Mercurial > repos > iuc > msa_datatypes
comparison readme.rst @ 0:70227007b991 draft default tip
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| author | iuc |
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| date | Tue, 22 Apr 2014 13:55:42 -0400 |
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| 1 =============================================================== | |
| 2 Collection of Galaxy Datatypes for Multiple Sequence Alignments | |
| 3 =============================================================== | |
| 4 | |
| 5 That repository should be a starting point to collect all Multiple Sequence Alignment (MSA) | |
| 6 file formats. | |
| 7 Development will happen in https://github.com/bgruening/galaxytools. Feel free to contribute. | |
| 8 | |
| 9 Copyright 2013 by: | |
| 10 | |
| 11 * Bjoern Gruening | |
| 12 | |
| 13 | |
| 14 ============ | |
| 15 Installation | |
| 16 ============ | |
| 17 | |
| 18 Please install these datatypes with the Galaxy Tool Shed: | |
| 19 | |
| 20 ================== | |
| 21 Included Datatypes | |
| 22 ================== | |
| 23 | |
| 24 - Stockholm* | |
| 25 - MSF | |
| 26 - phylib | |
| 27 - vienna | |
| 28 - selex | |
| 29 - clustal | |
| 30 | |
| 31 (*) with split/merge and counting functions | |
| 32 | |
| 33 | |
| 34 ======= | |
| 35 History | |
| 36 ======= | |
| 37 | |
| 38 - v1.1.0: Initial public release | |
| 39 | |
| 40 | |
| 41 | |
| 42 | |
| 43 =============================== | |
| 44 Wrapper Licence (MIT/BSD style) | |
| 45 =============================== | |
| 46 | |
| 47 Permission to use, copy, modify, and distribute this software and its | |
| 48 documentation with or without modifications and for any purpose and | |
| 49 without fee is hereby granted, provided that any copyright notices | |
| 50 appear in all copies and that both those copyright notices and this | |
| 51 permission notice appear in supporting documentation, and that the | |
| 52 names of the contributors or copyright holders not be used in | |
| 53 advertising or publicity pertaining to distribution of the software | |
| 54 without specific prior permission. | |
| 55 | |
| 56 THE CONTRIBUTORS AND COPYRIGHT HOLDERS OF THIS SOFTWARE DISCLAIM ALL | |
| 57 WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING ALL IMPLIED | |
| 58 WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL THE | |
| 59 CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY SPECIAL, INDIRECT | |
| 60 OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS | |
| 61 OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE | |
| 62 OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE | |
| 63 OR PERFORMANCE OF THIS SOFTWARE. | |
| 64 |