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comparison map_damage.xml @ 1:761b6fdcac6e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 1fc6a1ce5483f15ea5366a534529025781311200
author iuc
date Wed, 16 Jul 2025 08:09:11 +0000
parents 3db999d4e0c1
children 0287e2f82b64
comparison
equal deleted inserted replaced
0:3db999d4e0c1 1:761b6fdcac6e
141 <option value="p">Percentage of reads</option> 141 <option value="p">Percentage of reads</option>
142 <option value="n">Number of reads</option> 142 <option value="n">Number of reads</option>
143 </param> 143 </param>
144 <when value="no_downsampling"/> 144 <when value="no_downsampling"/>
145 <when value="p"> 145 <when value="p">
146 <param argument="--downsample" type="float" min="0" max="1" label="Percentage of reads to sample" help="Must be between 0 and 1 (0 and 1 not included)"> 146 <param argument="--downsample" type="float" min="0" max="1" value="0.8" label="Percentage of reads to sample" help="Must be between 0 and 1 (0 and 1 not included)">
147 <validator type="in_range" min="0" exclude_min="true" max="1" exclude_max="true" message="Percentage of reads to downsample must be > 0 and &lt; 1"/> 147 <validator type="in_range" min="0" exclude_min="true" max="1" exclude_max="true" message="Percentage of reads to downsample must be > 0 and &lt; 1"/>
148 </param> 148 </param>
149 <param argument="--downsample-seed" type="integer" optional="true" label="Downsampling seed" help="Seed (integer) used to randomly select reads for downsampling. Useful for reproducibility."/> 149 <param argument="--downsample-seed" type="integer" optional="true" label="Downsampling seed" help="Seed (integer) used to randomly select reads for downsampling. Useful for reproducibility."/>
150 </when> 150 </when>
151 <when value="n"> 151 <when value="n">
152 <param argument="--downsample" type="integer" min="1" label="Number of reads to sample" help="Must be superior or equal to 1"/> 152 <param argument="--downsample" type="integer" min="1" value="1000" label="Number of reads to sample" help="Must be superior or equal to 1"/>
153 <param argument="--downsample-seed" type="integer" optional="true" label="Downsampling seed" help="Seed (integer) used to randomly select reads for downsampling. Useful for reproducibility."/> 153 <param argument="--downsample-seed" type="integer" optional="true" label="Downsampling seed" help="Seed (integer) used to randomly select reads for downsampling. Useful for reproducibility."/>
154 </when> 154 </when>
155 </conditional> 155 </conditional>
156 156
157 </section> 157 </section>