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comparison test-data/meme_output_txt_1.txt @ 9:794b2859c286 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 211bfa0f58a0691fb7b0c2623763112fdcb76dbd
author iuc
date Thu, 29 Jun 2017 20:39:45 -0400
parents 487ce3fa1822
children
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8:e8b209806a20 9:794b2859c286
1 ******************************************************************************** 1 ********************************************************************************
2 MEME - Motif discovery tool 2 MEME - Motif discovery tool
3 ******************************************************************************** 3 ********************************************************************************
4 MEME version 4.11.1 (Release date: Fri Jan 15 12:51:59 2016 -0800) 4 MEME version 4.11.2 (Release date: Thu May 05 14:58:55 2016 -0700)
5 5
6 For further information on how to interpret these results or to get 6 For further information on how to interpret these results or to get
7 a copy of the MEME software please access http://meme-suite.org . 7 a copy of the MEME software please access http://meme-suite.org .
8 8
9 This file may be used as input to the MAST algorithm for searching 9 This file may be used as input to the MAST algorithm for searching
26 26
27 27
28 ******************************************************************************** 28 ********************************************************************************
29 TRAINING SET 29 TRAINING SET
30 ******************************************************************************** 30 ********************************************************************************
31 DATAFILE= 31 DATAFILE= /tmp/tmpCNK6l0/files/000/dataset_22.dat
32 ALPHABET= ACDEFGHIKLMNPQRSTVWY 32 ALPHABET= ACDEFGHIKLMNPQRSTVWY
33 Sequence name Weight Length Sequence name Weight Length 33 Sequence name Weight Length Sequence name Weight Length
34 ------------- ------ ------ ------------- ------ ------ 34 ------------- ------ ------ ------------- ------ ------
35 chr21_19617074_19617124_ 1.0000 50 chr21_26934381_26934431_ 1.0000 50 35 chr21_19617074_19617124_ 1.0000 50 chr21_26934381_26934431_ 1.0000 50
36 chr21_28217753_28217803_ 1.0000 50 chr21_31710037_31710087_ 1.0000 50 36 chr21_28217753_28217803_ 1.0000 50 chr21_31710037_31710087_ 1.0000 50
53 COMMAND LINE SUMMARY 53 COMMAND LINE SUMMARY
54 ******************************************************************************** 54 ********************************************************************************
55 This information can also be useful in the event you wish to report a 55 This information can also be useful in the event you wish to report a
56 problem with the MEME software. 56 problem with the MEME software.
57 57
58 command: meme 58 command: meme /tmp/tmpCNK6l0/files/000/dataset_22.dat -o /tmp/tmpCNK6l0/job_working_directory/000/11/dataset_23_files -nostatus -maxsize 1000000
59 59
60 model: mod= zoops nmotifs= 1 evt= inf 60 model: mod= zoops nmotifs= 1 evt= inf
61 object function= E-value of product of p-values 61 object function= E-value of product of p-values
62 width: minw= 8 maxw= 50 62 width: minw= 8 maxw= 50
63 width: wg= 11 ws= 1 endgaps= yes 63 width: wg= 11 ws= 1 endgaps= yes
265 -------------------------------------------------------------------------------- 265 --------------------------------------------------------------------------------
266 266
267 267
268 268
269 269
270 Time 270 Time 0.72 secs.
271 271
272 ******************************************************************************** 272 ********************************************************************************
273 273
274 274
275 ******************************************************************************** 275 ********************************************************************************
318 318
319 ******************************************************************************** 319 ********************************************************************************
320 Stopped because requested number of motifs (1) found. 320 Stopped because requested number of motifs (1) found.
321 ******************************************************************************** 321 ********************************************************************************
322 322
323 CPU: 323 CPU: bigsky
324 324
325 ******************************************************************************** 325 ********************************************************************************