Mercurial > repos > iuc > multiqc
comparison readme.rst @ 0:3bad335ccea9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
| author | iuc |
|---|---|
| date | Tue, 24 Oct 2017 06:29:59 -0400 |
| parents | |
| children | b2f1f75d49c4 |
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| -1:000000000000 | 0:3bad335ccea9 |
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| 1 Galaxy MultiQC wrapper | |
| 2 ======================== | |
| 3 | |
| 4 Aggregate results from bioinformatics analyses across many samples into a single report | |
| 5 | |
| 6 MultiQC searches a given directory for analysis logs and compiles a HTML report. It's a general use tool, perfect for summarising the output from numerous bioinformatics tools. | |
| 7 | |
| 8 | |
| 9 Prevent displaying MultiQC webpage as gibberish | |
| 10 ----------------------------------------------- | |
| 11 | |
| 12 For Galaxy to display MultiQC's HTML output properly, you need to either: | |
| 13 | |
| 14 1. Deactivate the sanitize_all_html option in galaxy.ini (sanitize_all_html = False), or | |
| 15 2. Whitelist the tool in "Manage Display Whitelist" after installing | |
| 16 | |
| 17 Support new modules | |
| 18 ------------------- | |
| 19 | |
| 20 Currently, the wrapper supports the modules for tools found on the MTS. | |
| 21 To add new ones, you can look at the patterns at https://github.com/ewels/MultiQC/blob/master/multiqc/utils/search_patterns.yaml |