Mercurial > repos > iuc > mothur_parse_list
diff test-data/abrecovery.pds.wang.tree.sum @ 0:14062c54b6f6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
| author | iuc |
|---|---|
| date | Fri, 19 May 2017 05:46:37 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/abrecovery.pds.wang.tree.sum Fri May 19 05:46:37 2017 -0400 @@ -0,0 +1,174 @@ +#1.36.1 +171 +6 +0 Root 3 Bacteria 2 unclassified 59 unknown 1 +1 unknown 1 unclassified 117 +1 Bacteria 6 "Actinobacteria" 32 "Bacteroidetes" 3 "Proteobacteria" 13 Firmicutes 8 TM7 40 unclassified 60 +2 "Bacteroidetes" 2 "Bacteroidia" 4 unclassified 66 +3 "Bacteroidia" 2 "Bacteroidales" 5 unclassified 67 +4 "Bacteroidales" 3 "Porphyromonadaceae" 6 Bacteroidaceae 22 unclassified 68 +5 "Porphyromonadaceae" 2 Parabacteroides 7 unclassified 69 +6 Parabacteroides 1 unclassified 70 +2 Firmicutes 4 Clostridia 9 Erysipelotrichia 55 Negativicutes 47 unclassified 88 +3 Clostridia 2 Clostridiales 10 unclassified 89 +4 Clostridiales 4 Lachnospiraceae 28 Peptostreptococcaceae 30 Ruminococcaceae 11 unclassified 90 +5 Ruminococcaceae 4 Faecalibacterium 12 Pseudoflavonifractor 19 Subdoligranulum 53 unclassified 100 +6 Faecalibacterium 1 unclassified 101 +2 "Proteobacteria" 3 Betaproteobacteria 24 Gammaproteobacteria 14 unclassified 73 +3 Gammaproteobacteria 3 "Enterobacteriales" 15 Pasteurellales 37 unclassified 78 +4 "Enterobacteriales" 2 Enterobacteriaceae 16 unclassified 79 +5 Enterobacteriaceae 5 Citrobacter 17 Enterobacter 20 Escherichia_Shigella 21 Klebsiella 18 unclassified 80 +6 Citrobacter 1 unclassified 81 +6 Klebsiella 1 unclassified 84 +6 Pseudoflavonifractor 1 unclassified 102 +6 Enterobacter 1 unclassified 82 +6 Escherichia_Shigella 1 unclassified 83 +5 Bacteroidaceae 2 Bacteroides 23 unclassified 71 +6 Bacteroides 1 unclassified 72 +3 Betaproteobacteria 2 Burkholderiales 25 unclassified 74 +4 Burkholderiales 2 Sutterellaceae 26 unclassified 75 +5 Sutterellaceae 2 Sutterella 27 unclassified 76 +6 Sutterella 1 unclassified 77 +5 Lachnospiraceae 7 Blautia 45 Clostridium_XlVa 51 Coprococcus 54 Dorea 46 Lachnospiracea_incertae_sedis 29 Roseburia 52 unclassified 91 +6 Lachnospiracea_incertae_sedis 1 unclassified 96 +5 Peptostreptococcaceae 2 Clostridium_XI 31 unclassified 98 +6 Clostridium_XI 1 unclassified 99 +2 "Actinobacteria" 2 Actinobacteria 33 unclassified 61 +3 Actinobacteria 2 Bifidobacteriales 34 unclassified 62 +4 Bifidobacteriales 2 Bifidobacteriaceae 35 unclassified 63 +5 Bifidobacteriaceae 2 Bifidobacterium 36 unclassified 64 +6 Bifidobacterium 1 unclassified 65 +4 Pasteurellales 2 Pasteurellaceae 38 unclassified 85 +5 Pasteurellaceae 2 Haemophilus 39 unclassified 86 +6 Haemophilus 1 unclassified 87 +2 TM7 2 TM7_class_incertae_sedis 41 unclassified 112 +3 TM7_class_incertae_sedis 2 TM7_order_incertae_sedis 42 unclassified 113 +4 TM7_order_incertae_sedis 2 TM7_family_incertae_sedis 43 unclassified 114 +5 TM7_family_incertae_sedis 2 TM7_genus_incertae_sedis 44 unclassified 115 +6 TM7_genus_incertae_sedis 1 unclassified 116 +6 Blautia 1 unclassified 92 +6 Dorea 1 unclassified 95 +3 Negativicutes 2 Selenomonadales 48 unclassified 108 +4 Selenomonadales 2 Acidaminococcaceae 49 unclassified 109 +5 Acidaminococcaceae 2 Phascolarctobacterium 50 unclassified 110 +6 Phascolarctobacterium 1 unclassified 111 +6 Clostridium_XlVa 1 unclassified 93 +6 Roseburia 1 unclassified 97 +6 Subdoligranulum 1 unclassified 103 +6 Coprococcus 1 unclassified 94 +3 Erysipelotrichia 2 Erysipelotrichales 56 unclassified 104 +4 Erysipelotrichales 2 Erysipelotrichaceae 57 unclassified 105 +5 Erysipelotrichaceae 2 Turicibacter 58 unclassified 106 +6 Turicibacter 1 unclassified 107 +1 unclassified 1 unclassified 118 +2 unclassified 1 unclassified 123 +3 unclassified 1 unclassified 127 +4 unclassified 1 unclassified 130 +5 unclassified 1 unclassified 132 +6 unclassified 0 +7 unclassified 0 +3 unclassified 1 unclassified 133 +4 unclassified 1 unclassified 136 +5 unclassified 1 unclassified 138 +6 unclassified 0 +7 unclassified 0 +6 unclassified 0 +7 unclassified 0 +3 unclassified 1 unclassified 139 +4 unclassified 1 unclassified 142 +5 unclassified 1 unclassified 144 +6 unclassified 0 +7 unclassified 0 +4 unclassified 1 unclassified 145 +5 unclassified 1 unclassified 147 +6 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +5 unclassified 1 unclassified 148 +6 unclassified 0 +7 unclassified 0 +3 unclassified 1 unclassified 149 +4 unclassified 1 unclassified 152 +5 unclassified 1 unclassified 154 +6 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +6 unclassified 0 +7 unclassified 0 +6 unclassified 0 +7 unclassified 0 +7 unclassified 0 +7 unclassified 0 +4 unclassified 1 unclassified 155 +5 unclassified 1 unclassified 157 +6 unclassified 0 +7 unclassified 0 +4 unclassified 1 unclassified 158 +5 unclassified 1 unclassified 160 +6 unclassified 0 +7 unclassified 0 +3 unclassified 1 unclassified 161 +4 unclassified 1 unclassified 164 +5 unclassified 1 unclassified 166 +6 unclassified 0 +7 unclassified 0 +2 unclassified 1 unclassified 167 +2 unclassified 1 unclassified 119 +3 unclassified 1 unclassified 120 +4 unclassified 1 unclassified 121 +5 unclassified 1 unclassified 122 +6 unclassified 0 +3 unclassified 1 unclassified 124 +4 unclassified 1 unclassified 125 +5 unclassified 1 unclassified 126 +6 unclassified 0 +4 unclassified 1 unclassified 128 +5 unclassified 1 unclassified 129 +6 unclassified 0 +5 unclassified 1 unclassified 131 +6 unclassified 0 +6 unclassified 0 +4 unclassified 1 unclassified 134 +5 unclassified 1 unclassified 135 +6 unclassified 0 +5 unclassified 1 unclassified 137 +6 unclassified 0 +6 unclassified 0 +4 unclassified 1 unclassified 140 +5 unclassified 1 unclassified 141 +6 unclassified 0 +5 unclassified 1 unclassified 143 +6 unclassified 0 +6 unclassified 0 +5 unclassified 1 unclassified 146 +6 unclassified 0 +6 unclassified 0 +6 unclassified 0 +4 unclassified 1 unclassified 150 +5 unclassified 1 unclassified 151 +6 unclassified 0 +5 unclassified 1 unclassified 153 +6 unclassified 0 +6 unclassified 0 +5 unclassified 1 unclassified 156 +6 unclassified 0 +6 unclassified 0 +5 unclassified 1 unclassified 159 +6 unclassified 0 +6 unclassified 0 +4 unclassified 1 unclassified 162 +5 unclassified 1 unclassified 163 +6 unclassified 0 +5 unclassified 1 unclassified 165 +6 unclassified 0 +6 unclassified 0 +3 unclassified 1 unclassified 168 +4 unclassified 1 unclassified 169 +5 unclassified 1 unclassified 170 +6 unclassified 0