Mercurial > repos > iuc > mageck_gsea

diff mageck_macros.xml @ 0:d95eae71878e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mageck commit 71cef018eec5ee7ff7f3853599c027e80e2637fe
author iuc
date Wed, 14 Feb 2018 06:41:59 -0500
parents
children 82a180e6b582
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/mageck_macros.xml	Wed Feb 14 06:41:59 2018 -0500
@@ -0,0 +1,27 @@
+<?xml version="1.0"?>
+<macros>
+    <token name="@VERSION@">0.5.7</token>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="@VERSION@">mageck</requirement>
+            <!-- needed for pdf report outputs -->
+            <requirement type="package" version="3.0.1">r-gplots</requirement>
+            <requirement type="package" version="1.8_2">r-xtable</requirement>
+            <yield/>
+        </requirements>
+    </xml>
+    <xml name="version">
+        <version_command>mageck -v </version_command>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="doi">10.1186/s13059-014-0554-4</citation>
+        </citations>
+    </xml>
+    <xml name="sort_criteria">
+        <param name="sort_criteria" argument="--sort-criteria" type="select" label="Sorting criteria">
+            <option value="neg" selected="True">Negative selection</option>
+            <option value="pos">positive selection</option>
+        </param>
+      </xml>
+</macros>