Mercurial > repos > iuc > meme_fimo

diff test-data/streme_output_test2.html @ 20:613c75eee7bd draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 89ee0af6e955ff964b7984d77ad536e0a9154278
author: iuc
date: Mon, 14 Jul 2025 21:33:56 +0000
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/streme_output_test2.html	Mon Jul 14 21:33:56 2025 +0000
@@ -0,0 +1,43 @@
+        "train_negatives": {
+          "from": "shuffled",
+          "count": 33,
+          "positions": 1597
+        },
+        "test_positives": {
+          "count": 0,
+          "positions": 0
+        },
+        "test_negatives": {
+          "count": 0,
+          "positions": 0
+        },
+        "sequence_db": {
+          "freqs": [
+            0.218, 0.24, 0.24, 0.218, 0.0266, 0.0125, 0, 0.00313, 0, 0,
+            0.0266, 0, 0, 0, 0.0125, 0.00313
+          ]
+        },
+        "motifs": [
+          {
+            "db": 0,
+            "id": "1-GTATAAAAGC",
+            "alt": "STREME-1",
+            "width": 10,
+            "initial_width": 5,
+            "seed": "GTATAAAGGC",
+            "score_threshold": 9.73039,
+            "npassing": 28,
+            "train_pos_count": 28,
+            "train_neg_count": 0,
+            "train_log_pvalue": -13.1578,
+            "train_pvalue": "7.0e-014",
+            "train_dtc": -1.0,
+            "train_bernoulli": -1,
+            "test_pos_count": 0,
+            "test_neg_count": 0,
+            "test_log_pvalue": 0,
+            "test_pvalue": "1.0e+000",
+            "test_log_evalue": 0.477121,
+            "test_evalue": "3.0e+000",
+            "test_dtc": -1.0,
+            "test_bernoulli": -1,
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