Mercurial > repos > iuc > medaka_consensus_pipeline

comparison medaka_consensus.xml @ 15:79e9a869f40e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit 4d3dfd4bcb567178107dcfd808ff03f9fec0bdbd
author iuc
date Wed, 12 Oct 2022 07:44:40 +0000
parents cb34f00cc10f
children
comparison
equal deleted inserted replaced
14:cb34f00cc10f 15:79e9a869f40e
65 <has_text_matching expression=".+GTCAGAATCGCGTTCAGCGCGTTTCAGCGGTGCGTACAATT.+"/> 65 <has_text_matching expression=".+GTCAGAATCGCGTTCAGCGCGTTTCAGCGGTGCGTACAATT.+"/>
66 </assert_contents> 66 </assert_contents>
67 </output> 67 </output>
68 <output name="out_probs"> 68 <output name="out_probs">
69 <assert_contents> 69 <assert_contents>
70 <has_size value="165503" delta="100"/> 70 <has_size value="169146" delta="100"/>
71 </assert_contents> 71 </assert_contents>
72 </output> 72 </output>
73 <output name="out_calls"> 73 <output name="out_calls">
74 <assert_contents> 74 <assert_contents>
75 <has_size value="343341" delta="100"/> 75 <has_size value="351188" delta="100"/>
76 </assert_contents> 76 </assert_contents>
77 </output> 77 </output>
78 </test> 78 </test>
79 <!-- #2 --> 79 <!-- #2 -->
80 <test expect_num_outputs="5"> 80 <test expect_num_outputs="5">
89 <has_line line=">4"/> <!-- Replace test --> 89 <has_line line=">4"/> <!-- Replace test -->
90 </assert_contents> 90 </assert_contents>
91 </output> 91 </output>
92 <output name="out_probs"> 92 <output name="out_probs">
93 <assert_contents> 93 <assert_contents>
94 <has_size value="166251" delta="100"/> 94 <has_size value="169863" delta="100"/>
95 </assert_contents> 95 </assert_contents>
96 </output> 96 </output>
97 <output name="out_calls"> 97 <output name="out_calls">
98 <assert_contents> 98 <assert_contents>
99 <has_size value="343340" delta="100"/> 99 <has_size value="351188" delta="100"/>
100 </assert_contents> 100 </assert_contents>
101 </output> 101 </output>
102 <output name="out_log"> 102 <output name="out_log">
103 <assert_contents> 103 <assert_contents>
104 <has_line line="Polished assembly written to results/consensus.fasta, have a nice day."/> 104 <has_line line="Polished assembly written to results/consensus.fasta, have a nice day."/>