Mercurial > repos > iuc > malt_run

view test-data/alignments_output1.sam @ 0:d505990b8c89 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/malt commit 04aaa266f5b2e557f42c7feca4e081c7e9c1dae6"
author iuc
date Fri, 12 Nov 2021 18:39:23 +0000
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@HD	VN:1.5	SO:unsorted	GO:query
@PG	ID:1	PN:MALT	CL:--mode BlastN --matchScore 2 --mismatchScore -3 --setLambda 0.625 --setK 0.41 --alignmentType Local --inFile input_fastq_gz.fastq.gz --index
@RG	ID:1	PL:unknown	SM:unknown
@CO	BlastN-like alignments
@CO	Reporting AS: bitScore, ZR: rawScore, ZE: expected, ZI: percent identity, ZL: reference length