# HG changeset patch
# User iuc
# Date 1599554061 0
# Node ID 7518ee87b53d04113c79321bc53eafcc4c70bc8b
# Parent  de387b2b28030cc65301d8228c13045c0e01f4e2
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/megahit commit 4277f95c11b67fae2007521af6473af5d09b7f1f"

diff -r de387b2b2803 -r 7518ee87b53d megahit_wrapper.xml
--- a/megahit_wrapper.xml	Mon Feb 18 12:14:46 2019 -0500
+++ b/megahit_wrapper.xml	Tue Sep 08 08:34:21 2020 +0000
@@ -1,5 +1,5 @@
 <?xml version='1.0' encoding='utf-8'?>
-<tool id="megahit" name="MEGAHIT" version="@VERSION@.4">
+<tool id="megahit" name="MEGAHIT" version="@VERSION@.5">
     <description>for metagenomics assembly</description>
     <macros>
         <token name="@VERSION@">1.1.3</token>
@@ -10,6 +10,7 @@
     <version_command>megahit --version</version_command>
     <command detect_errors="exit_code"><![CDATA[
 megahit
+    --num-cpu-threads \${GALAXY_SLOTS:-4}
     #if $input_option.choice == 'paired'
         -1 '${input_option.fastq_input1}'
         -2 '${input_option.fastq_input2}'
@@ -184,4 +185,4 @@
     <citations>
         <citation type="doi">10.1093/bioinformatics/btv033</citation>
     </citations>
-</tool>
\ No newline at end of file
+</tool>