# HG changeset patch # User iuc # Date 1614111268 0 # Node ID eb1f4ba66dc66d18887b5b9b9e8a124c71f49565 # Parent 6ca28e6144fab8bfcf3c9bb9902b981b20f547a7 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit e0684fe95538cf97b1199ad1072d3da6d1619443" diff -r 6ca28e6144fa -r eb1f4ba66dc6 convert_VCF_info_fields.py --- a/convert_VCF_info_fields.py Mon Feb 22 19:59:42 2021 +0000 +++ b/convert_VCF_info_fields.py Tue Feb 23 20:14:28 2021 +0000 @@ -86,7 +86,7 @@ if dpsp == 0: info.append("AF=NaN") else: - af = dp4[2] + dp4[3] / dpsp + af = (dp4[2] + dp4[3]) / dpsp info.append("AF=%.6f" % (af)) if dpspf == 0: info.append("FAF=NaN")