Mercurial > repos > iuc > multiqc

diff test-data/aligner_soft_stats.tabular @ 6:01237d721a9f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit d9175b08720c657b7a4521472450dd5ac6fd9361
author iuc
date Sat, 23 Dec 2017 15:57:55 -0500
parents 3bad335ccea9
children e0f4a651c6b9
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--- a/test-data/aligner_soft_stats.tabular	Tue Dec 05 05:24:03 2017 -0500
+++ b/test-data/aligner_soft_stats.tabular	Sat Dec 23 15:57:55 2017 -0500
@@ -1,14 +1,16 @@
-Sample	Cutadapt_percent_trimmed	Kallisto_fragment_length	Kallisto_percent_aligned	Kallisto_pseudoaligned_reads	Bismark_aligned_reads	Bismark_percent_aligned	Bowtie 2_overall_alignment_rate	HISAT2_overall_alignment_rate	STAR_uniquely_mapped_percent	STAR_uniquely_mapped	Tophat_overall_aligned_percent	Tophat_aligned_not_multimapped_discordant
-HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1	5.880883098970165											
-HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1		167.866	83.65114569077758	48531088.0								
-HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2	31.038195169381073											
-HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1	7.7267901650356645											
-HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1		169.418	84.50278473550448	59280920.0								
-HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2	32.18485266309055											
-bismark_SE_report					220558.0	69.71079996207212						
-bowtie2_1							98.33					
-bowtie2_2							98.31					
-hisat2_1								96.15				
-hisat2_2								96.15				
-star_log									89.0	89.0		
-tophat_align											99.5	307733.0
+Sample	Cutadapt_percent_trimmed-1	Kallisto_percent_aligned-1-1	Kallisto_pseudoaligned_reads-1	Kallisto_fragment_length-1	Bismark_aligned_reads-1	Bismark_percent_aligned-2	Bowtie 2_overall_alignment_rate-1-1	HiCExplorer_Pairs_considered-1	HiCExplorer_Min_rest_site_distance-1	HiCExplorer_Mapped-1	HiCExplorer_Max_rest_site_distance-1	HiCExplorer_Pairs_used-1	HISAT2_overall_alignment_rate-2	STAR_uniquely_mapped_percent-1	STAR_uniquely_mapped-1	Tophat_overall_aligned_percent-1	Tophat_aligned_not_multimapped_discordant-1
+HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1	5.880883098970165																
+HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R1_val_1		83.65114569077758	48531088.0	167.866													
+HS002-PE-R00059_BD0U5YACXX.RHM066_CGATGT_L002_R2	31.038195169381073																
+HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1	7.7267901650356645																
+HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R1_val_1		84.50278473550448	59280920.0	169.418													
+HS002-PE-R00059_BD0U5YACXX.RHM067_CAGATC_L002_R2	32.18485266309055																
+align_0					220558.0	69.71079996207212											
+bowtie2_1							98.33										
+bowtie2_2							98.31										
+hicexplorer_3_small_test								99983.0	303.0	0.08778492343698428	800.0	0.3732734564876029					
+hicexplorer_3_small_test_rf								99983.0	152.0	0.08778492343698428	1500.0	0.35940109818669175					
+hisat2_1													96.15				
+hisat2_2													96.15				
+star_log														89.0	89.0		
+tophat																99.5	307733.0