Mercurial > repos > iuc > meme_meme

diff meme.xml @ 13:57e5d9382f36 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit e2cf796f991cbe8c96e0cc5a0056b7255ac3ad6b
author iuc
date Thu, 17 May 2018 14:10:48 -0400
parents 7a5164f99316
children 3f0dd362b755
line wrap: on
line diff
--- a/meme.xml	Wed Apr 25 12:12:22 2018 -0400
+++ b/meme.xml	Thu May 17 14:10:48 2018 -0400
@@ -1,5 +1,5 @@
 <tool id="meme_meme" name="MEME" version="@WRAPPER_VERSION@.0">
-    <description>- Multiple Em for Motif Elicitation</description>
+    <description>- Multiple EM for Motif Elicitation</description>
     <macros>
         <import>macros.xml</import>
     </macros>
@@ -280,18 +280,18 @@
             <param name="input1" value="meme_input_1.fasta" ftype="fasta" dbkey="hg19"/>
             <param name="options_type_selector" value="basic"/>
             <param name="non_commercial_use" value="True"/>
-            <output name="html_outfile" file="meme_output_html_1.html" compare="contains"/>
-            <output name="txt_outfile" file="meme_output_txt_1.txt" lines_diff="12"/>
-            <output name="xml_outfile" file="meme_output_xml_1.xml" lines_diff="8"/>
+            <output name="html_outfile" file="meme_output_test1.html" lines_diff="20"/>
+            <output name="txt_outfile" file="meme_output_test1.txt" lines_diff="12"/>
+            <output name="xml_outfile" file="meme_output_test1.xml" lines_diff="8"/>
         </test>
         <test>
             <param name="input1" value="meme_input_1.fasta" ftype="fasta" dbkey="hg19"/>
             <param name="options_type_selector" value="advanced"/>
             <param name="plib" value="prior30.plib" ftype="txt"/>
             <param name="non_commercial_use" value="True"/>
-            <output name="html_outfile" file="meme_output_html_2.html" compare="contains"/>
-            <output name="txt_outfile" file="meme_output_txt_2.txt" lines_diff="12"/>
-            <output name="xml_outfile" file="meme_output_xml_2.xml" lines_diff="8"/>
+            <output name="html_outfile" file="meme_output_test2.html" lines_diff="20"/>
+            <output name="txt_outfile" file="meme_output_test2.txt" lines_diff="12"/>
+            <output name="xml_outfile" file="meme_output_test2.xml" lines_diff="8"/>
         </test>
     </tests>
     <help>
@@ -327,7 +327,7 @@
     author = {Bailey, Timothy L. and Elkan, Charles},
     title = {Fitting a mixture model by expectation maximization to discover motifs in biopolymers},
     url = {https://www.aaai.org/Papers/ISMB/1994/ISMB94-004.pdf},
-    year = {1994},
+    year = {1994}
 }
         </citation>
     </citations>