Mercurial > repos > iuc > multiqc

comparison test-data/post_aligner_soft_stats.tabular @ 0:3bad335ccea9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
author iuc
date Tue, 24 Oct 2017 06:29:59 -0400
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children 01237d721a9f
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-1:000000000000 0:3bad335ccea9
1 Sample QUAST_N50 QUAST_Total_length featureCounts_percent_assigned featureCounts_Assigned Picard_PCT_PF_READS_ALIGNED Prokka_organism Prokka_contigs Prokka_bases Prokka_CDS Bcftools Stats_number_of_records Bcftools Stats_number_of_SNPs Bcftools Stats_number_of_indels Bcftools Stats_tstv Bcftools Stats_number_of_MNPs Bamtools_duplicates_pct Bamtools_mapped_reads_pct Picard_PERCENT_DUPLICATION Picard_summed_median Picard_summed_mean GATK VariantEval_known_titv GATK VariantEval_novel_titv HTSeq Count_percent_assigned HTSeq Count_assigned Picard_PCT_RIBOSOMAL_BASES Picard_PCT_MRNA_BASES Samtools Flagstat_mapped_passed Samtools Stats_error_rate Samtools Stats_non_primary_alignments Samtools Stats_reads_mapped Samtools Stats_reads_mapped_percent Samtools Stats_raw_total_sequences Samblaster_pct_dups
2 14892_1#15 115136.0 18435361.0
3 70: TopHat on data 1, data 4, and data 3: accepted_hits 70.82267755353567 321797
4 75: TopHat on data 1, data 6, and data 5: accepted_hits 69.58585803304067 445012
5 80: TopHat on data 1, data 8, and data 7: accepted_hits 71.76957768385707 394981
6 85: TopHat on data 1, data 10, and data 9: accepted_hits 72.02454351337069 437485
7 90: TopHat on data 1, data 12, and data 11: accepted_hits 71.33130826437625 388170
8 95: TopHat on data 1, data 14, and data 13: accepted_hits 70.72517103678439 453929
9 D11_H4K16ac_Rep1_R1_fastq_gz 0.983085
10 Sample1 Helicobacter pylori 30 1629978 1548
11 Sample2 Escherichia coli 52 162997532523 1548
12 Test1 5522770.0 4474244.0 902934.0 1.97 72330.0
13 bamtools 0.0 93.125
14 dataset_114 0.005582
15 dataset_197 176 271.809759
16 gatk_varianteval 0.0 2.2
17 htseq 0.0 0
18 picard_CollectRnaSeqMetrics_bam 79.62310000000001
19 samtools_flagstat 20689039
20 samtools_stats 0.004248509 12111.0 641821.0 100.0 641821.0
21 virtual-normal 1.28