Mercurial > repos > iuc > meme_meme

diff test-data/dreme_output_test2.xml @ 14:3f0dd362b755 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 86a94f48321780dbe18ef5b099434c347ec2f4d0"
author: iuc
date: Wed, 11 Dec 2019 18:05:15 -0500
parents: 57e5d9382f36
children: 19237efe98d1
--- a/test-data/dreme_output_test2.xml	Thu May 17 14:10:48 2018 -0400
+++ b/test-data/dreme_output_test2.xml	Wed Dec 11 18:05:15 2019 -0500
@@ -1,7 +1,5 @@
-<dreme version="4.12.0" release="Tue Jun 27 16:22:50 2017 -0700">
+<dreme version="5.0.5" release="Mon Mar 18 20:12:19 2019 -0700">
   <model>
-    <command_line>dreme -o ./dreme_test2_out -p dreme_test_sites.fa -norc -rna -s 1 -e 1e-05 -g 100 -mink 4 -maxk 10</command_line>
-    <positives name="dreme test sites" count="1000" file="dreme_test_sites.fa" last_mod_date="Thu Apr 26 15:09:03 CEST 2018" />
     <negatives name="shuffled positive sequences" count="1000" from="shuffled"/>
     <alphabet name="RNA" like="rna">
       <letter id="A" symbol="A" name="Adenine" colour="CC0000"/>
@@ -26,8 +24,6 @@
     <ngen>100</ngen>
     <add_pv_thresh>0.01</add_pv_thresh>
     <seed>1</seed>
-    <host>ThinkPad-T450s</host>
-    <when>Thu May 03 13:22:11 CEST 2018</when>
   </model>
   <motifs>
     <motif id="m01" alt="DREME-1" seq="UUYUCY" length="6" nsites="459" p="387" n="210" pvalue="2.6e-018" evalue="3.3e-013" unerased_evalue="3.3e-013">
@@ -51,5 +47,4 @@
       <match seq="UAGG" p="232" n="165" pvalue="1.1e-004" evalue="1.3e+001"/>
     </motif>
   </motifs>
-  <run_time cpu="15.97" real="15.97" stop="evalue"/>
 </dreme>