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comparison test-data/meme_output_txt_1.txt @ 5:eca84de658b0 draft

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author iuc
date Fri, 17 Jun 2016 13:15:48 -0400
parents fd522a964017
children 53846f74a019
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4:cd54079f0f72 5:eca84de658b0
26 26
27 27
28 ******************************************************************************** 28 ********************************************************************************
29 TRAINING SET 29 TRAINING SET
30 ******************************************************************************** 30 ********************************************************************************
31 DATAFILE= /Users/gvk/work/git_workspace/galaxy/database/files/002/dataset_2490.dat 31 DATAFILE=
32 ALPHABET= ACDEFGHIKLMNPQRSTVWY 32 ALPHABET= ACDEFGHIKLMNPQRSTVWY
33 Sequence name Weight Length Sequence name Weight Length 33 Sequence name Weight Length Sequence name Weight Length
34 ------------- ------ ------ ------------- ------ ------ 34 ------------- ------ ------ ------------- ------ ------
35 chr21_19617074_19617124_ 1.0000 50 chr21_26934381_26934431_ 1.0000 50 35 chr21_19617074_19617124_ 1.0000 50 chr21_26934381_26934431_ 1.0000 50
36 chr21_28217753_28217803_ 1.0000 50 chr21_31710037_31710087_ 1.0000 50 36 chr21_28217753_28217803_ 1.0000 50 chr21_31710037_31710087_ 1.0000 50
53 COMMAND LINE SUMMARY 53 COMMAND LINE SUMMARY
54 ******************************************************************************** 54 ********************************************************************************
55 This information can also be useful in the event you wish to report a 55 This information can also be useful in the event you wish to report a
56 problem with the MEME software. 56 problem with the MEME software.
57 57
58 command: meme /Users/gvk/work/git_workspace/galaxy/database/files/002/dataset_2490.dat -o /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/001/1912/dataset_2530_files -nostatus 58 command: meme
59 59
60 model: mod= zoops nmotifs= 1 evt= inf 60 model: mod= zoops nmotifs= 1 evt= inf
61 object function= E-value of product of p-values 61 object function= E-value of product of p-values
62 width: minw= 8 maxw= 50 62 width: minw= 8 maxw= 50
63 width: wg= 11 ws= 1 endgaps= yes 63 width: wg= 11 ws= 1 endgaps= yes
265 -------------------------------------------------------------------------------- 265 --------------------------------------------------------------------------------
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269 269
270 Time 0.53 secs. 270 Time
271 271
272 ******************************************************************************** 272 ********************************************************************************
273 273
274 274
275 ******************************************************************************** 275 ********************************************************************************
318 318
319 ******************************************************************************** 319 ********************************************************************************
320 Stopped because requested number of motifs (1) found. 320 Stopped because requested number of motifs (1) found.
321 ******************************************************************************** 321 ********************************************************************************
322 322
323 CPU: MacBook-Pro-2.local 323 CPU:
324 324
325 ******************************************************************************** 325 ********************************************************************************