Mercurial > repos > iuc > meryl_trio_mode

<macros>
    <token name="@TOOL_VERSION@">1.3</token>
    <token name="@GALAXY_TOOL_VERSION@">galaxy</token>
    <token name="@SUFFIX_VERSION@">7</token>
    <token name="@PROFILE@">22.01</token>
    <xml name="edam_ontology">
        <edam_topics>
            <edam_topic>topic_0196</edam_topic>
        </edam_topics>
        <edam_operations>
            <edam_operation>operation_0525</edam_operation>
        </edam_operations>
    </xml>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="1.1">merqury</requirement>
            <requirement type="package" version="@TOOL_VERSION@">meryl</requirement>
            <requirement type="package" version="1.34">tar</requirement>
            <requirement type="package" version="2.8">pigz</requirement>
        </requirements>
    </xml>
    <xml name="meryldb_archive_assumptions">
        <has_archive_member path="^[^/]+.meryl$" n="1"/>  <!-- folder also counts -->
        <has_archive_member path="[^/]+.meryl/merylIndex" n="1" all="true">
            <has_size min="1"/>
        </has_archive_member>
        <has_archive_member path="[^/]+.meryl/.*\.merylIndex" n="64" all="true">
            <has_size min="1"/>
        </has_archive_member>
        <has_archive_member path="[^/]+.meryl/.*\.merylData" n="64" all="true">
            <!-- <has_size min="1"/> seems to be 0 sometimes -->
        </has_archive_member>
        <has_archive_member path=".*" n="130"/>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="bibtex">
                @misc{githubMeryl,
                author = {Arang Rhie, Brian P. Walez, Sergey Koren, Adam M. Phillippy},
                year = {2020},
                title = {Meryl},
                publisher = {GitHub},
                journal = {GitHub repository},
                url = {https://github.com/marbl/meryl},
                }
            </citation>
        </citations>
    </xml>
</macros>
author	iuc
date	Tue, 08 Oct 2024 16:43:34 +0000
parents	c85aec7804a4
children