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comparison macros.xml @ 13:1f06dccdc5d1 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/minimap2 commit c8aee6bdc2b4254df523c05890b4e3c4de5928f8"
author iuc
date Fri, 11 Jun 2021 21:40:01 +0000
parents 037c6e54df11
children 09b53c1d4ab1
comparison
equal deleted inserted replaced
12:037c6e54df11 13:1f06dccdc5d1
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">2.20</token> 2 <token name="@TOOL_VERSION@">2.20</token>
3 <token name="@GALAXY_TOOL_VERSION@">galaxy0</token> 3 <token name="@GALAXY_TOOL_VERSION@">galaxy1</token>
4 <xml name="edam_ontology"> 4 <xml name="edam_ontology">
5 <edam_topics> 5 <edam_topics>
6 <edam_topic>topic_0102</edam_topic> 6 <edam_topic>topic_0102</edam_topic>
7 </edam_topics> 7 </edam_topics>
8 <edam_operations> 8 <edam_operations>
22 <option value="sr">Short reads without splicing (-k21 -w11 --sr -F800 -A2 -B8 -O12,32 -E2,1 -r50 -p.5 -N20 -f1000,5000 -n2 -m20 -s40 -g200 -2K50m --heap-sort=yes --secondary=no) (sr)</option> 22 <option value="sr">Short reads without splicing (-k21 -w11 --sr -F800 -A2 -B8 -O12,32 -E2,1 -r50 -p.5 -N20 -f1000,5000 -n2 -m20 -s40 -g200 -2K50m --heap-sort=yes --secondary=no) (sr)</option>
23 </param> 23 </param>
24 </xml> 24 </xml>
25 <xml name="citations"> 25 <xml name="citations">
26 <citations> 26 <citations>
27 <citations> 27 <citation type="doi">10.1093/bioinformatics/btp324</citation>
28 <citation type="doi">10.1093/bioinformatics/btp324</citation> 28 <citation type="doi">10.1093/bioinformatics/btp698</citation>
29 <citation type="doi">10.1093/bioinformatics/btp698</citation> 29 <citation type="bibtex">@misc{1303.3997,
30 <citation type="bibtex">@misc{1303.3997, 30 Author = {Heng Li},
31 Author = {Heng Li}, 31 Title = {Minimap2: fast pairwise alignment for long nucleotide sequences},
32 Title = {Minimap2: fast pairwise alignment for long nucleotide sequences}, 32 Year = {2017},
33 Year = {2017}, 33 Eprint = {arXiv:1708.01492},
34 Eprint = {arXiv:1708.01492}, 34 url = {https://arxiv.org/abs/1708.01492},
35 url = {https://arxiv.org/abs/1708.01492}, 35 }</citation>
36 }</citation>
37 </citations>
38 </citations> 36 </citations>
39 </xml> 37 </xml>
40 </macros> 38 </macros>