Mercurial > repos > iuc > multiqc

comparison test-data/aligner_soft_stats.tabular @ 11:f0ec41881020 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit c9c5c4dd15aed950ed9b43a294ce6c41f5732a23
author iuc
date Mon, 06 Aug 2018 10:42:11 -0400
parents df99138d2776
children 1c2db0054039
comparison
equal deleted inserted replaced
10:ce0f144f4835 11:f0ec41881020
1 Sample Cutadapt_mqc-generalstats-percent_trimmed Kallisto_mqc-generalstats-percent_aligned Kallisto_mqc-generalstats-fragment_length Kallisto_mqc-generalstats-pseudoaligned_reads Bismark_mqc-generalstats-percent_aligned Bismark_mqc-generalstats-aligned_reads Bowtie 2_mqc-generalstats-overall_alignment_rate HiCExplorer_mqc-generalstats-Pairs_used HiCExplorer_mqc-generalstats-Min_rest_site_distance HiCExplorer_mqc-generalstats-Mapped HiCExplorer_mqc-generalstats-Max_rest_site_distance HiCExplorer_mqc-generalstats-Pairs_considered HISAT2_mqc-generalstats-overall_alignment_rate STAR_mqc-generalstats-uniquely_mapped STAR_mqc-generalstats-uniquely_mapped_percent Tophat_mqc-generalstats-aligned_not_multimapped_discordant Tophat_mqc-generalstats-overall_aligned_percent 1 Sample Cutadapt_mqc-generalstats-percent_trimmed Kallisto_mqc-generalstats-fragment_length Kallisto_mqc-generalstats-percent_aligned Kallisto_mqc-generalstats-pseudoaligned_reads Bismark_mqc-generalstats-aligned_reads Bismark_mqc-generalstats-percent_aligned Bowtie 2_mqc-generalstats-overall_alignment_rate HiCExplorer_mqc-generalstats-Pairs_considered HiCExplorer_mqc-generalstats-Pairs_used HiCExplorer_mqc-generalstats-Mapped HiCExplorer_mqc-generalstats-Min_rest_site_distance HiCExplorer_mqc-generalstats-Max_rest_site_distance HISAT2_mqc-generalstats-overall_alignment_rate STAR_mqc-generalstats-uniquely_mapped_percent STAR_mqc-generalstats-uniquely_mapped Tophat_mqc-generalstats-overall_aligned_percent Tophat_mqc-generalstats-aligned_not_multimapped_discordant MACS2_mqc-generalstats-d MACS2_mqc-generalstats-treatment_redundant_rate MACS2_mqc-generalstats-control_redundant_rate
2 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165 2 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1 5.880883098970165
3 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 83.65114569077758 167.866 48531088.0 3 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1 167.866 83.65114569077758 48531088.0
4 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073 4 HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2 31.038195169381073
5 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1 7.7267901650356645 5 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1 7.7267901650356645
6 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1 84.50278473550448 169.418 59280920.0 6 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1 169.418 84.50278473550448 59280920.0
7 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2 32.18485266309055 7 HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2 32.18485266309055
8 bismark_SE_report 69.71079996207212 220558.0 8 bismark_txt_SE_report 220558.0 69.71079996207212
9 bowtie2_1 98.33 9 bowtie2_1_txt 98.33
10 bowtie2_2 98.31 10 bowtie2_2_txt 98.31
11 hicexplorer_hicexplorer1_1_small_test 0.3732734564876029 303.0 0.08778492343698428 800.0 99983.0 11 hicexplorer_3_hicexplorer1_log_1_small_test 99983.0 0.3732734564876029 0.08778492343698428 303.0 800.0
12 hicexplorer_hicexplorer1_small_test 0.3732734564876029 303.0 0.08778492343698428 800.0 99983.0 12 hicexplorer_3_hicexplorer1_log_small_test 99983.0 0.3732734564876029 0.08778492343698428 303.0 800.0
13 hicexplorer_hicexplorer2_small_test_rf 0.35940109818669175 152.0 0.08778492343698428 1500.0 99983.0 13 hicexplorer_3_hicexplorer2_log_small_test_rf 99983.0 0.35940109818669175 0.08778492343698428 152.0 1500.0
14 hisat2_1 96.15 14 hisat2_1_txt 96.15
15 hisat2_2 96.15 15 hisat2_2_txt 96.15
16 star_log 89.0 89.0 16 star_log_txt 89.0 89.0
17 tophat_align 307733.0 99.5 17 tophat_txtalign 99.5 307733.0
18 treat1 254.0 0.0 0.0
19 treat2 254.0 0.0 0.0