Mercurial > repos > iuc > megan_blast2rma

comparison blast2rma.xml @ 4:45fd617493eb draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/megan commit 6b0c3dbd5bdf9c272cf32f39e0004d504f953ff0
author iuc
date Sat, 27 Aug 2022 17:05:44 +0000
parents d326b943f5e2
children
comparison
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3:d326b943f5e2 4:45fd617493eb
149 <param name="read1" value="13-1941-6_S4_L001_R1_600000.fastq.gz" ftype="fastqsanger.gz"/> 149 <param name="read1" value="13-1941-6_S4_L001_R1_600000.fastq.gz" ftype="fastqsanger.gz"/>
150 <param name="blast1" value="blast_R1.txt" ftype="txt"/> 150 <param name="blast1" value="blast_R1.txt" ftype="txt"/>
151 <param name="blastMode" value="BlastN"/> 151 <param name="blastMode" value="BlastN"/>
152 <output name="rma6_output" ftype="rma6"> 152 <output name="rma6_output" ftype="rma6">
153 <assert_contents> 153 <assert_contents>
154 <has_size value="19596"/> 154 <has_size value="19596" delta="25"/>
155 </assert_contents> 155 </assert_contents>
156 </output> 156 </output>
157 </test> 157 </test>
158 <!-- Single dataset input, contaminants file --> 158 <!-- Single dataset input, contaminants file -->
159 <test expect_num_outputs="1"> 159 <test expect_num_outputs="1">
161 <param name="blast1" value="blast_R1.txt" ftype="txt"/> 161 <param name="blast1" value="blast_R1.txt" ftype="txt"/>
162 <param name="blastMode" value="BlastN"/> 162 <param name="blastMode" value="BlastN"/>
163 <param name="conFile" value="contaminants.txt" ftype="txt"/> 163 <param name="conFile" value="contaminants.txt" ftype="txt"/>
164 <output name="rma6_output" ftype="rma6"> 164 <output name="rma6_output" ftype="rma6">
165 <assert_contents> 165 <assert_contents>
166 <has_size value="19596"/> 166 <has_size value="19596" delta="25"/>
167 </assert_contents> 167 </assert_contents>
168 </output> 168 </output>
169 </test> 169 </test>
170 <!-- Dataset pair input --> 170 <!-- Dataset pair input -->
171 <test expect_num_outputs="1"> 171 <test expect_num_outputs="1">
175 <param name="blast1" value="blast_R1.txt" ftype="txt"/> 175 <param name="blast1" value="blast_R1.txt" ftype="txt"/>
176 <param name="blast2" value="blast_R2.txt" ftype="txt"/> 176 <param name="blast2" value="blast_R2.txt" ftype="txt"/>
177 <param name="blastMode" value="BlastN"/> 177 <param name="blastMode" value="BlastN"/>
178 <output name="rma6_output" ftype="rma6"> 178 <output name="rma6_output" ftype="rma6">
179 <assert_contents> 179 <assert_contents>
180 <has_size value="39887"/> 180 <has_size value="39887" delta="25"/>
181 </assert_contents> 181 </assert_contents>
182 </output> 182 </output>
183 </test> 183 </test>
184 <!-- List of dataset pairs input --> 184 <!-- List of dataset pairs input -->
185 <test expect_num_outputs="1"> 185 <test expect_num_outputs="1">
193 <param name="blast1" value="blast_R1.txt" ftype="txt"/> 193 <param name="blast1" value="blast_R1.txt" ftype="txt"/>
194 <param name="blast2" value="blast_R2.txt" ftype="txt"/> 194 <param name="blast2" value="blast_R2.txt" ftype="txt"/>
195 <param name="blastMode" value="BlastN"/> 195 <param name="blastMode" value="BlastN"/>
196 <output name="rma6_output" ftype="rma6"> 196 <output name="rma6_output" ftype="rma6">
197 <assert_contents> 197 <assert_contents>
198 <has_size value="39806"/> 198 <has_size value="39806" delta="1"/>
199 </assert_contents> 199 </assert_contents>
200 </output> 200 </output>
201 </test> 201 </test>
202 </tests> 202 </tests>
203 <help> 203 <help>