--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/streme_output_test1.txt	Mon Jul 14 21:33:08 2025 +0000
@@ -0,0 +1,93 @@
+********************************************************************************
+STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
+********************************************************************************
+MEME version 5.5.8 (Release date: Thu May 15 15:01:46 2025 -0700)
+
+For further information on how to interpret these results please access https://meme-suite.org/meme.
+To get a copy of the MEME Suite software please access https://meme-suite.org.
+
+********************************************************************************
+
+
+********************************************************************************
+REFERENCE
+********************************************************************************
+If you use this program in your research, please cite:
+
+Timothy L. Bailey,
+"STREME: accurate and versatile sequence motif discovery",
+Bioinformatics, Mar. 24, 2021.
+********************************************************************************
+
+
+ALPHABET= ACGT
+
+strands: + -
+
+Background letter frequencies
+A 0.244 C 0.256 G 0.256 T 0.244 
+
+MOTIF 1-CTTTTATAYRCCY STREME-1
+letter-probability matrix: alength= 4 w= 13 nsites= 18 S= 1.5e-007
+ 0.072963 0.851476 0.002598 0.072963
+ 0.072963 0.145128 0.002598 0.779311
+ 0.002486 0.002598 0.073075 0.921841
+ 0.002486 0.002598 0.002598 0.992318
+ 0.002486 0.002598 0.002598 0.992318
+ 0.992318 0.002598 0.002598 0.002486
+ 0.002486 0.002598 0.073075 0.921841
+ 0.992318 0.002598 0.002598 0.002486
+ 0.002486 0.497514 0.002598 0.497402
+ 0.284394 0.143552 0.499090 0.072963
+ 0.002486 0.710522 0.002598 0.284394
+ 0.002486 0.779422 0.073075 0.145017
+ 0.072963 0.428613 0.073075 0.425349
+
+MOTIF 2-CCCCACCRSC STREME-2
+letter-probability matrix: alength= 4 w= 10 nsites= 12 S= 7.2e-005
+ 0.139001 0.787776 0.070814 0.002409
+ 0.070705 0.924368 0.002517 0.002409
+ 0.002409 0.924368 0.070814 0.002409
+ 0.002409 0.992664 0.002517 0.002409
+ 0.716267 0.002517 0.210510 0.070705
+ 0.002409 0.856072 0.070814 0.070705
+ 0.208825 0.786248 0.002517 0.002409
+ 0.343890 0.030359 0.555046 0.070705
+ 0.070705 0.376471 0.550414 0.002409
+ 0.208825 0.786248 0.002517 0.002409
+
+MOTIF 3-RCAGAAKCA STREME-3
+letter-probability matrix: alength= 4 w= 9 nsites= 10 S= 4.4e-004
+ 0.595835 0.003626 0.397069 0.003470
+ 0.003470 0.694352 0.298708 0.003470
+ 0.792557 0.003626 0.101987 0.101831
+ 0.003470 0.101987 0.891074 0.003470
+ 0.694196 0.003626 0.298708 0.003470
+ 0.694196 0.298708 0.003626 0.003470
+ 0.003470 0.101987 0.300909 0.593635
+ 0.101831 0.792713 0.003626 0.101831
+ 0.989279 0.003626 0.003626 0.003470
+
+MOTIF 4-RAGTTATAAA STREME-4
+letter-probability matrix: alength= 4 w= 10 nsites= 8 S= 2.4e-003
+ 0.333562 0.113112 0.440386 0.112939
+ 0.988110 0.004021 0.004021 0.003848
+ 0.003848 0.004021 0.879191 0.112939
+ 0.003848 0.004021 0.222204 0.769927
+ 0.112939 0.004021 0.004021 0.879018
+ 0.769927 0.004021 0.113112 0.112939
+ 0.003848 0.004021 0.113112 0.879018
+ 0.988110 0.004021 0.004021 0.003848
+ 0.549304 0.113112 0.113112 0.224471
+ 0.769927 0.004021 0.113112 0.112939
+
+MOTIF 5-AACCTCGG STREME-5
+letter-probability matrix: alength= 4 w= 8 nsites= 7 S= 5.5e-003
+ 0.973700 0.008894 0.008894 0.008511
+ 0.732403 0.250191 0.008894 0.008511
+ 0.008511 0.974083 0.008894 0.008511
+ 0.008511 0.974083 0.008894 0.008511
+ 0.008511 0.008894 0.008894 0.973700
+ 0.008511 0.732786 0.250191 0.008511
+ 0.249809 0.008894 0.732786 0.008511
+ 0.008511 0.008894 0.974083 0.008511
\ No newline at end of file