Mercurial > repos > iuc > meme_meme

view test-data/fimo_output_txt_2.txt @ 5:34c794383f81 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit dc83f3908392f1444da623f26716eadc6967ce43
author iuc
date Fri, 18 Mar 2016 08:23:54 -0400
parents d20e391eb22f
children
line wrap: on
line source

#pattern name	sequence name	start	stop	strand	score	p-value	q-value	matched sequence
1	phiX174	1388	1398	+	29.4024	6.36e-11	0	AATATCTATAA
1	phiX174	847	857	+	29.122	7.02e-11	0	AATGTCTAAAG
1	phiX174	2301	2311	+	27.6463	1.08e-10	0	AGGTTATAACG
1	phiX174	5063	5073	+	25.5366	2.73e-10	0	AGGAGCTAAAG
1	phiX174	989	999	+	25.3049	3.15e-10	0	TGAGGATAAAT
1	phiX174	4713	4723	+	23.622	7.74e-10	0	GACTGCTATCA
1	phiX174	5048	5058	+	23.3293	8.51e-10	0	TGCTGCTAAAG
1	phiX174	855	865	+	23.3049	8.64e-10	0	AAGGTAAAAAA
1	phiX174	3155	3165	+	23.0366	9.76e-10	0	TATGGCTAAAG
1	phiX174	5009	5019	+	23.0366	9.76e-10	0	TGTGGCTAAAT
1	phiX174	814	824	+	22.5854	1.28e-09	0	TGCGTCAAAAA
1	phiX174	2832	2842	+	22.3415	1.42e-09	0	TTGGTCTAACT
1	phiX174	3830	3840	+	21.8293	1.7e-09	0	TATTGATAAAG
1	phiX174	3560	3570	+	21.5976	1.89e-09	0	TGCGTCTATTA
1	phiX174	2882	2892	+	21.1951	2.29e-09	0	AGGTTATTAAA
1	phiX174	4453	4463	+	20.8902	2.58e-09	0	AAGGTATTAAG
1	phiX174	2493	2503	+	20.3415	3.06e-09	0	GACACCTAAAG
1	phiX174	4104	4114	+	20.3171	3.08e-09	0	GGCTTCCATAA
1	phiX174	4955	4965	+	20.3171	3.08e-09	0	TGATGCTAAAG
1	phiX174	1885	1895	+	19.9268	3.61e-09	0	TGCGACTAAAG
1	phiX174	3376	3386	+	19.7683	3.81e-09	0	AGAATCAAAAA
1	phiX174	52	62	+	19.5732	4.06e-09	0	TGAGTCGAAAA
1	phiX174	1390	1400	+	19.378	4.26e-09	0	TATCTATAACA
1	phiX174	2017	2027	+	19.0854	4.6e-09	0	TTCGTCTAAGA
1	phiX174	1000	1010	+	18.878	4.88e-09	0	TATGTCTAATA
1	phiX174	1555	1565	+	18.439	5.58e-09	0	GACTTCTACCA
1	phiX174	4430	4440	+	18.4268	5.62e-09	0	TGAGTATAATT
1	phiX174	1927	1937	+	18.2927	5.82e-09	0	GACTTATACCG
1	phiX174	2981	2991	+	18.0732	6.13e-09	0	CATGTCTAAAT
1	phiX174	4203	4213	+	17.9268	6.34e-09	0	GACGGCCATAA
1	phiX174	1669	1679	+	17.8659	6.4e-09	0	TGGAGGTAAAA
1	phiX174	3260	3270	+	17.5	7.01e-09	0	CGCTGATAAAG
1	phiX174	3047	3057	+	17.2805	7.4e-09	0	TACCGATAACA
1	phiX174	4176	4186	+	17.1829	7.6e-09	0	GAGTTCGATAA
1	phiX174	4118	4128	+	17.1341	7.7e-09	0	GATGGATAACC
1	phiX174	5370	5380	+	16.9878	8.03e-09	0	GGCGTATCCAA
1	phiX174	1242	1252	+	16.5122	8.94e-09	0	AGTGGATTAAG
1	phiX174	2583	2593	+	16.5122	8.94e-09	0	TACATCTGTCA
1	phiX174	698	708	+	16.4146	9.13e-09	0	TACGGAAAACA
1	phiX174	2299	2309	+	16.3537	9.26e-09	0	TGAGGTTATAA
1	phiX174	4189	4199	+	16.1707	9.69e-09	0	GTGATATGTAT
1	phiX174	275	285	+	16.0976	9.85e-09	0	GGTTTAGATAT
1	phiX174	1801	1811	+	16.0366	1e-08	0	GACCTATAAAC
1	phiX174	1386	1396	+	15.9268	1.03e-08	0	TGAATATCTAT
1	phiX174	1303	1313	+	15.9024	1.03e-08	0	TGGTTATATTG
1	phiX174	3772	3782	+	15.878	1.04e-08	0	AGGATATTTCT
1	phiX174	1288	1298	+	15.8659	1.04e-08	0	GACTGTTAACA
1	phiX174	2577	2587	+	15.7683	1.08e-08	0	GATGGATACAT
1	phiX174	937	947	+	15.7561	1.08e-08	0	TTGGTATGTAG
1	phiX174	904	914	+	15.6585	1.11e-08	0	AGGTACTAAAG
1	phiX174	2279	2289	+	15.5854	1.13e-08	0	TCGTGATAAAA
1	phiX174	3164	3174	+	15.5	1.16e-08	0	AGCTGGTAAAG
1	phiX174	24	34	+	15.3293	1.23e-08	0	AGAAGTTAACA
1	phiX174	838	848	+	15.2561	1.27e-08	0	GAGTGATGTAA
1	phiX174	853	863	+	15.2561	1.27e-08	0	TAAAGGTAAAA
1	phiX174	1984	1994	+	15.0244	1.36e-08	0	AATTTCTATGA
1	phiX174	1	11	+	14.8293	1.46e-08	0	GAGTTTTATCG
1	phiX174	4307	4317	+	14.7927	1.47e-08	0	TATTAATAACA
1	phiX174	4303	4313	+	14.6585	1.52e-08	0	TTGATATTAAT
1	phiX174	5033	5043	+	14.561	1.58e-08	0	GTCAGATATGG
1	phiX174	2579	2589	+	14.2927	1.73e-08	0	TGGATACATCT
1	phiX174	322	332	+	14.1951	1.82e-08	0	GACATTTTAAA
1	phiX174	5001	5011	+	13.8902	2.09e-08	0	GGTTTCTATGT
1	phiX174	4217	4227	+	13.8171	2.15e-08	0	TGCTTCTGACG
1	phiX174	4262	4272	+	13.7805	2.18e-08	0	AATGGATGAAT
1	phiX174	3569	3579	+	13.7073	2.26e-08	0	TATGGAAAACA
1	phiX174	194	204	+	13.6829	2.29e-08	0	ATCAACTAACG
1	phiX174	131	141	+	13.4756	2.49e-08	0	AAATGAGAAAA
1	phiX174	1491	1501	+	13.4024	2.55e-08	0	GCCATCTCAAA
1	phiX174	434	444	+	13.2805	2.67e-08	0	GGCCTCTATTA
1	phiX174	4565	4575	+	13.2439	2.73e-08	0	TTGGTTTATCG
1	phiX174	102	112	+	13.2195	2.75e-08	0	GAATTAAATCG
1	phiX174	903	913	+	13.1463	2.82e-08	0	GAGGTACTAAA
1	phiX174	4748	4758	+	12.9756	3.01e-08	0	TACAGCTAATG
1	phiX174	2622	2632	+	12.8659	3.16e-08	0	TGCTGATATTG
1	phiX174	467	477	+	12.7317	3.35e-08	0	TTTGGATTTAA
1	phiX174	4033	4043	+	12.6829	3.44e-08	0	AGCGTATCGAG
1	phiX174	1348	1358	+	12.6707	3.46e-08	0	TACCAATAAAA
1	phiX174	239	249	+	12.5732	3.62e-08	0	AGTGGCTTAAT
1	phiX174	500	510	+	12.4634	3.84e-08	0	GACGAGTAACA
1	phiX174	3001	3011	+	12.4146	3.93e-08	0	GCGGTCAAAAA
1	phiX174	3776	3786	+	12.378	3.98e-08	0	TATTTCTAATG
1	phiX174	2026	2036	+	12.3293	4.06e-08	0	GAAGTTTAAGA
1	phiX174	4237	4247	+	12.3049	4.12e-08	0	AGTTTGTATCT
1	phiX174	803	813	+	12.2439	4.24e-08	0	AGAAGAAAACG
1	phiX174	3770	3780	+	12.1829	4.35e-08	0	AAAGGATATTT
1	phiX174	3429	3439	+	12.122	4.45e-08	0	GAGATGCAAAA
1	phiX174	99	109	+	12.1098	4.48e-08	0	TACGAATTAAA
1	phiX174	67	77	+	11.9268	4.78e-08	0	TCTTGATAAAG
1	phiX174	5332	5342	+	11.7195	5.13e-08	0	ATCTGCTCAAA
1	phiX174	277	287	+	11.7073	5.14e-08	0	TTTAGATATGA
1	phiX174	4338	4348	+	11.6951	5.18e-08	0	GGGGACGAAAA
1	phiX174	3812	3822	+	11.6585	5.28e-08	0	GGTTGATATTT
1	phiX174	1909	1919	+	11.5488	5.51e-08	0	TAACGCTAAAG
1	phiX174	3000	3010	+	11.5366	5.54e-08	0	GGCGGTCAAAA
1	phiX174	3891	3901	+	11.439	5.75e-08	0	ATTGGCTCTAA
1	phiX174	3079	3089	+	11.4268	5.76e-08	0	CTGGTATTAAA
1	phiX174	37	47	+	11.4146	5.79e-08	0	TTCGGATATTT
1	phiX174	380	390	+	11.3293	6.01e-08	0	GTAAGAAATCA