Mercurial > repos > iuc > mothur_create_database

comparison test-data/abrecovery.pds.wang.tree.sum @ 0:9ab5ebae3fb2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
author iuc
date Fri, 19 May 2017 05:56:16 -0400
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-1:000000000000 0:9ab5ebae3fb2
1 #1.36.1
2 171
3 6
4 0 Root 3 Bacteria 2 unclassified 59 unknown 1
5 1 unknown 1 unclassified 117
6 1 Bacteria 6 "Actinobacteria" 32 "Bacteroidetes" 3 "Proteobacteria" 13 Firmicutes 8 TM7 40 unclassified 60
7 2 "Bacteroidetes" 2 "Bacteroidia" 4 unclassified 66
8 3 "Bacteroidia" 2 "Bacteroidales" 5 unclassified 67
9 4 "Bacteroidales" 3 "Porphyromonadaceae" 6 Bacteroidaceae 22 unclassified 68
10 5 "Porphyromonadaceae" 2 Parabacteroides 7 unclassified 69
11 6 Parabacteroides 1 unclassified 70
12 2 Firmicutes 4 Clostridia 9 Erysipelotrichia 55 Negativicutes 47 unclassified 88
13 3 Clostridia 2 Clostridiales 10 unclassified 89
14 4 Clostridiales 4 Lachnospiraceae 28 Peptostreptococcaceae 30 Ruminococcaceae 11 unclassified 90
15 5 Ruminococcaceae 4 Faecalibacterium 12 Pseudoflavonifractor 19 Subdoligranulum 53 unclassified 100
16 6 Faecalibacterium 1 unclassified 101
17 2 "Proteobacteria" 3 Betaproteobacteria 24 Gammaproteobacteria 14 unclassified 73
18 3 Gammaproteobacteria 3 "Enterobacteriales" 15 Pasteurellales 37 unclassified 78
19 4 "Enterobacteriales" 2 Enterobacteriaceae 16 unclassified 79
20 5 Enterobacteriaceae 5 Citrobacter 17 Enterobacter 20 Escherichia_Shigella 21 Klebsiella 18 unclassified 80
21 6 Citrobacter 1 unclassified 81
22 6 Klebsiella 1 unclassified 84
23 6 Pseudoflavonifractor 1 unclassified 102
24 6 Enterobacter 1 unclassified 82
25 6 Escherichia_Shigella 1 unclassified 83
26 5 Bacteroidaceae 2 Bacteroides 23 unclassified 71
27 6 Bacteroides 1 unclassified 72
28 3 Betaproteobacteria 2 Burkholderiales 25 unclassified 74
29 4 Burkholderiales 2 Sutterellaceae 26 unclassified 75
30 5 Sutterellaceae 2 Sutterella 27 unclassified 76
31 6 Sutterella 1 unclassified 77
32 5 Lachnospiraceae 7 Blautia 45 Clostridium_XlVa 51 Coprococcus 54 Dorea 46 Lachnospiracea_incertae_sedis 29 Roseburia 52 unclassified 91
33 6 Lachnospiracea_incertae_sedis 1 unclassified 96
34 5 Peptostreptococcaceae 2 Clostridium_XI 31 unclassified 98
35 6 Clostridium_XI 1 unclassified 99
36 2 "Actinobacteria" 2 Actinobacteria 33 unclassified 61
37 3 Actinobacteria 2 Bifidobacteriales 34 unclassified 62
38 4 Bifidobacteriales 2 Bifidobacteriaceae 35 unclassified 63
39 5 Bifidobacteriaceae 2 Bifidobacterium 36 unclassified 64
40 6 Bifidobacterium 1 unclassified 65
41 4 Pasteurellales 2 Pasteurellaceae 38 unclassified 85
42 5 Pasteurellaceae 2 Haemophilus 39 unclassified 86
43 6 Haemophilus 1 unclassified 87
44 2 TM7 2 TM7_class_incertae_sedis 41 unclassified 112
45 3 TM7_class_incertae_sedis 2 TM7_order_incertae_sedis 42 unclassified 113
46 4 TM7_order_incertae_sedis 2 TM7_family_incertae_sedis 43 unclassified 114
47 5 TM7_family_incertae_sedis 2 TM7_genus_incertae_sedis 44 unclassified 115
48 6 TM7_genus_incertae_sedis 1 unclassified 116
49 6 Blautia 1 unclassified 92
50 6 Dorea 1 unclassified 95
51 3 Negativicutes 2 Selenomonadales 48 unclassified 108
52 4 Selenomonadales 2 Acidaminococcaceae 49 unclassified 109
53 5 Acidaminococcaceae 2 Phascolarctobacterium 50 unclassified 110
54 6 Phascolarctobacterium 1 unclassified 111
55 6 Clostridium_XlVa 1 unclassified 93
56 6 Roseburia 1 unclassified 97
57 6 Subdoligranulum 1 unclassified 103
58 6 Coprococcus 1 unclassified 94
59 3 Erysipelotrichia 2 Erysipelotrichales 56 unclassified 104
60 4 Erysipelotrichales 2 Erysipelotrichaceae 57 unclassified 105
61 5 Erysipelotrichaceae 2 Turicibacter 58 unclassified 106
62 6 Turicibacter 1 unclassified 107
63 1 unclassified 1 unclassified 118
64 2 unclassified 1 unclassified 123
65 3 unclassified 1 unclassified 127
66 4 unclassified 1 unclassified 130
67 5 unclassified 1 unclassified 132
68 6 unclassified 0
69 7 unclassified 0
70 3 unclassified 1 unclassified 133
71 4 unclassified 1 unclassified 136
72 5 unclassified 1 unclassified 138
73 6 unclassified 0
74 7 unclassified 0
75 6 unclassified 0
76 7 unclassified 0
77 3 unclassified 1 unclassified 139
78 4 unclassified 1 unclassified 142
79 5 unclassified 1 unclassified 144
80 6 unclassified 0
81 7 unclassified 0
82 4 unclassified 1 unclassified 145
83 5 unclassified 1 unclassified 147
84 6 unclassified 0
85 7 unclassified 0
86 7 unclassified 0
87 7 unclassified 0
88 7 unclassified 0
89 5 unclassified 1 unclassified 148
90 6 unclassified 0
91 7 unclassified 0
92 3 unclassified 1 unclassified 149
93 4 unclassified 1 unclassified 152
94 5 unclassified 1 unclassified 154
95 6 unclassified 0
96 7 unclassified 0
97 7 unclassified 0
98 7 unclassified 0
99 7 unclassified 0
100 7 unclassified 0
101 7 unclassified 0
102 6 unclassified 0
103 7 unclassified 0
104 6 unclassified 0
105 7 unclassified 0
106 7 unclassified 0
107 7 unclassified 0
108 4 unclassified 1 unclassified 155
109 5 unclassified 1 unclassified 157
110 6 unclassified 0
111 7 unclassified 0
112 4 unclassified 1 unclassified 158
113 5 unclassified 1 unclassified 160
114 6 unclassified 0
115 7 unclassified 0
116 3 unclassified 1 unclassified 161
117 4 unclassified 1 unclassified 164
118 5 unclassified 1 unclassified 166
119 6 unclassified 0
120 7 unclassified 0
121 2 unclassified 1 unclassified 167
122 2 unclassified 1 unclassified 119
123 3 unclassified 1 unclassified 120
124 4 unclassified 1 unclassified 121
125 5 unclassified 1 unclassified 122
126 6 unclassified 0
127 3 unclassified 1 unclassified 124
128 4 unclassified 1 unclassified 125
129 5 unclassified 1 unclassified 126
130 6 unclassified 0
131 4 unclassified 1 unclassified 128
132 5 unclassified 1 unclassified 129
133 6 unclassified 0
134 5 unclassified 1 unclassified 131
135 6 unclassified 0
136 6 unclassified 0
137 4 unclassified 1 unclassified 134
138 5 unclassified 1 unclassified 135
139 6 unclassified 0
140 5 unclassified 1 unclassified 137
141 6 unclassified 0
142 6 unclassified 0
143 4 unclassified 1 unclassified 140
144 5 unclassified 1 unclassified 141
145 6 unclassified 0
146 5 unclassified 1 unclassified 143
147 6 unclassified 0
148 6 unclassified 0
149 5 unclassified 1 unclassified 146
150 6 unclassified 0
151 6 unclassified 0
152 6 unclassified 0
153 4 unclassified 1 unclassified 150
154 5 unclassified 1 unclassified 151
155 6 unclassified 0
156 5 unclassified 1 unclassified 153
157 6 unclassified 0
158 6 unclassified 0
159 5 unclassified 1 unclassified 156
160 6 unclassified 0
161 6 unclassified 0
162 5 unclassified 1 unclassified 159
163 6 unclassified 0
164 6 unclassified 0
165 4 unclassified 1 unclassified 162
166 5 unclassified 1 unclassified 163
167 6 unclassified 0
168 5 unclassified 1 unclassified 165
169 6 unclassified 0
170 6 unclassified 0
171 3 unclassified 1 unclassified 168
172 4 unclassified 1 unclassified 169
173 5 unclassified 1 unclassified 170
174 6 unclassified 0