Mercurial > repos > iuc > meme_dreme

diff test-data/fimo_output_test3.xml @ 2:3e5c80594237 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 86a94f48321780dbe18ef5b099434c347ec2f4d0"
author iuc
date Wed, 11 Dec 2019 18:04:55 -0500
parents cb8a2242bf03
children f33d77dcacce
line wrap: on
line diff
--- a/test-data/fimo_output_test3.xml	Thu May 17 14:11:27 2018 -0400
+++ b/test-data/fimo_output_test3.xml	Wed Dec 11 18:04:55 2019 -0500
@@ -1,14 +1,10 @@
 <?xml version="1.0" encoding="UTF-8" standalone="no"?>
 <!-- Begin document body -->
-<fimo version="4.12.0" release="Tue Jun 27 16:22:50 2017 -0700">
+<fimo version="5.0.5" release="Mon Mar 18 20:12:19 2019 -0700">
   xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
   xsi:schemaLocation=  xmlns:fimo="http://noble.gs.washington.edu/schema/fimo"
 >
-<command-line>fimo -o ./fimo_test4_out --thresh 0.01 --bgfile --uniform-- --max-stored-scores 100000 --motif ACTAAYH --motif-pseudo 0.1 dreme_fimo_input_1.xml hsa_chrM.fa</command-line>
 <settings>
-<setting name="output directory">./fimo_test4_out</setting>
-<setting name="MEME file name">dreme_fimo_input_1.xml</setting>
-<setting name="sequence file name">hsa_chrM.fa</setting>
 <setting name="background file name">--uniform--</setting>
 <setting name="allow clobber">false</setting>
 <setting name="compute q-values">true</setting>