Mercurial > repos > iuc > meme_psp_gen

comparison test-data/fimo_output_test3.html @ 7:47e7ae719765 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 93fe7345e2b6a97000975d978bf06513b3a442d9
author iuc
date Thu, 29 Aug 2024 10:19:24 +0000
parents 5f95d385a33c
children
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6:5f95d385a33c 7:47e7ae719765
1 <td style="padding-right: 2em">background file name = --uniform--</td>
2 <td style="padding-left: 5em; padding-right: 2em">alphabet = DNA</td>
3 <td style="padding-left: 5em; padding-right: 2em">max stored scores = 100000</td>
4 </tr> <tr>
5 <td style="padding-right: 2em">allow clobber = false</td>
6 <td style="padding-left: 5em; padding-right: 2em">compute q-values = true</td>
7 <td style="padding-left: 5em; padding-right: 2em">parse genomic coord. = false</td>
8 </tr>
9 <tr>
10 <td style="padding-right: 2em">text only = false</td>
11 <td style="padding-left: 5em; padding-right: 2em">scan both strands = true</td>
12 <td style="padding-left: 5em; padding-right: 2em">max strand = false</td>
13 </tr>
14 <tr>
15 <td style="padding-right: 2em">threshold type = p-value</td>
16 <td style="padding-left: 5em; padding-right: 2em">output theshold = 0.01</td>
17 <td style="padding-left: 5em; padding-right: 2em">pseudocount = 0.1</td>
18 </tr>
19 <tr>
20 <td style="padding-right: 2em">alpha = 1</td>
21 <td style="padding-left: 5em; padding-right: 2em">verbosity = 2</td>
22 <td style="padding-left: 5em; padding-right: 2em"></td>
23 </tr>