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comparison masigpro.xml @ 4:402e0b9cfd87 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/masigpro commit 7dc16d5d4169a8fbfb3fad3b2212fd8b6d481f5f"
author iuc
date Sat, 27 Nov 2021 09:58:07 +0000
parents 83f8b5ceff43
children
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3:83f8b5ceff43 4:402e0b9cfd87
1 <tool id="masigpro" name="maSigPro" version="1.49.3.1+galaxy1"> 1 <!-- TODO remove .1 in tool version with next update -->
2 <tool id="masigpro" name="maSigPro" version="@TOOL_VERSION@.1+galaxy@VERSION_SUFFIX@">
2 <description>Significant Gene Expression Profile Differences in Time Course Gene Expression Data</description> 3 <description>Significant Gene Expression Profile Differences in Time Course Gene Expression Data</description>
4 <macros>
5 <token name="@TOOL_VERSION@">1.49.3</token>
6 <token name="@VERSION_SUFFIX@">0</token>
7 </macros>
8 <xrefs>
9 <xref type="bio.tools">masigpro</xref>
10 </xrefs>
3 <requirements> 11 <requirements>
4 <requirement type="package" version="8.25">coreutils</requirement> 12 <requirement type="package" version="8.25">coreutils</requirement>
5 <requirement type="package" version="1.49.3">bioconductor-masigpro</requirement> 13 <requirement type="package" version="@TOOL_VERSION@">bioconductor-masigpro</requirement>
6 <requirement type="package" version="1.3.2">r-optparse</requirement> 14 <requirement type="package" version="1.3.2">r-optparse</requirement>
7 <requirement type="package" version="4.4">sed</requirement> 15 <requirement type="package" version="4.4">sed</requirement>
8 </requirements> 16 </requirements>
9 <stdio> 17 <stdio>
10 <regex match="Execution halted" 18 <regex match="Execution halted"
383 </repeat> 391 </repeat>
384 <repeat name="rep_time"> 392 <repeat name="rep_time">
385 <param name="time" value="3" /> 393 <param name="time" value="3" />
386 <param name="files" value="control_3H.counts,treat_3H_1.counts,treat_3H_2.counts" /> 394 <param name="files" value="control_3H.counts,treat_3H_1.counts,treat_3H_2.counts" />
387 </repeat> 395 </repeat>
388 <param name="replicates_selector" value="advanced" />
389 <repeat name="rep_repl"> 396 <repeat name="rep_repl">
390 <param name="files" value="treat_3H_1.counts,treat_3H_2.counts" /> 397 <param name="files" value="treat_3H_1.counts,treat_3H_2.counts" />
391 </repeat> 398 </repeat>
392 <repeat name="rep_groups"> 399 <repeat name="rep_groups">
393 <param name="name" value="Control" /> 400 <param name="name" value="Control" />