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comparison metaphlan.xml @ 3:ff8f55893e7d draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit edceb1050e9e312ef8b1201cee35992720667b6a"
author iuc
date Fri, 24 Sep 2021 07:23:52 +0000
parents a92a632c4d9b
children 6dee4abadccb
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2:a92a632c4d9b 3:ff8f55893e7d
235 <param argument="--read_min_len" type="integer" value="70" label="Minimum length of the reads to be considered when parsing the input file"/> 235 <param argument="--read_min_len" type="integer" value="70" label="Minimum length of the reads to be considered when parsing the input file"/>
236 <section name="mapping" title="Mapping" expanded="true"> 236 <section name="mapping" title="Mapping" expanded="true">
237 <param argument="--bt2_ps" type="select" label="Presets options for BowTie2" help="Applied only with FASTA files"> 237 <param argument="--bt2_ps" type="select" label="Presets options for BowTie2" help="Applied only with FASTA files">
238 <option value="sensitive">Sensitive</option> 238 <option value="sensitive">Sensitive</option>
239 <option value="very-sensitive" selected="true">Very sensitive</option> 239 <option value="very-sensitive" selected="true">Very sensitive</option>
240 <option value="sensite-local">Sensitive local</option> 240 <option value="sensitive-local">Sensitive local</option>
241 <option value="very-sensite-local">Very sensitive local</option> 241 <option value="very-sensitive-local">Very sensitive local</option>
242 </param> 242 </param>
243 <param argument="--min_mapq_val" type="integer" value="5" label="Minimum mapping quality value (MAPQ)"/> 243 <param argument="--min_mapq_val" type="integer" value="5" label="Minimum mapping quality value (MAPQ)"/>
244 </section> 244 </section>
245 </when> 245 </when>
246 <when value="sam"> 246 <when value="sam">