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comparison readme.rst @ 14:b2f1f75d49c4 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit fb0d9f3e89dc31e481f4bdb3e498a713f9e60def
author iuc
date Sat, 13 Apr 2019 08:30:21 -0400
parents 3bad335ccea9
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13:161f4383df15 14:b2f1f75d49c4
12 For Galaxy to display MultiQC's HTML output properly, you need to either: 12 For Galaxy to display MultiQC's HTML output properly, you need to either:
13 13
14 1. Deactivate the sanitize_all_html option in galaxy.ini (sanitize_all_html = False), or 14 1. Deactivate the sanitize_all_html option in galaxy.ini (sanitize_all_html = False), or
15 2. Whitelist the tool in "Manage Display Whitelist" after installing 15 2. Whitelist the tool in "Manage Display Whitelist" after installing
16 16
17 Problems with encodings
18 -----------------------
19
20 If you observe python Runtime errors because python3 is configured to use ASCII then set
21 `LC_ALL` and `LANG` in your job_conf.xml. See also https://github.com/galaxyproject/tools-iuc/issues/2362.
22
17 Support new modules 23 Support new modules
18 ------------------- 24 -------------------
19 25
20 Currently, the wrapper supports the modules for tools found on the MTS. 26 Currently, the wrapper supports the modules for tools found on the MTS.
21 To add new ones, you can look at the patterns at https://github.com/ewels/MultiQC/blob/master/multiqc/utils/search_patterns.yaml 27 To add new ones, you can look at the patterns at https://github.com/ewels/MultiQC/blob/master/multiqc/utils/search_patterns.yaml