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comparison test-data/fimo_output_test2.html @ 19:7ce0fe11b411 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 93fe7345e2b6a97000975d978bf06513b3a442d9
author iuc
date Thu, 29 Aug 2024 10:20:10 +0000
parents 19237efe98d1
children
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18:19237efe98d1 19:7ce0fe11b411
1 <td style="padding-left: 5em; padding-right: 2em">alphabet = DNA</td>
2 <td style="padding-left: 5em; padding-right: 2em">max stored scores = 100000</td>
3 </tr> <tr>
4 <td style="padding-right: 2em">allow clobber = false</td>
5 <td style="padding-left: 5em; padding-right: 2em">compute q-values = true</td>
6 <td style="padding-left: 5em; padding-right: 2em">parse genomic coord. = false</td>
7 </tr>
8 <tr>
9 <td style="padding-right: 2em">text only = false</td>
10 <td style="padding-left: 5em; padding-right: 2em">scan both strands = true</td>
11 <td style="padding-left: 5em; padding-right: 2em">max strand = false</td>
12 </tr>
13 <tr>
14 <td style="padding-right: 2em">threshold type = p-value</td>
15 <td style="padding-left: 5em; padding-right: 2em">output theshold = 0.0001</td>
16 <td style="padding-left: 5em; padding-right: 2em">pseudocount = 0.1</td>
17 </tr>
18 <tr>
19 <td style="padding-right: 2em">alpha = 1</td>
20 <td style="padding-left: 5em; padding-right: 2em">verbosity = 2</td>
21 <td style="padding-left: 5em; padding-right: 2em"></td>
22 </tr>
23
24 </table>
25 </pre>
26 <p>
27 This information can be useful in the event you wish to report a
28 problem with the FIMO software.
29 </p>
30 <hr>
31 <span style="background-color: #DDDDFF"><a href="#top_buttons"><b>Go to top</b></a></span>
32 </body>
33 </html>