Mercurial > repos > iuc > maf_stats

annotate test-data/local/maf_indexes.loc @ 2:87c1c223c704 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit 1317f57940166a6326eea430443918f85b60bd95
author iuc
date Wed, 25 Oct 2023 07:38:28 +0000
parents 5a92f4c476b5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
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1 #This is a sample file distributed with Galaxy that is used by some
5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
parents:
diff changeset
2 #alignment tools. The maf_index.loc file has this format (white space
5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
parents:
diff changeset
3 #characters are TAB characters):
5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
parents:
diff changeset
4 #
5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
parents:
diff changeset
5 #<Display_name UID> <indexed_for:build1,build2,build3> <exists_in_maf:build1,build2,build3> <Comma_Separated_List_of_Full_Paths_To_Files>
5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
parents:
diff changeset
6 #
5a92f4c476b5 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interval2maf/ commit f7b04f8c6edca90b1e9bc867a1569996aec76d7a"
iuc
parents:
diff changeset
7 Test TEST hg38,eulFla1,mm10 hg38,eulFla1,mm10 ${__HERE__}/interval2maf-in1-1.maf,${__HERE__}/interval2maf-in1-2.maf