Mercurial > repos > iuc > merqury

comparison merqury_plot_CN.xml @ 6:eb7b00ec347d draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/merqury commit 9aec17d26f63629419228ef07e76e789e5244891
author iuc
date Sat, 13 Apr 2024 19:17:55 +0000
parents d7edbc9c3a07
children
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5:d7edbc9c3a07 6:eb7b00ec347d
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools"/> 6 <expand macro="bio_tools"/>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <version_command>merqury --version</version_command> 8 <version_command>merqury --version</version_command>
9
10 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
11 mkdir -p output_files/ && 10 mkdir -p output_files/ &&
11 export MERQURY="\$(dirname \$(which merqury.sh))/../share/merqury" &&
12 \$MERQURY/plot/plot_spectra_cn.R 12 \$MERQURY/plot/plot_spectra_cn.R
13 -f '$input1' 13 -f '$input1'
14 -o output_files/merqury_plot 14 -o output_files/merqury_plot
15 #if $z 15 #if $z
16 --zero-hist '$z' 16 --zero-hist '$z'