Mercurial > repos > iuc > meme_chip

annotate get_meme_motif_databases.py @ 1:091a9d638d78 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 0ba5f658424430eea10c79f92c9a8d7a1ca9eaf3
author iuc
date Thu, 15 Nov 2018 09:58:25 -0500
parents 6095db402811
children
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6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
1 import os
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
2
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
3
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
4 def get_meme_motif_database_options(file_path):
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
5 options = []
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
6 if not os.path.isdir(file_path):
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
7 return options
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
8 for i, file_name in enumerate(os.listdir(file_path)):
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
9 full_path = os.path.join(file_path, file_name)
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
10 options.append((file_name, full_path, i == 0))
6095db402811 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme_chip commit 9068afc3812495aaf88c9a2f5a224c634d634742
iuc
parents:
diff changeset
11 return options