param name="reads" ftype="bam" value="lofreq-in1.bam" />
             <param name="selector" value="dindel" />
             <param name="ref_selector" value="history" />
             <param name="ref" ftype="fasta" value="pBR322.fa" />
-            <output name="output" file="indelqual-out2.bam" />
+            <output name="output" file="indelqual-out2.bam" ftype="bam" />
         </test>
         <test>
             <param name="reads" ftype="bam" value="lofreq-in1.bam" />
             <param name="selector" value="uniform" />
             <param name="insertions" value="20" />
-            <output name="output" file="indelqual-out3.bam" />
+            <output name="output" file="indelqual-out3.bam" ftype="bam" />
         </test>
     </tests>
     <help><![CDATA[