diff tool-data/mothur_taxonomy.loc.sample @ 0:590cb2451872 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
author iuc
date Fri, 19 May 2017 05:22:17 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/mothur_taxonomy.loc.sample	Fri May 19 05:22:17 2017 -0400
@@ -0,0 +1,24 @@
+#This is a sample file distributed with Galaxy that enables tools
+#to use a directory of metagenomics files.  
+#file has this format (white space characters are TAB characters):
+#
+# Silva reference files:    http://www.mothur.org/wiki/Silva_reference_files
+#
+#<taxonomyname>	<file_base>
+#
+#archaea.gg	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.gg.tax
+#archaea.silva	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.silva.tax
+#archaea.rdp	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.rdp.tax
+#archaea.ncbi	/project/db/galaxy/mothur/Silva.archaea/silva.archaea.ncbi.tax
+#bacteria.gg	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.gg.tax
+#bacteria.silva	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.silva.tax
+#bacteria.ncbi	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.ncbi.tax
+#bacteria.rdp	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp.tax
+#bacteria.rdp6	/project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp6.tax
+#eukarya.silva	/project/db/galaxy/mothur/silva.eukarya.silva.tax
+#eukarya.ncbi	/project/db/galaxy/mothur/silva.eukarya.ncbi.tax
+#trainset6_032010.rdp.tax	/project/db/galaxy/mothur/RDP/trainset6_032010.rdp.tax
+#trainset7_112011.pds.tax	/project/db/galaxy/mothur/RDP/trainset7_112011.pds.tax
+#trainset7_112011.rdp.tax	/project/db/galaxy/mothur/RDP/trainset7_112011.rdp.tax
+#FungiLSU_train_1400bp_8506_mod.tax	/project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.tax
+#